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69_002_scaffold_87

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_002_scaffold_87_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..2046
DNA (2046bp) protein (682aa)
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=1 Tax=Escherichia coli O150:H5 (strain SE15) RepID=D2NKR7_ECOS5
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000256|HAMAP-Rule:MF_01102, ECO:0000256|SAAS:SAAS00084295}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000256|HAMAP-Rule:MF_01102};; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
hypothetical protein
69_002_scaffold_87_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2167..2445)
DNA (279bp) protein (93aa)
Uncharacterized protein yfcL n=393 Tax=Escherichia RepID=E2QPI6_ECOLX
yfcL; hypothetical protein
Putative cytoplasmic protein {ECO:0000313|EMBL:EGI50152.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
69_002_scaffold_87_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2479..3027)
DNA (549bp) protein (183aa)
Uncharacterized protein n=406 Tax=Enterobacteriaceae RepID=B7LBI0_ECO55
yfcM; hypothetical protein; K09906 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU21962.1}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
69_002_scaffold_87_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3027..3836)
DNA (810bp) protein (270aa)
Inner membrane protein yfcA n=241 Tax=Escherichia RepID=E2QPI8_ECOLX
yfcA; Inner membrane protein yfcA
Uncharacterized protein {ECO:0000313|EMBL:ESD06711.1}; TaxID=1268982 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907672.;"
69_002_scaffold_87_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3836..4660)
DNA (825bp) protein (275aa)
mepA; Precursor of penicillin insensitive murein endopeptidase; K07261 penicillin-insensitive murein endopeptidase [EC:3.4.24.-]
Penicillin-insensitive murein endopeptidase {ECO:0000256|HAMAP-Rule:MF_01623, ECO:0000256|SAAS:SAAS00067071}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01623, ECO:0000256|SAAS:SAAS00067077};; D-alanyl-D-alanine-endopeptidase {ECO:0000256|HAMAP-Rule:MF_01623}; Flags: Precursor;; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
Penicillin-insensitive murein endopeptidase n=42 Tax=Escherichia RepID=G0D6B3_ECOLX
69_002_scaffold_87_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4664..5749)
DNA (1086bp) protein (362aa)
aroC; Chorismate synthase (EC:4.2.3.5); K01736 chorismate synthase [EC:4.2.3.5]
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Chorismate synthase n=38 Tax=Escherichia coli RepID=D2NKS2_ECOS5
69_002_scaffold_87_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5784..6716)
DNA (933bp) protein (311aa)
yfcB; putative adenine specific methylase; K07320 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72]
50S ribosomal protein L3 glutamine methyltransferase n=71 Tax=Escherichia coli RepID=D2NKS3_ECOS5
SAM-dependent methyltransferase {ECO:0000313|EMBL:AJO84342.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_002_scaffold_87_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6882..7433
DNA (552bp) protein (184aa)
UPF0115 protein YfcN n=794 Tax=Enterobacteriaceae RepID=YFCN_ECO24
hypothetical protein
UPF0115 protein YfcN {ECO:0000256|HAMAP-Rule:MF_01042}; TaxID=1446583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H25 str. 07-3858.;"
69_002_scaffold_87_9
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7493..8317)
DNA (825bp) protein (275aa)
Fimbrial protein n=1 Tax=Escherichia coli LAU-EC7 RepID=V8LBN7_ECOLX
yfcO; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC83434.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
69_002_scaffold_87_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8319..8846)
DNA (528bp) protein (176aa)
Minor fimbrial subunit StfG n=47 Tax=Escherichia RepID=F5M9D9_ECOLX
fimbrial protein
Putative minor fimbrial subunit {ECO:0000313|EMBL:BAI55750.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_87_11
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8843..9322)
DNA (480bp) protein (160aa)
Fimbrial-like adhesin protein n=30 Tax=Escherichia RepID=L2YFC1_ECOLX
putative minor fimbrial subunit
Putative minor fimbrial subunit {ECO:0000313|EMBL:CDC83428.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
69_002_scaffold_87_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9319..9810)
DNA (492bp) protein (164aa)
Fimbrial protein YfcR n=49 Tax=Escherichia RepID=L2X9X1_ECOLX
yfcR; putative fimbrial protein
Putative fimbrial protein {ECO:0000313|EMBL:BAI55752.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_87_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9827..10579)
DNA (753bp) protein (251aa)
Gram-negative pili assembly chaperone domain protein n=40 Tax=Escherichia coli RepID=U9ZD45_ECOLX
yfcS; putative periplasmic fimbrial chaperone
Fimbrial protein StfD {ECO:0000313|EMBL:AJO84348.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_002_scaffold_87_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10599..13247)
DNA (2649bp) protein (883aa)
Fimbrial protein SteB n=32 Tax=Escherichia coli RepID=V8LBN2_ECOLX
Fimbriae usher protein StfC {ECO:0000313|EMBL:CDL49449.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
fimbrial protein SteB
69_002_scaffold_87_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13328..13894)
DNA (567bp) protein (189aa)
Major fimbrial subunit StfA n=49 Tax=Escherichia coli RepID=F5M9E1_ECOLX
yfcV; putative fimbrial like protein
Putative fimbrial-like protein {ECO:0000313|EMBL:BAI55755.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_87_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14453..14938)
DNA (486bp) protein (162aa)
Phosphohistidine phosphatase n=53 Tax=Escherichia RepID=D2NKT2_ECOS5
phosphohistidine phosphatase
Phosphohistidine phosphatase {ECO:0000313|EMBL:BAI55756.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_87_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15141..17285)
DNA (2145bp) protein (715aa)
Fatty acid oxidation complex subunit alpha n=32 Tax=Escherichia coli RepID=D2NKT3_ECOS5
Fatty acid oxidation complex subunit alpha {ECO:0000256|HAMAP-Rule:MF_01617, ECO:0000256|SAAS:SAAS00051619}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
hypothetical protein
69_002_scaffold_87_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17285..18595)
DNA (1311bp) protein (437aa)
3-ketoacyl-CoA thiolase {ECO:0000255|HAMAP-Rule:MF_01618}; EC=2.3.1.16 {ECO:0000255|HAMAP-Rule:MF_01618};; ACSs {ECO:0000255|HAMAP-Rule:MF_01618}; Acetyl-CoA acyltransferase {ECO:0000255|HAMAP-Rule:MF_01618}; Acyl-CoA ligase {ECO:0000255|HAMAP-Rule:MF_01618}; Beta-ketothiolase {ECO:0000255|HAMAP-Rule:MF_01618}; Fatty acid oxidation complex subunit beta {ECO:0000255|HAMAP-Rule:MF_01618}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
3-ketoacyl-CoA thiolase n=175 Tax=Escherichia RepID=FADI_ECO45
putative acyltransferase
69_002_scaffold_87_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18776..19060)
DNA (285bp) protein (95aa)
UPF0381 protein YfcZ n=679 Tax=Escherichia RepID=YFCZ_ECOL6
yfcZ; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDX90290.1}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
69_002_scaffold_87_20
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19432..20772
DNA (1341bp) protein (447aa)
Long-chain fatty acid transport protein n=40 Tax=Escherichia RepID=D2NKT6_ECOS5
fadL; Long-chain fatty acid transport protein; K06076 long-chain fatty acid transport protein
Long-chain fatty acid transport protein {ECO:0000313|EMBL:CDC83417.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
69_002_scaffold_87_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20834..21589)
DNA (756bp) protein (252aa)
Lipoprotein vacJ n=381 Tax=Escherichia RepID=Q6KCW9_ECOLX
vacJ; Lipoprotein vacJ
Lipoprotein {ECO:0000313|EMBL:CDL49463.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
69_002_scaffold_87_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21883..22815
DNA (933bp) protein (311aa)
Uncharacterized protein n=138 Tax=Escherichia RepID=B7MGW3_ECO45
yfdC; transport
Membrane protein {ECO:0000313|EMBL:AJO84357.1}; Transporter protein {ECO:0000313|EMBL:CKI30240.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_002_scaffold_87_trna_1
unknown

Not on your lists

22891..22962
DNA (72bp)
transferRNA Arg
69_002_scaffold_87_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23126..24301
DNA (1176bp) protein (392aa)
Phage integrase family protein n=4 Tax=Escherichia coli RepID=M9H895_ECOLX
putative phage integrase
Putative phage integrase {ECO:0000313|EMBL:BAI55764.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_87_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24281..25231)
DNA (951bp) protein (317aa)
Uncharacterized protein n=27 Tax=Escherichia coli RepID=D2NKU1_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIH05413.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_002_scaffold_87_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25253..26134)
DNA (882bp) protein (294aa)
Uncharacterized protein n=27 Tax=Escherichia coli RepID=D2NKU2_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIH05412.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_002_scaffold_87_26
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26814..27086)
DNA (273bp) protein (91aa)
Ogr/Delta-like zinc finger n=53 Tax=Enterobacteriaceae RepID=I0ABH4_SALET
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:KAJ99575.1}; TaxID=1387330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar 9,12:l,v:- str. 94293.;"
69_002_scaffold_87_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27369..30056)
DNA (2688bp) protein (896aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=L3XA05_ECOLX
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Hypothetical phage protein {ECO:0000313|EMBL:CDN83028.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
phage protein
69_002_scaffold_87_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30053..30463)
DNA (411bp) protein (137aa)
Uncharacterized protein n=28 Tax=Escherichia coli RepID=D2NKU5_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ57120.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_002_scaffold_87_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30456..30692)
DNA (237bp) protein (79aa)
Uncharacterized protein n=26 Tax=Escherichia coli RepID=L3KC55_ECOLX
hypothetical protein
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Uncharacterized protein {ECO:0000313|EMBL:CDN83030.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Displaying items 1-30 of 34 in total

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