ggKbase home page

69_002_scaffold_165

Search features with annotation key words

Displaying 12 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_002_scaffold_165_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3..9983)
DNA (9981bp) protein (3327aa)
Gram-positive signal peptide protein, YSIRK family n=1 Tax=Staphylococcus epidermidis VCU118 RepID=H3V5Y9_STAEP
Cell wall surface anchor protein {ECO:0000313|EMBL:ESV19842.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
FmtB protein
69_002_scaffold_165_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10388..10699)
DNA (312bp) protein (104aa)
Rhodanese-like domain protein n=79 Tax=Staphylococcus epidermidis RepID=Q5HNF2_STAEQ
rhodanese-like domain-containing protein
Rhodanese-like protein {ECO:0000313|EMBL:EES35787.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
69_002_scaffold_165_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(10725..13142)
DNA (2418bp) protein (806aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase n=1 Tax=Staphylococcus epidermidis W23144 RepID=C5QY01_STAEP
69_002_scaffold_165_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13431..14645)
DNA (1215bp) protein (405aa)
Major Facilitator Superfamily protein n=1 Tax=Staphylococcus epidermidis FRI909 RepID=E6JN00_STAEP
Transporter, major facilitator family protein {ECO:0000313|EMBL:EES35789.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
multidrug resistance protein-like protein
69_002_scaffold_165_5

Not on your lists

14752..15705
DNA (954bp) protein (318aa)
Radical SAM protein, TIGR01212 family n=1 Tax=Staphylococcus epidermidis NIHLM057 RepID=J0F4K8_STAEP
hypothetical protein; K07139
Radical SAM protein {ECO:0000313|EMBL:ETJ20585.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
69_002_scaffold_165_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15702..16265
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Staphylococcus epidermidis RepID=J0NU63_STAEP
rRNA methyltransferase {ECO:0000313|EMBL:ESV19837.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
69_002_scaffold_165_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16533..16943)
DNA (411bp) protein (137aa)
HTH-type transcriptional regulator rot n=13 Tax=Staphylococcus epidermidis RepID=C5QY05_STAEP
HTH-type transcriptional regulator rot {ECO:0000256|PIRNR:PIRNR032474}; Repressor of toxins {ECO:0000256|PIRNR:PIRNR032474}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
rot; repressor of toxins
69_002_scaffold_165_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17425..18252)
DNA (828bp) protein (276aa)
Uncharacterized protein n=8 Tax=Staphylococcus epidermidis RepID=C5QY06_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES35793.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
lysophospholipase
69_002_scaffold_165_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18495..19496
DNA (1002bp) protein (334aa)
putA; proline dehydrogenase (EC:1.5.99.8); K00318 proline dehydrogenase [EC:1.5.99.8]
Proline dehydrogenase n=17 Tax=Staphylococcus epidermidis RepID=C5QY07_STAEP
Proline dehydrogenase {ECO:0000313|EMBL:ESV19834.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
69_002_scaffold_165_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19543..20004)
DNA (462bp) protein (154aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
ribH; 6,7-dimethyl-8-ribityllumazine synthase; K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
6,7-dimethyl-8-ribityllumazine synthase n=21 Tax=Staphylococcus epidermidis RepID=C5QY08_STAEP
69_002_scaffold_165_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20017..21198)
DNA (1182bp) protein (394aa)
riboflavin biosynthesis protein; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
Riboflavin biosynthesis protein RibBA n=1 Tax=Staphylococcus epidermidis FRI909 RepID=E6JN07_STAEP
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
69_002_scaffold_165_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21211..21843)
DNA (633bp) protein (211aa)
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:ESV19831.1}; EC=2.5.1.9 {ECO:0000313|EMBL:ESV19831.1};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9]
Riboflavin synthase, alpha subunit n=4 Tax=Staphylococcus epidermidis RepID=H0DT31_STAEP
Displaying 12 items

View Taxonomy