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69_002_scaffold_89

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_002_scaffold_89_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3..386)
DNA (384bp) protein (128aa)
ABC transporter ATP-binding protein; K09693 teichoic acid transport system ATP-binding protein [EC:3.6.3.40]
ABC transporter, ATP-binding protein n=1 Tax=Staphylococcus epidermidis VCU128 RepID=H3WJ44_STAEP
Teichoic acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESV19971.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
69_002_scaffold_89_2

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comp(402..716)
DNA (315bp) protein (105aa)
Uncharacterized protein n=75 Tax=Staphylococcus epidermidis RepID=Q8CRW0_STAES
hypothetical protein
Conserved protein YfhH {ECO:0000313|EMBL:ETJ21412.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
69_002_scaffold_89_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(709..1512)
DNA (804bp) protein (268aa)
Regulatory protein RecX n=17 Tax=Staphylococcus epidermidis RepID=C5QU94_STAEP
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
recX; recombination regulator RecX; K03565 regulatory protein
69_002_scaffold_89_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1791..2600)
DNA (810bp) protein (270aa)
Monofunctional glycosyltransferase {ECO:0000256|HAMAP-Rule:MF_01434}; Short=MGT {ECO:0000256|HAMAP-Rule:MF_01434};; EC=2.4.-.- {ECO:0000256|HAMAP-Rule:MF_01434};; Peptidoglycan TGase {ECO:0000256|HAMAP-Rule:MF_01434}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
glycosyltransferase; K04478 monofunctional glycosyltransferase [EC:2.4.1.-]
Monofunctional glycosyltransferase n=18 Tax=Staphylococcus epidermidis RepID=E6JQL4_STAEP
69_002_scaffold_89_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2924..3442)
DNA (519bp) protein (173aa)
hypothetical protein; K05520 protease I [EC:3.2.-.-]
Intracellular protease, PfpI family n=28 Tax=Staphylococcus epidermidis RepID=C5QU96_STAEP
General stress protein {ECO:0000313|EMBL:ESV19975.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
69_002_scaffold_89_6
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3742..3903)
DNA (162bp) protein (54aa)
Uncharacterized protein n=86 Tax=Staphylococcus RepID=L7WV60_STAWS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC90239.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
69_002_scaffold_89_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4062..5204
DNA (1143bp) protein (381aa)
YfkB-like domain protein n=15 Tax=Staphylococcus epidermidis RepID=C5QU98_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ESV19977.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
radical SAM domain-containing protein
69_002_scaffold_89_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5340..5870)
DNA (531bp) protein (177aa)
Thioesterase family protein n=28 Tax=Staphylococcus epidermidis RepID=C5QU99_STAEP
hypothetical protein
Thioesterase family protein {ECO:0000313|EMBL:EES37117.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
69_002_scaffold_89_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5951..7192)
DNA (1242bp) protein (414aa)
aminopeptidase; K01269 aminopeptidase [EC:3.4.11.-]
Aminopeptidase pepS n=5 Tax=Staphylococcus epidermidis RepID=E6JQL9_STAEP
Thermophilic metalloprotease (M29) {ECO:0000313|EMBL:EES37118.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
69_002_scaffold_89_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7194..7409)
DNA (216bp) protein (72aa)
UPF0435 protein SE_1565 n=77 Tax=Staphylococcus epidermidis RepID=Y1565_STAES
hypothetical protein
UPF0435 protein M464_0208985 {ECO:0000256|HAMAP-Rule:MF_00829}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
69_002_scaffold_89_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7551..8015
DNA (465bp) protein (155aa)
phosphotyrosine protein phosphatase (EC:3.1.3.48); K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
Low molecular weight protein-tyrosine-phosphatase PtpA; EC=3.1.3.48;; Phosphotyrosine phosphatase A; Short=PTPase A;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Low molecular weight phosphotyrosine phosphatase family protein n=2 Tax=Staphylococcus epidermidis RepID=E6JQM1_STAEP
69_002_scaffold_89_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8023..8307
DNA (285bp) protein (95aa)
Uncharacterized protein n=24 Tax=Staphylococcus epidermidis RepID=C5QUA3_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ESV19982.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
69_002_scaffold_89_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8713..9891
DNA (1179bp) protein (393aa)
YihY family protein n=1 Tax=Staphylococcus epidermidis FRI909 RepID=E6JQM3_STAEP
Ribonuclease BN {ECO:0000313|EMBL:ESV19983.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
ribonuclease BN; K07058 membrane protein
69_002_scaffold_89_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9948..10577)
DNA (630bp) protein (210aa)
Response regulator protein VraR n=12 Tax=Staphylococcus epidermidis RepID=H0DNU3_STAEP
Response regulator protein VraR {ECO:0000313|EMBL:EES37123.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
vraR; DNA-binding response regulator VraR; K07694 two-component system, NarL family, vancomycin resistance associated response regulator VraR
69_002_scaffold_89_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10567..11613)
DNA (1047bp) protein (349aa)
Sensor protein VraS {ECO:0000256|PIRNR:PIRNR037431}; EC=2.7.13.3 {ECO:0000256|PIRNR:PIRNR037431};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
two-component sensor histidine kinase; K07681 two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS [EC:2.7.13.3]
Sensor protein VraS n=23 Tax=Staphylococcus epidermidis RepID=C5QUA6_STAEP
69_002_scaffold_89_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11610..12311)
DNA (702bp) protein (234aa)
Uncharacterized protein n=26 Tax=Staphylococcus epidermidis RepID=C5QUA7_STAEP
Transporter {ECO:0000313|EMBL:ESV19986.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
69_002_scaffold_89_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12326..12712)
DNA (387bp) protein (129aa)
Uncharacterized protein n=5 Tax=Staphylococcus epidermidis RepID=J0EZA4_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ESV19987.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
69_002_scaffold_89_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12870..13625)
DNA (756bp) protein (252aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
map; methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18]
Methionine aminopeptidase n=26 Tax=Staphylococcus epidermidis RepID=C5QUA9_STAEP
69_002_scaffold_89_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13799..14785
DNA (987bp) protein (329aa)
Uncharacterized protein n=12 Tax=Staphylococcus epidermidis RepID=C5QUB0_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES37128.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
69_002_scaffold_89_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14937..15473)
DNA (537bp) protein (179aa)
Uncharacterized protein n=24 Tax=Staphylococcus epidermidis RepID=C5QUB1_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ESV19990.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
69_002_scaffold_89_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15914..16639)
DNA (726bp) protein (242aa)
Cobyric acid synthase, putative n=63 Tax=Staphylococcus epidermidis RepID=Q5HN43_STAEQ
cobyric acid synthase; K07009
Glutamine amidotransferase {ECO:0000313|EMBL:ESV19991.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
69_002_scaffold_89_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16641..17954)
DNA (1314bp) protein (438aa)
Mur ligase middle domain protein n=8 Tax=Staphylococcus epidermidis RepID=C5QUB3_STAEP
Mur ligase middle domain protein {ECO:0000313|EMBL:EES37131.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Mur ligase
69_002_scaffold_89_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18176..18673
DNA (498bp) protein (166aa)
ferritin; K02217 ferritin [EC:1.16.3.1]
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Ferritin n=70 Tax=Staphylococcus epidermidis RepID=FTN_STAES
69_002_scaffold_89_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18866..19420
DNA (555bp) protein (185aa)
exonuclease; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
Exonuclease n=7 Tax=Staphylococcus epidermidis RepID=C5QUB5_STAEP
Exonuclease {ECO:0000313|EMBL:EES37133.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
69_002_scaffold_89_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19451..20521)
DNA (1071bp) protein (357aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
DNA polymerase IV; K02346 DNA polymerase IV [EC:2.7.7.7]
DNA polymerase IV n=5 Tax=Staphylococcus epidermidis RepID=C5QUB6_STAEP
69_002_scaffold_89_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20834..21376)
DNA (543bp) protein (181aa)
Uncharacterized protein n=2 Tax=Staphylococcus epidermidis RepID=J0YY59_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES37135.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
69_002_scaffold_89_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21520..22938)
DNA (1419bp) protein (473aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EES37136.1}; EC=2.1.1.- {ECO:0000313|EMBL:EES37136.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
RNA methyltransferase-like protein; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Staphylococcus epidermidis W23144 RepID=C5QUB8_STAEP
69_002_scaffold_89_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22980..23930)
DNA (951bp) protein (317aa)
Diacylglycerol kinase family protein n=17 Tax=Staphylococcus epidermidis RepID=E6JQN7_STAEP
Lipid kinase {ECO:0000313|EMBL:ESV19998.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
lipid kinase; K07029
69_002_scaffold_89_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24155..25582)
DNA (1428bp) protein (476aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000255|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000255|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_00121};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=51 Tax=Staphylococcus epidermidis RepID=GATB_STAEQ
69_002_scaffold_89_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25595..27052)
DNA (1458bp) protein (486aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000255|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000255|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000255|HAMAP-Rule:MF_00120};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
Glutamyl-tRNA(Gln) amidotransferase subunit A n=41 Tax=Staphylococcus epidermidis RepID=GATA_STAES
Displaying items 1-30 of 35 in total

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