ggKbase home page

69_002_scaffold_23

Search features with annotation key words

Displaying items 1-30 of 70 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_002_scaffold_23_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(111..656)
DNA (546bp) protein (182aa)
hemG; protoporphyrinogen oxidase; K00230 menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
Protoporphyrinogen IX dehydrogenase [menaquinone] n=736 Tax=Enterobacteriaceae RepID=HEMG_ECO57
Protoporphyrinogen IX dehydrogenase [menaquinone] {ECO:0000313|EMBL:EOW01632.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
69_002_scaffold_23_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(668..2119)
DNA (1452bp) protein (484aa)
Trk system potassium uptake protein n=387 Tax=Escherichia RepID=E2QI42_ECOLX
trkH; potassium transporter; K03498 trk system potassium uptake protein TrkH
Trk system potassium uptake protein {ECO:0000256|PIRNR:PIRNR006247}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
69_002_scaffold_23_3
Escherichia albertii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2158..2772)
DNA (615bp) protein (205aa)
Potassium uptake protein n=658 Tax=Enterobacteriaceae RepID=C3SJX2_ECOLX
yigZ; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDS90262.1}; TaxID=502347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia albertii (strain TW07627).;"
69_002_scaffold_23_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2772..4103)
DNA (1332bp) protein (444aa)
pepQ; proline dipeptidase PepQ; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9]
Xaa-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582}; Short=X-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279};; EC=3.4.13.9 {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582};; Imidodipeptidase {ECO:0000256|HAMAP-Rule:MF_01279}; Proline dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_DG131-3.;"
Xaa-Pro dipeptidase n=682 Tax=cellular organisms RepID=PEPQ_ECO24
69_002_scaffold_23_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4293..6482
DNA (2190bp) protein (730aa)
fadB; Multifunctional enzyme complex enoyl-CoA hydratase/Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase / 3-hydroxybutyryl-CoA epimerase (EC:5.3.3.8 1.1.1.35 5.1.2.3 4.2.1.17); K01825 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
Fatty acid oxidation complex subunit alpha n=35 Tax=Escherichia coli RepID=D2NDT4_ECOS5
Fatty acid oxidation complex subunit alpha {ECO:0000256|HAMAP-Rule:MF_01621, ECO:0000256|SAAS:SAAS00051741}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_002_scaffold_23_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6492..7655
DNA (1164bp) protein (388aa)
3-ketoacyl-CoA thiolase {ECO:0000256|HAMAP-Rule:MF_01620, ECO:0000256|SAAS:SAAS00022002}; EC=2.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01620, ECO:0000256|SAAS:SAAS00021940};; Acetyl-CoA acyltransferase {ECO:0000256|HAMAP-Rule:MF_01620}; Beta-ketothiolase {ECO:0000256|HAMAP-Rule:MF_01620}; Fatty acid oxidation complex subunit beta {ECO:0000256|HAMAP-Rule:MF_01620}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45
3-ketoacyl-CoA thiolase n=133 Tax=Enterobacteriaceae RepID=FADA_ECOK1
3-ketoacyl-CoA thiolase
69_002_scaffold_23_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7836..8537)
DNA (702bp) protein (234aa)
fre; flavin reductase Fre; K05368 aquacobalamin reductase / NAD(P)H-flavin reductase [EC:1.16.1.3 1.5.1.41]
NAD(P)H-flavin reductase n=1191 Tax=Enterobacteriaceae RepID=FRE_ECO57
FMN reductase {ECO:0000313|EMBL:ESD18887.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
69_002_scaffold_23_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8583..10076)
DNA (1494bp) protein (498aa)
3-octaprenyl-4-hydroxybenzoate decarboxylase; K03182 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [EC:4.1.1.-]
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011098}; EC=4.1.1.- {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011102};; Polyprenyl p-hydroxybenzoate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01636}; TaxID=1116133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.8.;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=813 Tax=Enterobacteriaceae RepID=UBID_ECOL6
69_002_scaffold_23_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10243..10731
DNA (489bp) protein (163aa)
Transcription antitermination protein RfaH n=397 Tax=Escherichia RepID=RFAH_ECOL5
rfaH; transcriptional activator RfaH; K05785 transcriptional antiterminator RfaH
Transcription antitermination protein RfaH {ECO:0000256|HAMAP-Rule:MF_00951}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
69_002_scaffold_23_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10728..11510)
DNA (783bp) protein (261aa)
Tat-linked quality control protein TatD n=36 Tax=Escherichia coli RepID=D2NDS9_ECOS5
hypothetical protein
Tat-linked quality control protein TatD {ECO:0000256|HAMAP-Rule:MF_00901}; Deoxyribonuclease TatD {ECO:0000256|HAMAP-Rule:MF_00901}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_002_scaffold_23_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11552..12328)
DNA (777bp) protein (259aa)
Sec-independent protein translocase protein TatC n=378 Tax=Escherichia RepID=TATC_ECOL6
Sec-independent protein translocase protein
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
69_002_scaffold_23_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12331..12846)
DNA (516bp) protein (172aa)
Sec-independent protein translocase protein TatB n=59 Tax=Escherichia coli RepID=D2NDS7_ECOS5
translocase
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_002_scaffold_23_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12850..13119)
DNA (270bp) protein (90aa)
Sec-independent protein translocase protein TatA n=1283 Tax=Enterobacteriaceae RepID=TATA_ECO57
tatA; TatABCE protein translocation system subunit; K03116 sec-independent protein translocase protein TatA
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
69_002_scaffold_23_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13198..14838)
DNA (1641bp) protein (547aa)
Probable protein kinase UbiB {ECO:0000255|HAMAP-Rule:MF_00414}; EC=2.7.-.- {ECO:0000255|HAMAP-Rule:MF_00414};; Ubiquinone biosynthesis protein UbiB {ECO:0000255|HAMAP-Rule:MF_00414}; TaxID=362663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:K15:H31 (strain 536 / UPEC).;"
Probable protein kinase UbiB n=374 Tax=Enterobacteriaceae RepID=UBIB_ECO45
ubiB; putative ubiquinone biosynthesis protein UbiB; K03688 ubiquinone biosynthesis protein
69_002_scaffold_23_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14835..15440)
DNA (606bp) protein (202aa)
Uncharacterized protein n=137 Tax=Escherichia RepID=B1LM22_ECOSM
yigP; hypothetical protein; K03690 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELE51721.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
69_002_scaffold_23_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15454..16209)
DNA (756bp) protein (252aa)
ubiE; ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201]
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000256|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=381 Tax=Escherichia RepID=UBIE_ECO45
69_002_scaffold_23_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16304..17731)
DNA (1428bp) protein (476aa)
Uncharacterized protein n=33 Tax=Escherichia coli RepID=D2NDS2_ECOS5
hypothetical protein
DNA recombination protein RmuC {ECO:0000313|EMBL:EGI13697.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
69_002_scaffold_23_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17948..18715
DNA (768bp) protein (256aa)
Transcriptional regulator n=1 Tax=Escherichia coli HVH 177 (4-2876612) RepID=V8RTI0_ECOLX
IclR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EYZ96933.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
69_002_scaffold_23_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18739..19743
DNA (1005bp) protein (335aa)
2-keto-3-deoxy-galactonokinase n=35 Tax=Escherichia coli RepID=D2NDR9_ECOS5
2-keto-3-deoxy-galactonokinase
Carbohydrate kinase {ECO:0000313|EMBL:AJO85898.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_002_scaffold_23_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19733..20362
DNA (630bp) protein (210aa)
2-keto-3-deoxy-6-phosphogluconate aldolase n=36 Tax=Escherichia coli RepID=D2NDR8_ECOS5
2-keto-3-deoxy-6-phosphogluconate aldolase
2-keto-3-deoxy-6-phosphogluconate aldolase {ECO:0000313|EMBL:BAI57227.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_23_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20387..21361
DNA (975bp) protein (325aa)
Periplasmic binding protein n=27 Tax=Escherichia coli RepID=L2ZDH1_ECOLX
hypothetical protein
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Uncharacterized protein {ECO:0000313|EMBL:CDN84670.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_002_scaffold_23_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21378..21884
DNA (507bp) protein (169aa)
Uncharacterized protein n=363 Tax=Escherichia RepID=C6EF69_ECOBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW02900.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
69_002_scaffold_23_23
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21897..23387
DNA (1491bp) protein (497aa)
Integral membrane protein n=97 Tax=Escherichia RepID=B1LM14_ECOSM
hypothetical protein; K07793 putative tricarboxylic transport membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CDC77558.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
69_002_scaffold_23_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23422..24186)
DNA (765bp) protein (255aa)
udp; uridine phosphorylase (EC:2.4.2.3); K00757 uridine phosphorylase [EC:2.4.2.3]
Uridine phosphorylase {ECO:0000256|RuleBase:RU361131}; EC=2.4.2.3 {ECO:0000256|RuleBase:RU361131};; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli SEPT362.;"
Uridine phosphorylase n=2 Tax=Escherichia coli RepID=B7N2D3_ECO81
69_002_scaffold_23_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24448..25257
DNA (810bp) protein (270aa)
Carboxymethylenebutenolidase n=52 Tax=Escherichia RepID=V0AK18_ECOLX
putative hydrolase
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Putative carboxymethylenebutenolidase {ECO:0000313|EMBL:CDN84666.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_002_scaffold_23_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25288..25383)
DNA (96bp) protein (32aa)
Uncharacterized protein n=384 Tax=Escherichia RepID=B1LM10_ECOSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU22926.1}; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2A.;"
69_002_scaffold_23_27
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25514..26182
DNA (669bp) protein (223aa)
Uncharacterized protein n=60 Tax=Escherichia RepID=D2NDR2_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC77541.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
69_002_scaffold_23_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26188..27048
DNA (861bp) protein (287aa)
Uncharacterized protein n=35 Tax=Escherichia coli RepID=D2NDR1_ECOS5
hypothetical protein
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Uncharacterized protein {ECO:0000313|EMBL:CDN84663.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_002_scaffold_23_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27143..28702
DNA (1560bp) protein (520aa)
Uncharacterized protein n=35 Tax=Escherichia coli RepID=D2NDR0_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI57219.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_23_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28648..30123
DNA (1476bp) protein (492aa)
Uncharacterized protein n=35 Tax=Escherichia coli RepID=D2NDQ9_ECOS5
hypothetical protein
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Uncharacterized protein {ECO:0000313|EMBL:CDN84661.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Displaying items 1-30 of 70 in total

View Taxonomy