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69_002_scaffold_109

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_002_scaffold_109_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..885
DNA (885bp) protein (295aa)
NAD/NADP-dependent betaine aldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00804}; Short=BADH {ECO:0000256|HAMAP-Rule:MF_00804};; EC=1.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00804};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
NAD/NADP-dependent betaine aldehyde dehydrogenase n=27 Tax=Escherichia coli RepID=G0DB74_ECOLX
betaine-aldehyde dehydrogenase
69_002_scaffold_109_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

899..2569
DNA (1671bp) protein (557aa)
Oxygen-dependent choline dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054588}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_00750};; Short=CHD {ECO:0000256|HAMAP-Rule:MF_00750};; EC=1.1.99.1 {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054587};; Betaine aldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
betA; choline dehydrogenase (EC:1.1.99.1)
Oxygen-dependent choline dehydrogenase n=29 Tax=Escherichia coli RepID=G0DB73_ECOLX
69_002_scaffold_109_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2611..2892)
DNA (282bp) protein (94aa)
Uncharacterized protein n=279 Tax=Escherichia RepID=B7MCC9_ECO45
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP59197.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
69_002_scaffold_109_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3654..4217
DNA (564bp) protein (188aa)
Type 1 fimbriae regulatory protein FimX n=355 Tax=Escherichia RepID=I2FKM0_ECOLX
putative phage integrase; K07357 type 1 fimbriae regulatory protein FimB
Type 1 fimbriae Regulatory protein FimB {ECO:0000313|EMBL:EGI47308.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
69_002_scaffold_109_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4547..5341
DNA (795bp) protein (265aa)
Transcriptional regulator, LuxR family n=54 Tax=Escherichia RepID=E9U525_ECOLX
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ESD44843.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
LuxR-type HTH domain protein
69_002_scaffold_109_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5338..5478
DNA (141bp) protein (47aa)
Uncharacterized protein n=23 Tax=Escherichia coli RepID=L2ZTR3_ECOLX
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Uncharacterized protein {ECO:0000313|EMBL:CDN80710.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
hypothetical protein
69_002_scaffold_109_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5495..6256
DNA (762bp) protein (254aa)
Uncharacterized protein n=25 Tax=Escherichia coli RepID=L2ZSQ9_ECOLX
hypothetical protein
HyxA protein; Uncharacterized protein {ECO:0000313|EMBL:CDN80709.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_002_scaffold_109_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6298..8589
DNA (2292bp) protein (764aa)
Outer membrane autotransporter barrel domain protein n=25 Tax=Escherichia coli RepID=U9Z8F6_ECOLX
Autotransporter {ECO:0000313|EMBL:AJO82237.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Putative flagellin protein
69_002_scaffold_109_9
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8773..9441
DNA (669bp) protein (223aa)
Uncharacterized protein n=95 Tax=Escherichia RepID=D2NCW7_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC80166.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
69_002_scaffold_109_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9684..10379)
DNA (696bp) protein (232aa)
Uncharacterized protein n=38 Tax=Escherichia coli RepID=L2ZUH8_ECOLX
ykgG; hypothetical protein; K00782 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ62185.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_002_scaffold_109_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10372..11799)
DNA (1428bp) protein (476aa)
Uncharacterized protein n=63 Tax=Escherichia RepID=D2NCW5_ECOS5
ykgF; putative electron transport protein
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EGI52062.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
69_002_scaffold_109_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11810..12529)
DNA (720bp) protein (240aa)
Uncharacterized protein ykgE n=422 Tax=Escherichia RepID=E2QG70_ECOLX
ykgE; putative hydroxyacid oxidoreductase (Fe-S centre)
Oxidoreductase {ECO:0000313|EMBL:EQX78524.1}; TaxID=1281210 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3190-1.;"
69_002_scaffold_109_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13055..13909)
DNA (855bp) protein (285aa)
Predicted DNA-binding transcriptional regulator n=235 Tax=Escherichia RepID=B7UJF8_ECO27
ykgD; DNA-binding transcriptional regulator
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EHU50281.1}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2C.;"
69_002_scaffold_109_14
Enterobacter sp. 35683, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14136..15461
DNA (1326bp) protein (442aa)
Oxidoreductase with FAD/NAD(P)-binding domain and dimerization domain-containing protein n=11 Tax=Enterobacteriaceae RepID=R8X1X0_9ENTR
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:KJN16541.1}; TaxID=1619251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35683.;"
ykgC; pyridine nucleotide-disulfide oxidoreductase
69_002_scaffold_109_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15818..16411
DNA (594bp) protein (198aa)
Conserved inner membrane protein n=55 Tax=Escherichia coli RepID=B7UJF5_ECO27
ykgB; Putative inner membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EHU43636.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
69_002_scaffold_109_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16571..17440)
DNA (870bp) protein (290aa)
ytbE; putative oxidoreductase YtbE (EC:1.-.-.-)
Predicted reductase n=312 Tax=Escherichia RepID=B7UJF4_ECO27
2,5-diketo-D-gluconic acid reductase A {ECO:0000313|EMBL:EQP59184.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
69_002_scaffold_109_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17688..18545
DNA (858bp) protein (286aa)
Uncharacterized HTH-type transcriptional regulator n=220 Tax=Escherichia RepID=E2QG64_ECOLX
transcriptional regulator
Transcriptional regulator, effector binding domain protein {ECO:0000313|EMBL:ESD40554.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
69_002_scaffold_109_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18670..22917)
DNA (4248bp) protein (1416aa)
Adhesin/invasin n=17 Tax=Escherichia coli RepID=L2ZUU0_ECOLX
Bacterial Ig-like domain family protein {ECO:0000313|EMBL:KEJ62176.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
putative invasin
69_002_scaffold_109_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23483..24334
DNA (852bp) protein (284aa)
organophosphate reductase (EC:1.1.1.-)
2,5-diketo-D-gluconic acid reductase A {ECO:0000313|EMBL:ABE05821.1}; EC=1.1.1.- {ECO:0000313|EMBL:ABE05821.1};; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
2,5-diketo-D-gluconic acid reductase A (EC 111-) n=348 Tax=Escherichia RepID=E2QG62_ECOLX
69_002_scaffold_109_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24361..25350
DNA (990bp) protein (330aa)
Aldo/keto reductase n=36 Tax=Escherichia coli RepID=L2ZUG6_ECOLX
Putative Aldo-keto reductase
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Putative aldo/keto reductase {ECO:0000313|EMBL:CDN80695.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_002_scaffold_109_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25381..26274)
DNA (894bp) protein (298aa)
LysR-family transcriptional regulator n=129 Tax=Escherichia coli RepID=D3GT85_ECO44
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:BAI53810.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_109_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26474..27400)
DNA (927bp) protein (309aa)
Transcriptional regulator, LysR family n=49 Tax=Escherichia RepID=F4SUB7_ECOLX
putative transcriptional regulator
Putative LysR-like transcriptional regulator {ECO:0000313|EMBL:CDL44328.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
69_002_scaffold_109_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27557..28477
DNA (921bp) protein (307aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NCV2_ECOS5
hypothetical protein; K06889
Uncharacterized protein {ECO:0000313|EMBL:CDN80692.1}; YcjY protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_002_scaffold_109_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28650..29627
DNA (978bp) protein (326aa)
NADH-dependent flavin oxidoreductase n=46 Tax=Escherichia coli RepID=L2XJP5_ECOLX
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:CDL44326.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
Displaying 24 items

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