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69_002_scaffold_65

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_002_scaffold_65_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3..419
DNA (417bp) protein (139aa)
glutathione peroxidase; K00432 glutathione peroxidase [EC:1.11.1.9]
Glutathione peroxidase n=22 Tax=Staphylococcus epidermidis RepID=C5QWS1_STAEP
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
69_002_scaffold_65_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(638..877)
DNA (240bp) protein (80aa)
RNA-binding protein Hfq n=70 Tax=Staphylococcus epidermidis RepID=Q5HPN7_STAEQ
host factor-1; K03666 host factor-I protein
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
69_002_scaffold_65_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(831..1829)
DNA (999bp) protein (333aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; tRNA dimethylallyltransferase; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75]
tRNA dimethylallyltransferase n=3 Tax=Staphylococcus epidermidis RepID=H3WR59_STAEP
69_002_scaffold_65_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1841..2782)
DNA (942bp) protein (314aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Staphylococcus epidermidis W23144 RepID=C5QWR8_STAEP
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EES36324.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
alpha/beta hydrolase
69_002_scaffold_65_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2989..4662)
DNA (1674bp) protein (558aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
glpD; aerobic glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
FAD dependent oxidoreductase n=20 Tax=Staphylococcus epidermidis RepID=C5QWR7_STAEP
69_002_scaffold_65_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4839..6338)
DNA (1500bp) protein (500aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerol kinase; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
glpK; glycerol kinase (EC:2.7.1.30); K00864 glycerol kinase [EC:2.7.1.30]
Glycerol kinase n=7 Tax=Staphylococcus epidermidis RepID=C5QWR6_STAEP
69_002_scaffold_65_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6492..7316)
DNA (825bp) protein (275aa)
MIP family channel protein n=25 Tax=Staphylococcus epidermidis RepID=C5QWR5_STAEP
Glycerol transporter {ECO:0000313|EMBL:ESV19327.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
glycerol uptake facilitator; K02440 glycerol uptake facilitator protein
69_002_scaffold_65_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7687..8220)
DNA (534bp) protein (178aa)
Glycerol-3-phosphate responsive antiterminator n=18 Tax=Staphylococcus epidermidis RepID=C5QWR4_STAEP
Glycerol uptake operon antiterminator regulatory protein {ECO:0000256|PIRNR:PIRNR016897}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
glpP; glycerol uptake operon antiterminator regulatory protein; K02443 glycerol uptake operon antiterminator
69_002_scaffold_65_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8234..10171)
DNA (1938bp) protein (646aa)
DNA mismatch repair protein MutL n=3 Tax=Staphylococcus epidermidis RepID=C5QWR3_STAEP
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
mutL; DNA mismatch repair protein; K03572 DNA mismatch repair protein MutL
69_002_scaffold_65_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10186..12807)
DNA (2622bp) protein (874aa)
DNA mismatch repair protein MutS n=5 Tax=Staphylococcus epidermidis RepID=C5QWR2_STAEP
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hexA; DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS
69_002_scaffold_65_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13005..13499)
DNA (495bp) protein (165aa)
Uncharacterized protein n=75 Tax=Staphylococcus epidermidis RepID=Q5HPP6_STAEQ
hypothetical protein
Protein ThiW {ECO:0000313|EMBL:EES36317.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
69_002_scaffold_65_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13523..13888)
DNA (366bp) protein (122aa)
Uncharacterized protein n=45 Tax=Staphylococcus epidermidis RepID=Q5HPP7_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES36316.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
69_002_scaffold_65_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13890..15434)
DNA (1545bp) protein (515aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=6 Tax=Staphylococcus epidermidis RepID=C5QWQ9_STAEP
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA
69_002_scaffold_65_14
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15777..16067)
DNA (291bp) protein (97aa)
Uncharacterized protein n=78 Tax=Staphylococcus epidermidis RepID=Q5HPP9_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ12325.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
69_002_scaffold_65_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16124..16741)
DNA (618bp) protein (206aa)
Uncharacterized protein n=3 Tax=Staphylococcus epidermidis RepID=C5QWQ7_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES36313.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
69_002_scaffold_65_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17335..18201)
DNA (867bp) protein (289aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3]
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=3 Tax=Staphylococcus epidermidis RepID=C5QWQ6_STAEP
2-oxoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:EES36312.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
69_002_scaffold_65_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18202..19962)
DNA (1761bp) protein (587aa)
2-oxoacid ferredoxin oxidoreductase subunit alpha; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3]
2-oxoacid:acceptor oxidoreductase, alpha subunit n=6 Tax=Staphylococcus epidermidis RepID=C5QWQ5_STAEP
2-oxoacid:acceptor oxidoreductase, alpha subunit {ECO:0000313|EMBL:EES36311.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
69_002_scaffold_65_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20075..20869)
DNA (795bp) protein (265aa)
Uncharacterized protein n=23 Tax=Staphylococcus epidermidis RepID=S7LV50_STAEP
Putative metallophosphoesterase {ECO:0000313|EMBL:EES36310.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein; K09769 hypothetical protein
69_002_scaffold_65_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21032..21247
DNA (216bp) protein (72aa)
Uncharacterized protein n=21 Tax=Staphylococcus epidermidis RepID=C5QWQ3_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ESV19315.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
69_002_scaffold_65_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21336..22895)
DNA (1560bp) protein (520aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Ribonuclease Y n=75 Tax=Staphylococcus RepID=RNY_STAEQ
phosphodiesterase; K06950 uncharacterized protein
69_002_scaffold_65_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(23121..24170)
DNA (1050bp) protein (350aa)
Protein RecA n=64 Tax=Staphylococcus epidermidis RepID=RECA_STAEQ
recA; recombinase A; K03553 recombination protein RecA
Protein RecA {ECO:0000255|HAMAP-Rule:MF_00268}; Recombinase A {ECO:0000255|HAMAP-Rule:MF_00268}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
69_002_scaffold_65_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24341..25486)
DNA (1146bp) protein (382aa)
Competence protein CinA n=11 Tax=Staphylococcus epidermidis RepID=V6QQ28_STAEP
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
competence/damage-inducible protein CinA; K03742 competence/damage-inducible protein CinA
69_002_scaffold_65_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25934..26515)
DNA (582bp) protein (194aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5); K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=19 Tax=Staphylococcus epidermidis RepID=F9LHL5_STAEP
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:ESV19311.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
69_002_scaffold_65_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26544..26936)
DNA (393bp) protein (131aa)
DNA-binding helix-turn-helix protein n=2 Tax=Staphylococcus epidermidis RepID=H0DYA9_STAEP
Cro/CI family transcriptional regulator
Transcriptional regulator, Cro/CI family {ECO:0000313|EMBL:EES36304.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
69_002_scaffold_65_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26955..27782)
DNA (828bp) protein (276aa)
ACT domain protein n=13 Tax=Staphylococcus epidermidis RepID=C5QWP7_STAEP
ACT domain protein {ECO:0000313|EMBL:EES36303.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
69_002_scaffold_65_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27936..28640)
DNA (705bp) protein (235aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EES36302.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EES36302.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
short chain dehydrogenase/reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
Oxidoreductase, short chain dehydrogenase/reductase family protein n=8 Tax=Staphylococcus epidermidis RepID=C5QWP6_STAEP
69_002_scaffold_65_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28637..29926)
DNA (1290bp) protein (430aa)
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EES36301.1}; EC=3.4.24.- {ECO:0000313|EMBL:EES36301.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Peptidase M16 inactive domain protein n=6 Tax=Staphylococcus epidermidis RepID=C5QWP5_STAEP
M16 family peptidase
69_002_scaffold_65_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29926..31197)
DNA (1272bp) protein (424aa)
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EES36300.1}; EC=3.4.24.- {ECO:0000313|EMBL:EES36300.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Peptidase M16 inactive domain protein n=5 Tax=Staphylococcus epidermidis RepID=C5QWP4_STAEP
hypothetical protein
69_002_scaffold_65_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31227..31940)
DNA (714bp) protein (238aa)
UbiC transcription regulator-associated domain protein n=7 Tax=Staphylococcus epidermidis RepID=C5QWP3_STAEP
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EES36299.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
transcriptional regulator
69_002_scaffold_65_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31943..34336)
DNA (2394bp) protein (798aa)
FtsK/SpoIIIE family protein n=5 Tax=Staphylococcus epidermidis RepID=C5QWP2_STAEP
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EES36298.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
Displaying items 1-30 of 35 in total

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