ggKbase home page

69_002_scaffold_125

Search features with annotation key words

Displaying items 1-30 of 33 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_002_scaffold_125_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..530
DNA (528bp) protein (176aa)
Cystine-binding periplasmic protein n=1 Tax=Escherichia coli HVH 216 (4-3042952) RepID=T8C517_ECOLX
fliY; cystine transporter subunit; K02424 cystine transport system substrate-binding protein
Cystine-binding periplasmic protein {ECO:0000313|EMBL:ESD91403.1}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
69_002_scaffold_125_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

635..1621
DNA (987bp) protein (329aa)
D-cysteine desulfhydrase (EC:4.4.1.15)
Cysteine desulfhydrase {ECO:0000313|EMBL:AJO83905.1}; EC=4.4.1.15 {ECO:0000313|EMBL:AJO83905.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
D-cysteine desulfhydrase n=30 Tax=Escherichia coli RepID=G0D257_ECOLX
69_002_scaffold_125_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1636..2304
DNA (669bp) protein (223aa)
Inner membrane amino-acid ABC transporter permease protein YecS n=1080 Tax=Enterobacteriaceae RepID=YECS_ECOL6
yecS; ABC transporter permease; K10009 cystine transport system permease protein
Inner membrane amino-acid ABC transporter permease protein yecS {ECO:0000313|EMBL:EZK21957.1}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C2.;"
69_002_scaffold_125_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2301..3053
DNA (753bp) protein (251aa)
yecC; putative transporter subunit: ATP-binding component of ABC superfamily; K10010 cystine transport system ATP-binding protein [EC:3.6.3.-]
Uncharacterized amino-acid ABC transporter ATP-binding n=299 Tax=Escherichia coli RepID=E2QNB3_ECOLX
Amino-acid ABC transporter ATP-binding protein YecC {ECO:0000313|EMBL:EOV07767.1}; TaxID=1169355 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE38.;"
69_002_scaffold_125_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3283..4005
DNA (723bp) protein (241aa)
Regulatory protein sdiA n=389 Tax=Escherichia RepID=E2QNB2_ECOLX
sdiA; Regulatory protein sdiA
Regulatory protein SdiA {ECO:0000313|EMBL:EOW97617.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
69_002_scaffold_125_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4073..4297)
DNA (225bp) protein (75aa)
Uncharacterized protein YecF n=1180 Tax=Enterobacteriaceae RepID=YECF_ECOL6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV98108.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
69_002_scaffold_125_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4756..5412
DNA (657bp) protein (219aa)
Response regulator UvrY n=794 Tax=Enterobacteriaceae RepID=UVRY_ECO57
uvrY; response regulator; K07689 two-component system, NarL family, invasion response regulator UvrY
Response regulator receiver domain protein {ECO:0000313|EMBL:EFK22431.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
69_002_scaffold_125_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5409..7241
DNA (1833bp) protein (611aa)
UvrABC system protein C n=1043 Tax=Enterobacteriaceae RepID=UVRC_ECO24
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=749544 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 175-1.;"
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C
69_002_scaffold_125_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7298..7846
DNA (549bp) protein (183aa)
pgsA; phosphatidylglycerophosphate synthetase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000256|HAMAP-Rule:MF_01437}; EC=2.7.8.5 {ECO:0000256|HAMAP-Rule:MF_01437};; Phosphatidylglycerophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01437}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1265 Tax=Enterobacteriaceae RepID=PGSA_ECO57
69_002_scaffold_125_trna_1
unknown

Not on your lists

7998..8070
DNA (73bp)
transferRNA Gly
69_002_scaffold_125_trna_2
unknown

Not on your lists

8127..8197
DNA (71bp)
transferRNA Cys
69_002_scaffold_125_trna_3
unknown

Not on your lists

8213..8296
DNA (84bp)
transferRNA Leu
69_002_scaffold_125_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8541..9143)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Escherichia coli MP021561.2 RepID=M9G7D1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EMX30648.1}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
hypothetical protein
69_002_scaffold_125_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9362..10564
DNA (1203bp) protein (401aa)
Phage integrase family protein n=1 Tax=Escherichia coli 2788150 RepID=M9AQF4_ECOLX
Integrase {ECO:0000313|EMBL:KHH06518.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
int1157; integrase
69_002_scaffold_125_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10596..10847
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3889-1 RepID=T9U4S9_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KHH06517.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_002_scaffold_125_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10999..11313
DNA (315bp) protein (105aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=V6PC76_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ENB19652.1}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
hypothetical protein
69_002_scaffold_125_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11339..11872
DNA (534bp) protein (178aa)
Uncharacterized protein n=33 Tax=Escherichia coli RepID=E3PAN3_ECOH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMV50303.1}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
69_002_scaffold_125_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11945..12379
DNA (435bp) protein (145aa)
Uncharacterized protein n=6 Tax=Escherichia coli RepID=G2CZQ4_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQY61034.1}; TaxID=1281227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3240-1.;"
hypothetical protein
69_002_scaffold_125_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12681..12908
DNA (228bp) protein (76aa)
Uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=T7JSX8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:AJE56359.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_002_scaffold_125_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12990..13808)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Escherichia coli KOEGE 3 (4a) RepID=U0AJ60_ECOLX
Strain O157 SvETEC scaffold4.1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ47806.1}; Uncharacterized protein {ECO:0000313|EMBL:AJE56358.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_002_scaffold_125_18
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13922..14770)
DNA (849bp) protein (283aa)
COG2378: Predicted transcriptional regulator n=2 Tax=Cronobacter sakazakii RepID=K8CR62_CROSK
putative transcriptional regulator, HTH
COG2378: Predicted transcriptional regulator {ECO:0000313|EMBL:CCK00860.1}; TaxID=1208663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii 701.;"
69_002_scaffold_125_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15150..15476
DNA (327bp) protein (109aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=M8SG25_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EMV50307.1}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
hypothetical protein
69_002_scaffold_125_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15525..18125)
DNA (2601bp) protein (867aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=T9V6D6_ECOLX
DNA polymerase {ECO:0000313|EMBL:KHI26503.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
putative DNA-directed DNA polymerase
69_002_scaffold_125_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18172..18810)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3240-1 RepID=T9GB80_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQY61027.1}; TaxID=1281227 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3240-1.;"
hypothetical protein
69_002_scaffold_125_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18800..19000)
DNA (201bp) protein (67aa)
Excisionase family DNA binding domain-containing protein n=6 Tax=Escherichia coli RepID=L5DHF4_ECOLX
Strain O157 SvETEC scaffold4.1, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ47802.1}; Uncharacterized protein {ECO:0000313|EMBL:KHH06508.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
69_002_scaffold_125_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19151..19960)
DNA (810bp) protein (270aa)
Phage integrase family protein n=2 Tax=Escherichia coli RepID=N3NVM1_ECOLX
Integrase {ECO:0000313|EMBL:KHH06507.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
phage integrase
69_002_scaffold_125_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19994..20281)
DNA (288bp) protein (96aa)
Phage integrase family protein n=11 Tax=Escherichia coli RepID=M8LLN8_ECOLX
phage integrase
Integrase {ECO:0000313|EMBL:KHI26500.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_002_scaffold_125_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20424..21554)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=12 Tax=Escherichia coli RepID=M8L8K1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:KHH06506.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
69_002_scaffold_125_26
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22061..23227)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Cronobacter sakazakii 696 RepID=K8CQ93_CROSK
Uncharacterized protein {ECO:0000313|EMBL:CCK07506.1}; TaxID=1208664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii 696.;"
hypothetical protein
69_002_scaffold_125_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23600..25123
DNA (1524bp) protein (508aa)
Type I restriction enzyme M protein {ECO:0000313|EMBL:KGM83149.1}; EC=2.1.1.72 {ECO:0000313|EMBL:KGM83149.1};; Type I restriction-modification system, M subunit {ECO:0000313|EMBL:KGM81349.1}; EC=2.1.1.72 {ECO:0000313|EMBL:KGM81349.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
putative type I methylase; K03427 type I restriction enzyme M protein [EC:2.1.1.72]
Type I restriction-modification system, M subunit n=1 Tax=Escherichia coli HVH 164 (4-5953081) RepID=T7KE27_ECOLX
Displaying items 1-30 of 33 in total

View Taxonomy