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69_002_scaffold_30

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Displaying items 1-30 of 62 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_002_scaffold_30_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..480
DNA (480bp) protein (160aa)
Macrodomain Ter protein n=347 Tax=Enterobacteriaceae RepID=MATP_ECO27
hypothetical protein; K09911 hypothetical protein
Macrodomain Ter protein {ECO:0000256|HAMAP-Rule:MF_01073, ECO:0000256|SAAS:SAAS00064857}; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
69_002_scaffold_30_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(556..1608)
DNA (1053bp) protein (351aa)
Membrane protein n=1 Tax=Escherichia coli JJ1886 RepID=U5SIG4_ECOLX
ompA; outer membrane protein A (3a,II*,G,d); K03286 OmpA-OmpF porin, OOP family
Outer membrane protein A {ECO:0000313|EMBL:EGI17096.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
69_002_scaffold_30_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1964..2473)
DNA (510bp) protein (170aa)
Cell division inhibitor SulA n=210 Tax=Escherichia coli RepID=SULA_ECO81
sulA; cell division inhibitor
Cell division inhibitor SulA {ECO:0000256|HAMAP-Rule:MF_01179, ECO:0000256|SAAS:SAAS00088372}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
69_002_scaffold_30_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2692..3321
DNA (630bp) protein (210aa)
Uncharacterized protein n=54 Tax=Escherichia coli RepID=B7UN38_ECO27
hypothetical protein
Transcriptional coactivator for CRP {ECO:0000313|EMBL:EHU48659.1}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2C.;"
69_002_scaffold_30_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3284..5446)
DNA (2163bp) protein (721aa)
Inner membrane protein yccS n=10 Tax=Escherichia coli RepID=H1BW47_ECOLX
Membrane protein family {ECO:0000313|EMBL:ESA71306.1}; TaxID=1268975 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 110957.;"
yccS; hypothetical protein
69_002_scaffold_30_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5456..5902)
DNA (447bp) protein (149aa)
Inner membrane protein YccF n=741 Tax=Enterobacteriaceae RepID=YCCF_ECOLI
yccF; inner membrane protein
Inner membrane protein yccF {ECO:0000313|EMBL:KDG97742.1}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UCI 65.;"
69_002_scaffold_30_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6025..8079
DNA (2055bp) protein (685aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
DNA helicase IV n=45 Tax=Escherichia RepID=D2NGE7_ECOS5
DNA helicase IV
69_002_scaffold_30_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8111..8569)
DNA (459bp) protein (153aa)
mqsA; Methylglyoxal synthase (EC:4.2.3.3); K01734 methylglyoxal synthase [EC:4.2.3.3]
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
Methylglyoxal synthase n=373 Tax=Escherichia RepID=MGSA_ECO27
69_002_scaffold_30_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8665..9327)
DNA (663bp) protein (221aa)
UPF0319 protein YccT n=1290 Tax=Enterobacteriaceae RepID=YCCT_ECO24
yccT; hypothetical protein; K09909 hypothetical protein
UPF0319 protein YccT {ECO:0000256|HAMAP-Rule:MF_00789}; Flags: Precursor;; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
69_002_scaffold_30_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9500..9913
DNA (414bp) protein (138aa)
CoA binding domain protein n=1 Tax=Escherichia coli 908555 RepID=V0YGD5_ECOLX
yccU; putative CoA-binding protein; K06929
CoA-binding protein with NAD(P)-binding Rossmann-fold domain {ECO:0000313|EMBL:ELC90579.1}; TaxID=1181739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE193.;"
69_002_scaffold_30_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9958..10275)
DNA (318bp) protein (106aa)
Heat shock protein HspQ n=1422 Tax=Enterobacteriaceae RepID=HSPQ_ECO27
yccV; heat shock protein HspQ; K11940 heat shock protein HspQ
Heat shock protein HspQ {ECO:0000256|HAMAP-Rule:MF_01194, ECO:0000256|SAAS:SAAS00016449}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
69_002_scaffold_30_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10333..11508)
DNA (1176bp) protein (392aa)
Ribosomal RNA large subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01857, ECO:0000256|SAAS:SAAS00011825}; EC=2.1.1.191 {ECO:0000256|HAMAP-Rule:MF_01857, ECO:0000256|SAAS:SAAS00011815};; 23S rRNA m5C1962 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01857}; rRNA (cytosine-C(5)-)-methyltransferase RlmI {ECO:0000256|HAMAP-Rule:MF_01857}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
hypothetical protein; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
Ribosomal RNA large subunit methyltransferase I n=20 Tax=Escherichia coli RepID=L2YLV0_ECOLX
69_002_scaffold_30_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11618..11896
DNA (279bp) protein (93aa)
yccX; acylphosphatase (EC:3.6.1.7); K01512 acylphosphatase [EC:3.6.1.7]
Acylphosphatase {ECO:0000256|HAMAP-Rule:MF_01450, ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|HAMAP-Rule:MF_01450, ECO:0000256|RuleBase:RU000553};; Acylphosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_01450}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
Acylphosphatase n=76 Tax=Escherichia RepID=B7NLE8_ECO7I
69_002_scaffold_30_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11893..12222)
DNA (330bp) protein (110aa)
yccK; sulfur transfer protein TusE; K11179 tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
Sulfurtransferase {ECO:0000256|PIRNR:PIRNR006223}; EC=2.8.1.- {ECO:0000256|PIRNR:PIRNR006223};; TaxID=656449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TW10509.;"
Sulfurtransferase n=95 Tax=Escherichia RepID=F0JLD0_ESCFE
69_002_scaffold_30_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12314..12973)
DNA (660bp) protein (220aa)
Inner membrane protein YccA n=886 Tax=Enterobacteriaceae RepID=YCCA_ECOL6
yccA; inner membrane protein; K06890
Uncharacterized protein {ECO:0000313|EMBL:EFK49295.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
69_002_scaffold_30_trna_1
unknown

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comp(13185..13269)
DNA (85bp)
transferRNA Ser
69_002_scaffold_30_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13697..14815
DNA (1119bp) protein (373aa)
hyaA; hydrogenase 1, small subunit; K06282 hydrogenase small subunit [EC:1.12.99.6]
Uptake hydrogenase small subunit {ECO:0000313|EMBL:CDL43086.1}; EC=1.12.99.6 {ECO:0000313|EMBL:CDL43086.1};; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
Hydrogenase-1 small subunit n=126 Tax=Enterobacteriaceae RepID=B6I947_ECOSE
69_002_scaffold_30_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14812..16605
DNA (1794bp) protein (598aa)
hyaB; Hydrogenase 1 large subunit (EC:1.12.99.6); K06281 hydrogenase large subunit [EC:1.12.99.6]
Hydrogenase 1 large subunit n=30 Tax=Escherichia RepID=G0D5I1_ECOLX
HyaB protein; Hydrogenase-1 large subunit {ECO:0000313|EMBL:CDN81439.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_002_scaffold_30_18
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16624..17331
DNA (708bp) protein (236aa)
Ni/Fe-hydrogenase 1 B-type cytochrome subunit n=263 Tax=Enterobacteriaceae RepID=E2QJH7_ECOLX
hyaC; hydrogenase 1 b-type cytochrome subunit; K03620 Ni/Fe-hydrogenase 1 B-type cytochrome subunit
Hydrogenase 1 b-type cytochrome subunit,Probable Ni/Fe-hydrogenase 1 B-type cytochrome subunit,hydrogenase 1 b-type cytochrome subunit,Cytochrome b,Ni/Fe-hydrogenase, b-type cytochrome subunit,Cytochr... {ECO:0000313|EMBL:CDX06260.1}; TaxID=623 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri.;"
69_002_scaffold_30_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17328..17915
DNA (588bp) protein (196aa)
hyaD; hydrogenase maturation protease; K03605 hydrogenase 1 maturation protease [EC:3.4.24.-]
Hydrogenase maturation protease n=39 Tax=Escherichia coli RepID=G0D5I3_ECOLX
HyaD protein; Hydrogenase 1 maturation protease {ECO:0000313|EMBL:CDN81441.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_002_scaffold_30_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17912..18310
DNA (399bp) protein (133aa)
Hydrogenase 1 maturation protease HyaE n=53 Tax=Escherichia RepID=D2NGG1_ECOS5
hydrogenase-1 operon protein HyaE
Hydrogenase 1 maturation protease HyaE {ECO:0000313|EMBL:BAI54430.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_30_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18307..19164
DNA (858bp) protein (286aa)
Hydrogenase-1 operon protein n=28 Tax=Escherichia coli RepID=G0D5I5_ECOLX
hyaF; Hydrogenase-1 operon protein; K03618 hydrogenase-1 operon protein HyaF
Hydrogenase maturation factor HoxQ {ECO:0000313|EMBL:CDL43092.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
69_002_scaffold_30_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19298..20842
DNA (1545bp) protein (515aa)
Cytochrome BD-II oxidase subunit I n=3 Tax=Escherichia coli RepID=F4SX59_ECOLX
Cytochrome D ubiquinol oxidase subunit I {ECO:0000313|EMBL:ESA71324.1}; TaxID=1268975 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 110957.;"
cytochrome bd-II oxidase subunit 1
69_002_scaffold_30_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20854..21990
DNA (1137bp) protein (379aa)
cytochrome bd-II oxidase subunit 2; K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-]
Cytochrome bd-II ubiquinol oxidase subunit 2 n=700 Tax=Enterobacteriaceae RepID=APPB_ECOLI
Cytochrome bd-II oxidase subunit 2 {ECO:0000313|EMBL:EOV64265.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
69_002_scaffold_30_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22003..22095
DNA (93bp) protein (31aa)
Putative cytochrome bd-II ubiquinol oxidase subunit AppX n=621 Tax=Enterobacteriaceae RepID=APPX_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQY27193.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
69_002_scaffold_30_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22175..23485
DNA (1311bp) protein (437aa)
appA; Phosphoanhydride phosphohydrolase (pH 2.5 acid phosphatase) (AP) / 4-phytase (EC:3.1.3.26 3.1.3.2); K01093 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
Periplasmic AppA protein {ECO:0000313|EMBL:KEJ61559.1}; EC=3.1.3.26 {ECO:0000313|EMBL:KEJ61559.1};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Phosphoanhydride phosphohydrolase (PH 2.5 acid phosphatase) (AP) / 4-phytase n=27 Tax=Escherichia coli RepID=G0D5I8_ECOLX
69_002_scaffold_30_26
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23971..24183
DNA (213bp) protein (71aa)
Cold shock-like protein CspG n=1342 Tax=Enterobacteriaceae RepID=CSPG_ECO57
cspG; Cold shock-like protein cspG
Cold shock-like protein CspG {ECO:0000313|EMBL:AIL39913.1}; TaxID=1282358 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri Shi06HN006.;"
69_002_scaffold_30_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24577..24750
DNA (174bp) protein (58aa)
Protein GnsA n=1177 Tax=Enterobacteriaceae RepID=GNSA_ECOL6
GnsB protein
GnsA/GnsB family protein {ECO:0000313|EMBL:KEO36205.1}; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C2.;"
69_002_scaffold_30_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24799..25872)
DNA (1074bp) protein (358aa)
4Fe-4S membrane protein n=26 Tax=Escherichia coli RepID=L2ZQU0_ECOLX
electron transporter YccM
Putative electron transport protein yccM {ECO:0000313|EMBL:KEJ61563.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_002_scaffold_30_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25955..28642)
DNA (2688bp) protein (896aa)
torS; Hybrid sensory histidine kinase; K07647 two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Hybrid sensory histidine kinase n=25 Tax=Escherichia coli RepID=G0D612_ECOLX
Displaying items 1-30 of 62 in total

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