ggKbase home page

69_002_scaffold_280

Search features with annotation key words

Displaying 14 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_002_scaffold_280_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3..335)
DNA (333bp) protein (111aa)
Uncharacterized protein n=15 Tax=Staphylococcus epidermidis RepID=Q8CSJ5_STAES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES36173.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
69_002_scaffold_280_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(467..1603)
DNA (1137bp) protein (379aa)
hypothetical protein; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
Uncharacterized protein n=13 Tax=Staphylococcus epidermidis RepID=J0G9I9_STAEP
RNA methyltransferase {ECO:0000313|EMBL:ESV19471.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
69_002_scaffold_280_3
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2246..2656)
DNA (411bp) protein (137aa)
Cell cycle protein GpsB n=3 Tax=Staphylococcus epidermidis RepID=C5Q981_STAEP
Cell cycle protein GpsB {ECO:0000256|HAMAP-Rule:MF_02011, ECO:0000256|SAAS:SAAS00023627}; Guiding PBP1-shuttling protein {ECO:0000256|HAMAP-Rule:MF_02011}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Cell division initiation protein DivIVA
69_002_scaffold_280_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2598..3164)
DNA (567bp) protein (189aa)
UPF0398 protein HMPREF9956_1172 n=2 Tax=Staphylococcus epidermidis RepID=H0DU61_STAEP
hypothetical protein
UPF0398 protein HMPREF0791_1254 {ECO:0000256|HAMAP-Rule:MF_01575}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
69_002_scaffold_280_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3176..3508)
DNA (333bp) protein (111aa)
Uncharacterized protein n=17 Tax=Staphylococcus epidermidis RepID=E6JM86_STAEP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV19474.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
69_002_scaffold_280_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3849..4478
DNA (630bp) protein (210aa)
Holliday junction resolvase RecU {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056687}; EC=3.1.22.- {ECO:0000256|HAMAP-Rule:MF_00130, ECO:0000256|SAAS:SAAS00056689};; Recombination protein U homolog {ECO:0000256|HAMAP-Rule:MF_00130}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Holliday junction resolvase RecU n=17 Tax=Staphylococcus epidermidis RepID=C5Q984_STAEP
recU; Holliday junction-specific endonuclease; K03700 recombination protein U
69_002_scaffold_280_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4475..6706
DNA (2232bp) protein (744aa)
pbp2; penicillin-binding protein 2; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-]
Transglycosylase n=1 Tax=Staphylococcus epidermidis VCU128 RepID=H3WGF8_STAEP
Transglycosylase {ECO:0000313|EMBL:ESV19476.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
69_002_scaffold_280_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6891..7223)
DNA (333bp) protein (111aa)
Uncharacterized protein n=23 Tax=Staphylococcus epidermidis RepID=E6JM89_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ESV19477.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
69_002_scaffold_280_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7228..7887)
DNA (660bp) protein (220aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
nth; endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18]
Endonuclease III n=20 Tax=Staphylococcus epidermidis RepID=C5QX66_STAEP
69_002_scaffold_280_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7877..8563)
DNA (687bp) protein (229aa)
DnaD domain protein n=27 Tax=Staphylococcus epidermidis RepID=C5QX67_STAEP
Chromosome replication protein DnaD {ECO:0000313|EMBL:ESV19479.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
DNA replication protein DnaD; K02086 DNA replication protein
69_002_scaffold_280_11

Not on your lists

comp(8657..9949)
DNA (1293bp) protein (431aa)
asnC; asparaginyl-tRNA synthetase (EC:6.1.1.22); K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22]
Asparagine--tRNA ligase n=48 Tax=Staphylococcus epidermidis RepID=SYN_STAEQ
Asparagine-tRNA ligase {ECO:0000313|EMBL:ETJ18652.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
69_002_scaffold_280_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10070..12778)
DNA (2709bp) protein (903aa)
dinG protein; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12]
Exonuclease DnaQ family/helicase DinG family n=1 Tax=Staphylococcus epidermidis VCU128 RepID=H3WGG3_STAEP
Putative DnaQ family exonuclease/DinG family helicase {ECO:0000313|EMBL:EES36184.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
69_002_scaffold_280_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12803..13774)
DNA (972bp) protein (324aa)
birA; birA bifunctional protein; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
Biotin--[acetyl-CoA-carboxylase] ligase n=14 Tax=Staphylococcus epidermidis RepID=H0DUA3_STAEP
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
69_002_scaffold_280_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13761..14969)
DNA (1209bp) protein (403aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01263}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01263};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01263}; tRNA CCA-pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01263}; tRNA adenylyl-/cytidylyl- transferase {ECO:0000256|HAMAP-Rule:MF_01263}; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01263}; tRNA-NT {ECO:0000256|HAMAP-Rule:MF_01263}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococ
papS; tRNA CCA-pyrophosphorylase (EC:2.7.7.21 2.7.7.25); K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
CCA-adding enzyme n=1 Tax=Staphylococcus epidermidis VCU128 RepID=H3WGG5_STAEP
Displaying 14 items

View Taxonomy