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69_002_scaffold_466

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_002_scaffold_466_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2..607)
DNA (606bp) protein (202aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
glyA; serine hydroxymethyltransferase (EC:2.1.2.1); K00600 glycine hydroxymethyltransferase [EC:2.1.2.1]
Serine hydroxymethyltransferase n=6 Tax=Staphylococcus epidermidis RepID=C5QTQ2_STAEP
69_002_scaffold_466_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(632..1156)
DNA (525bp) protein (175aa)
UPF0340 protein HMPREF0791_0046 n=3 Tax=Staphylococcus epidermidis RepID=C5QTQ3_STAEP
UPF0340 protein HMPREF0791_0046 {ECO:0000256|HAMAP-Rule:MF_00800}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
69_002_scaffold_466_3
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1266..1685)
DNA (420bp) protein (140aa)
phosphotyrosine protein phosphatase (EC:3.1.3.48); K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
Low molecular weight protein-tyrosine-phosphatase PtpB n=39 Tax=Staphylococcus epidermidis RepID=PTPB_STAEQ
Low molecular weight protein-tyrosine-phosphatase ptpB {ECO:0000313|EMBL:ETJ13752.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
69_002_scaffold_466_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1682..2725)
DNA (1044bp) protein (348aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Sua5/YciO/YrdC/YwlC family protein n=51 Tax=Staphylococcus epidermidis RepID=Q5HMA7_STAEQ
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein
69_002_scaffold_466_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2888..3724)
DNA (837bp) protein (279aa)
HemK family modification methylase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidi
Release factor glutamine methyltransferase n=32 Tax=Staphylococcus RepID=Q5HMA5_STAEQ
69_002_scaffold_466_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3711..4787)
DNA (1077bp) protein (359aa)
Peptide chain release factor 1 n=49 Tax=Staphylococcus epidermidis RepID=RF1_STAEQ
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
69_002_scaffold_466_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4787..5386)
DNA (600bp) protein (200aa)
thymidine kinase (EC:2.7.1.21); K00857 thymidine kinase [EC:2.7.1.21]
Thymidine kinase {ECO:0000255|HAMAP-Rule:MF_00124}; EC=2.7.1.21 {ECO:0000255|HAMAP-Rule:MF_00124};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Thymidine kinase n=34 Tax=Staphylococcus epidermidis RepID=KITH_STAEQ
69_002_scaffold_466_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5673..5930)
DNA (258bp) protein (86aa)
50S ribosomal protein L31 type B n=81 Tax=Staphylococcus epidermidis RepID=RL31B_STAEQ
rpmE2; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
69_002_scaffold_466_9
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6047..7363)
DNA (1317bp) protein (439aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Transcription termination factor Rho n=54 Tax=Staphylococcus epidermidis RepID=Q5HMA1_STAEQ
rho; transcription termination factor Rho; K03628 transcription termination factor Rho
69_002_scaffold_466_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7667..9130)
DNA (1464bp) protein (488aa)
Aldehyde dehydrogenase (NAD) family protein {ECO:0000313|EMBL:EES37383.1}; EC=1.2.1.- {ECO:0000313|EMBL:EES37383.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
Aldehyde dehydrogenase (NAD) family protein n=11 Tax=Staphylococcus epidermidis RepID=C5QTR2_STAEP
Displaying 10 items

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