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69_002_scaffold_63

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Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_002_scaffold_63_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..802
DNA (801bp) protein (267aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Two-component sensor kinase n=52 Tax=Escherichia RepID=D2NEZ3_ECOS5
dpiB; sensor histidine kinase DpiB
69_002_scaffold_63_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

771..1451
DNA (681bp) protein (227aa)
Transcriptional regulatory protein DpiA n=1210 Tax=Enterobacteriaceae RepID=DPIA_ECO57
dpiA; transcriptional regulatory protein DpiA; K07702 two-component system, CitB family, response regulator CitB
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
69_002_scaffold_63_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1492..2877)
DNA (1386bp) protein (462aa)
Anaerobic C4-dicarboxylate transporter DcuC n=510 Tax=Escherichia RepID=DCUC_ECOL6
dcuC; Anaerobic C4-dicarboxylate transporter dcuC
Anaerobic C4-dicarboxylate transporter DcuC {ECO:0000313|EMBL:EGI41991.1}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;"
69_002_scaffold_63_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3464..4024
DNA (561bp) protein (187aa)
pagP; palmitoyl transferase; K12973 palmitoyl transferase [EC:2.3.1.-]
Lipid A palmitoyltransferase PagP {ECO:0000256|HAMAP-Rule:MF_00837, ECO:0000256|SAAS:SAAS00061485}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00837, ECO:0000256|SAAS:SAAS00061443};; Lipid A acylation protein {ECO:0000256|HAMAP-Rule:MF_00837}; Flags: Precursor;; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
Lipid A palmitoyltransferase PagP n=244 Tax=Escherichia RepID=PAGP_ECOL6
69_002_scaffold_63_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4199..4408
DNA (210bp) protein (70aa)
Cold-shock DNA-binding domain protein n=1 Tax=Enterobacter asburiae (strain LF7a) RepID=G2S1P6_ENTAL
cspE; cold shock protein CspE; K03704 cold shock protein (beta-ribbon, CspA family)
RNA chaperone, negative regulator of cspA transcription {ECO:0000313|EMBL:END95579.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
69_002_scaffold_63_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4462..4845)
DNA (384bp) protein (128aa)
Putative fluoride ion transporter CrcB n=1139 Tax=Enterobacteriaceae RepID=CRCB_ECO24
crcB; camphor resistance protein CrcB; K06199 CrcB protein
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
69_002_scaffold_63_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4938..5726
DNA (789bp) protein (263aa)
Uncharacterized protein n=37 Tax=Escherichia coli RepID=D2NEZ9_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI54105.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_63_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5855..6058
DNA (204bp) protein (68aa)
Sec-independent protein translocase protein TatE n=1426 Tax=Enterobacteriaceae RepID=TATE_ECOLI
tatE; preprotein translocase subunit TatE
Probable Sec-independent protein translocase protein TatE {ECO:0000256|HAMAP-Rule:MF_00903}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C2.;"
69_002_scaffold_63_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6158..7123)
DNA (966bp) protein (322aa)
lipA; lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8]
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=1281210 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3190-1.;"
Lipoyl synthase n=1323 Tax=Enterobacteriaceae RepID=LIPA_ECO24
69_002_scaffold_63_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7355..7888)
DNA (534bp) protein (178aa)
Uncharacterized protein n=34 Tax=Escherichia coli RepID=L2ZRR7_ECOLX
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAI54108.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_63_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8148..8789)
DNA (642bp) protein (214aa)
lipB; lipoate-protein ligase B; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181]
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" so
Octanoyltransferase n=185 Tax=Escherichia RepID=LIPB_ECO7I
69_002_scaffold_63_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8890..9153)
DNA (264bp) protein (88aa)
UPF0250 protein YbeD n=1445 Tax=Enterobacteriaceae RepID=YBED_ECO24
ybeD; hypothetical protein; K09158 hypothetical protein
UPF0250 protein YbeD {ECO:0000256|HAMAP-Rule:MF_00659}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
69_002_scaffold_63_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9263..10474)
DNA (1212bp) protein (404aa)
dacA; D-alanyl-D-alanine carboxypeptidase dacA precursor; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D-alanyl-D-alanine carboxypeptidase dacA {ECO:0000313|EMBL:KEO01280.1}; EC=3.5.2.6 {ECO:0000313|EMBL:KEO01280.1};; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
D-alanyl-D-alanine carboxypeptidase DacA n=1315 Tax=Bacteria RepID=DACA_ECO57
69_002_scaffold_63_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10614..11702)
DNA (1089bp) protein (363aa)
Rare lipoprotein A n=265 Tax=Escherichia RepID=E2QHJ3_ECOLX
rare lipoprotein A; K03642 rare lipoprotein A
Sporulation and cell division repeat protein {ECO:0000313|EMBL:ESD32499.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
69_002_scaffold_63_15
Escherichia sp. KTE31, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11713..12825)
DNA (1113bp) protein (371aa)
Rod shape-determining protein rodA n=299 Tax=Escherichia RepID=E2QHJ4_ECOLX
cell wall shape-determining protein; K05837 rod shape determining protein RodA
Rod shape-determining protein rodA {ECO:0000313|EMBL:EOU83261.1}; TaxID=1169349 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE31.;"
69_002_scaffold_63_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12828..14729)
DNA (1902bp) protein (634aa)
Penicillin-binding protein 2 n=1358 Tax=Enterobacteriaceae RepID=PBP2_ECO57
mrdA; penicillin-binding protein 2; K05515 penicillin-binding protein 2
Penicillin-binding protein 2 {ECO:0000313|EMBL:KDY97031.1}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
69_002_scaffold_63_17

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comp(14760..15227)
DNA (468bp) protein (156aa)
ybeA; rRNA large subunit methyltransferase; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1393645 species="Bacteria; environmental samples.;" source="uncultured b
Ribosomal RNA large subunit methyltransferase H n=1292 Tax=Enterobacteriaceae RepID=RLMH_ECO24
69_002_scaffold_63_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15231..15548)
DNA (318bp) protein (106aa)
Ribosomal silencing factor RsfS n=1415 Tax=Enterobacteriaceae RepID=IOJAP_ECOL6
ybeB; hypothetical protein; K09710 ribosome-associated protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
69_002_scaffold_63_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15808..16419)
DNA (612bp) protein (204aa)
Alpha-ribazole phosphatase {ECO:0000313|EMBL:KEJ61904.1}; EC=3.1.3.73 {ECO:0000313|EMBL:KEJ61904.1};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Alpha-ribazole-5'-phosphate phosphatase n=45 Tax=Escherichia coli RepID=D2NF12_ECOS5
alpha-ribazole-5'-phosphate phosphatase
69_002_scaffold_63_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16443..17084)
DNA (642bp) protein (214aa)
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
Nicotinate-nucleotide adenylyltransferase; EC=2.7.7.18;; Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; Short=NaMN adenylyltransferase;; TaxID=199310 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC).;"
Nicotinate-nucleotide adenylyltransferase n=279 Tax=Escherichia RepID=NADD_ECOL6
69_002_scaffold_63_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17086..18117)
DNA (1032bp) protein (344aa)
holA; DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta [EC:2.7.7.7]
DNA polymerase III delta subunit {ECO:0000313|EMBL:CDL49072.1}; EC=2.7.7.7 {ECO:0000313|EMBL:CDL49072.1};; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
DNA polymerase III subunit delta n=87 Tax=Escherichia coli RepID=E2QHK0_ECOLX
69_002_scaffold_63_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18117..18698)
DNA (582bp) protein (194aa)
LPS-assembly lipoprotein LptE n=1004 Tax=Enterobacteriaceae RepID=LPTE_ECO24
rlpB; LPS-assembly lipoprotein RlpB; K03643 LPS-assembly lipoprotein
LPS-assembly lipoprotein LptE {ECO:0000256|HAMAP-Rule:MF_01186, ECO:0000256|SAAS:SAAS00074334}; Flags: Precursor;; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
69_002_scaffold_63_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18713..21295)
DNA (2583bp) protein (861aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
Leucine--tRNA ligase n=4 Tax=Escherichia coli RepID=D7ZJ53_ECOLX
69_002_scaffold_63_24
Escherichia sp. KTE11, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21530..22012
DNA (483bp) protein (161aa)
Uncharacterized protein YbeL n=1361 Tax=Enterobacteriaceae RepID=YBEL_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELC22065.1}; TaxID=1169331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE11.;"
69_002_scaffold_63_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22262..22480)
DNA (219bp) protein (73aa)
Uncharacterized protein n=40 Tax=Escherichia coli RepID=D2NF18_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO82527.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_002_scaffold_63_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22557..23111)
DNA (555bp) protein (185aa)
Uncharacterized protein n=40 Tax=Escherichia RepID=D2NF19_ECOS5
hypothetical protein
Sel1 repeat superfamily {ECO:0000313|EMBL:EGI16683.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
69_002_scaffold_63_27
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23213..23920
DNA (708bp) protein (236aa)
Uncharacterized protein n=56 Tax=Escherichia RepID=B1LL98_ECOSM
ybeU; hypothetical protein
Putative tRNA ligase {ECO:0000313|EMBL:CDC78050.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
69_002_scaffold_63_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23917..25368
DNA (1452bp) protein (484aa)
Uncharacterized protein n=34 Tax=Escherichia coli RepID=D2NF21_ECOS5
hypothetical protein
Molecular chaperone DnaJ {ECO:0000313|EMBL:AJO82530.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_002_scaffold_63_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25428..27098)
DNA (1671bp) protein (557aa)
Chaperone protein hscC n=39 Tax=Escherichia coli RepID=G0D0Z9_ECOLX
ybeW; Chaperone protein hscC; K04045 molecular chaperone HscC
Hsp70 family protein {ECO:0000313|EMBL:KEJ61915.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_002_scaffold_63_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27182..28117)
DNA (936bp) protein (312aa)
Pyrimidine-specific ribonucleoside hydrolase RihA {ECO:0000256|HAMAP-Rule:MF_01431, ECO:0000256|SAAS:SAAS00014539}; EC=3.2.-.- {ECO:0000256|HAMAP-Rule:MF_01431, ECO:0000256|SAAS:SAAS00015510};; Cytidine/uridine-specific hydrolase {ECO:0000256|HAMAP-Rule:MF_01431}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
Pyrimidine-specific ribonucleoside hydrolase RihA n=52 Tax=Escherichia RepID=D2NF23_ECOS5
putative purine nucleoside hydrolase
Displaying items 1-30 of 42 in total

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