ggKbase home page

69_002_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 38 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_002_scaffold_72_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170..832
DNA (663bp) protein (221aa)
Aldo-keto reductase n=1 Tax=Escherichia coli HVH 198 (4-3206106) RepID=T7UHK9_ECOLX
yghZ; aldo-keto reductase
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:ESD41224.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
69_002_scaffold_72_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(872..1366)
DNA (495bp) protein (165aa)
UPF0114 protein YqhA n=1346 Tax=Enterobacteriaceae RepID=YQHA_ECO24
hypothetical protein
UPF0114 protein YqhA {ECO:0000256|HAMAP-Rule:MF_00143}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C2.;"
69_002_scaffold_72_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1557..2441
DNA (885bp) protein (295aa)
Oxidoreductase n=14 Tax=Escherichia coli RepID=L2ZG29_ECOLX
Putative oxidoreductase {ECO:0000313|EMBL:EGI14683.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
yghA; glutathionylspermidine synthase, with NAD(P)-binding Rossmann-fold domain
69_002_scaffold_72_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2480..2905)
DNA (426bp) protein (142aa)
Biopolymer transport protein ExbD n=1371 Tax=Enterobacteriaceae RepID=EXBD_ECO57
exbD; biopolymer transport protein ExbD; K03559 biopolymer transport protein ExbD
Biopolymer transporter exbD {ECO:0000313|EMBL:EOU88077.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
69_002_scaffold_72_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2912..3646)
DNA (735bp) protein (245aa)
Biopolymer transport protein ExbB n=1313 Tax=Enterobacteriaceae RepID=EXBB_ECO57
exbB; membrane spanning protein in TonB-ExbB-ExbD complex; K03561 biopolymer transport protein ExbB
TonB-system energizer ExbB {ECO:0000313|EMBL:EZJ36172.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
69_002_scaffold_72_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3898..5085
DNA (1188bp) protein (396aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:KEJ55554.1}; EC=4.4.1.8 {ECO:0000313|EMBL:KEJ55554.1};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Cystathionine beta-lyase n=36 Tax=Escherichia coli RepID=D2NMK3_ECOS5
cystathionine beta-lyase
69_002_scaffold_72_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5225..5884
DNA (660bp) protein (220aa)
Inner membrane protein YghB n=1188 Tax=Enterobacteriaceae RepID=YGHB_ECO57
hypothetical protein
Inner membrane protein YghB {ECO:0000313|EMBL:ELD96972.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
69_002_scaffold_72_8
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5924..6880)
DNA (957bp) protein (319aa)
Uncharacterized protein n=7 Tax=Enterobacteriaceae RepID=I2QYT1_9ESCH
AraC family transcriptional regulator
YqhC protein {ECO:0000313|EMBL:CEP56325.1}; TaxID=42897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 2a.;"
69_002_scaffold_72_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7017..8180
DNA (1164bp) protein (388aa)
yqhD; alcohol dehydrogenase yqhD (EC:1.1.1.-); K08325 NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:EII48497.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EII48497.1};; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
Alcohol dehydrogenase YqhD n=431 Tax=Enterobacteriaceae RepID=YQHD_ECOLI
69_002_scaffold_72_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8285..9112
DNA (828bp) protein (276aa)
dkgA; 2,5-diketo-D-gluconate reductase A (EC:1.1.1.274); K06221 2,5-diketo-D-gluconate reductase A [EC:1.1.1.274]
2,5-diketo-D-gluconic acid reductase A n=219 Tax=Enterobacteriaceae RepID=E2QE26_ECOLX
2,5-diketo-D-gluconic acid reductase A {ECO:0000313|EMBL:ETJ24595.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
69_002_scaffold_72_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9312..10238
DNA (927bp) protein (309aa)
Uncharacterized protein n=28 Tax=Escherichia coli RepID=D2NMK8_ECOS5
yqhG; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ55559.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_002_scaffold_72_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10289..10546
DNA (258bp) protein (86aa)
Uncharacterized lipoprotein YqhH n=790 Tax=Bacteria RepID=YQHH_ECOLI
yqhH; outer membrane lipoprotein
Membrane protein {ECO:0000313|EMBL:KDV41348.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
69_002_scaffold_72_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10588..12807)
DNA (2220bp) protein (740aa)
UPF0313 protein YgiQ n=29 Tax=Escherichia RepID=D2NML0_ECOS5
hypothetical protein
UPF0313 protein YgiQ {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_72_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13059..13808
DNA (750bp) protein (250aa)
GntR-family transcriptional regulator Uxu n=124 Tax=Escherichia RepID=D5D0P1_ECOKI
putative transcriptional repressor protein
Putative transcriptional regulator {ECO:0000313|EMBL:BAI56385.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_72_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14131..15603
DNA (1473bp) protein (491aa)
uxuB2; D-mannonate oxidoreductase (EC:1.1.1.57)
D-mannonate oxidoreductase n=29 Tax=Escherichia coli RepID=G0DDH6_ECOLX
Putative oxidoreductase {ECO:0000313|EMBL:BAI56386.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_72_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15600..16616
DNA (1017bp) protein (339aa)
Sorbitol dehydrogenase n=45 Tax=Escherichia RepID=F3U569_ECOLX
putative zinc-binding dehydrogenase
Galactonate oxidoreductase {ECO:0000313|EMBL:AJO85093.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_002_scaffold_72_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16627..17637
DNA (1011bp) protein (337aa)
putative malate/L-lactate dehydrogenase (EC:1.1.1.37)
Ureidoglycolate dehydrogenase n=29 Tax=Escherichia coli RepID=L2ZF71_ECOLX
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Ureidoglycolate dehydrogenase {ECO:0000313|EMBL:CDN83756.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_002_scaffold_72_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17710..18693
DNA (984bp) protein (328aa)
DctP family TRAP transporter solute receptor n=29 Tax=Escherichia coli RepID=L2ZG56_ECOLX
putative dicarboxylate-binding periplasmic protein
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Putative c4-dicarboxylate transport system binding protein {ECO:0000313|EMBL:CDN83757.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_002_scaffold_72_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18735..19217
DNA (483bp) protein (161aa)
Predicted TRAP-type C4-dicarboxylate transport system, small permease component n=191 Tax=Escherichia RepID=B7UIS2_ECO27
TRAP-type C4-dicarboxylate transport system, small permease component
Tripartite ATP-independent periplasmic transporter, DctQ family {ECO:0000313|EMBL:EHU51453.1}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
69_002_scaffold_72_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19228..20532
DNA (1305bp) protein (435aa)
C4-dicarboxylate permease n=76 Tax=Escherichia RepID=E2QE36_ECOLX
c4-dicarboxylate permease
C4-dicarboxylate permease {ECO:0000313|EMBL:EGI14700.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
69_002_scaffold_72_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20603..22015)
DNA (1413bp) protein (471aa)
Cell division protein FtsP n=1045 Tax=Enterobacteriaceae RepID=C3SUI2_ECOLX
sufI; protein SufI
Cell division protein FtsP {ECO:0000256|HAMAP-Rule:MF_00915}; Flags: Precursor;; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain 55989 / EAEC).;"
69_002_scaffold_72_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22090..22827)
DNA (738bp) protein (246aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
1-acyl-sn-glycerol-3-phosphate acyltransferase n=30 Tax=Enterobacteriaceae RepID=D2NML9_ECOS5
1-acyl-sn-glycerol-3-phosphate acyltransferase
69_002_scaffold_72_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23062..25320)
DNA (2259bp) protein (753aa)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
DNA topoisomerase 4 subunit A n=10 Tax=Escherichia coli RepID=D2NMM1_ECOS5
DNA topoisomerase IV subunit A
69_002_scaffold_72_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25656..27065)
DNA (1410bp) protein (470aa)
ABC transporter periplasmic-binding protein n=10 Tax=Escherichia coli RepID=L2ZH10_ECOLX
putative oligipeptide transport protein
Putative oligipeptide transport protein {ECO:0000313|EMBL:BAI56396.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_72_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27174..27656)
DNA (483bp) protein (161aa)
Uncharacterized protein n=27 Tax=Escherichia RepID=D2NMM3_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI56397.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_72_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27709..28101)
DNA (393bp) protein (131aa)
Protein YgiW n=1245 Tax=Enterobacteriaceae RepID=YGIW_ECO57
ygiW; hypothetical protein
Protein ygiW {ECO:0000313|EMBL:CDK46905.1}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
69_002_scaffold_72_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28253..28912
DNA (660bp) protein (220aa)
Two-component response regulator n=10 Tax=Escherichia coli RepID=D2NMM5_ECOS5
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:BAI56399.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_72_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28909..30258
DNA (1350bp) protein (450aa)
Two-component sensor kinase n=22 Tax=Escherichia coli RepID=D2NMM6_ECOS5
two-component sensor kinase
Two-component sensor kinase {ECO:0000313|EMBL:BAI56400.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_72_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30304..30636)
DNA (333bp) protein (111aa)
Uncharacterized protein n=307 Tax=Escherichia RepID=B7MA94_ECO45
hypothetical protein
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Inner membrane protein ygiZ {ECO:0000313|EMBL:CDN83768.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_002_scaffold_72_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30643..31353)
DNA (711bp) protein (237aa)
Uncharacterized protein n=18 Tax=Escherichia coli RepID=D2NMM8_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI56402.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
Displaying items 1-30 of 38 in total

View Taxonomy