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69_002_scaffold_115

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_002_scaffold_115_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1052)
DNA (1050bp) protein (350aa)
sucC; succinyl-CoA synthetase, beta subunit; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
Succinyl-CoA ligase [ADP-forming] subunit beta n=2 Tax=Escherichia coli RepID=I4SLZ3_ECOLX
69_002_scaffold_115_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1146..2363)
DNA (1218bp) protein (406aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
2-oxoglutarate dehydrogenase E2 component n=47 Tax=Escherichia RepID=D2NF93_ECOS5
2-oxoglutarate dehydrogenase E2 component
69_002_scaffold_115_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2378..5179)
DNA (2802bp) protein (934aa)
sucA1; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2); K00164 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
2-oxoglutarate dehydrogenase E1 component n=36 Tax=Escherichia coli RepID=D2NF92_ECOS5
2-oxoglutarate dehydrogenase {ECO:0000313|EMBL:AJO82600.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_002_scaffold_115_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5541..6257)
DNA (717bp) protein (239aa)
sdhB; succinate dehydrogenase iron-sulfur subunit (EC:1.3.99.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
Succinate dehydrogenase n=1180 Tax=Enterobacteriaceae RepID=C3TIN2_ECOLX
69_002_scaffold_115_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6273..8039)
DNA (1767bp) protein (589aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=679205 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 124-1.;"
sdhA; succinate dehydrogenase flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1]
Succinate dehydrogenase, flavoprotein subunit n=1 Tax=Escherichia coli TA280 RepID=F4UZT2_ECOLX
69_002_scaffold_115_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8039..8386)
DNA (348bp) protein (116aa)
Succinate dehydrogenase hydrophobic membrane anchor subunit n=1105 Tax=Enterobacteriaceae RepID=DHSD_ECOL6
sdhD; succinate dehydrogenase cytochrome b556 small membrane subunit; K00242 succinate dehydrogenase membrane anchor subunit
Succinate dehydrogenase, hydrophobic membrane anchor protein {ECO:0000313|EMBL:EHW24027.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
69_002_scaffold_115_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8380..8784)
DNA (405bp) protein (135aa)
Succinate dehydrogenase cytochrome b556 subunit n=1 Tax=Escherichia coli HVH 79 (4-2512823) RepID=T6JUF6_ECOLX
sdhC; succinate dehydrogenase cytochrome b556 large membrane subunit; K00241 succinate dehydrogenase cytochrome b556 subunit
Succinate dehydrogenase cytochrome b556 subunit {ECO:0000313|EMBL:EOV97513.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
69_002_scaffold_115_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9165..9272
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Escherichia coli O81 (strain ED1a) RepID=B7MPL4_ECO81
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQN32150.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
69_002_scaffold_115_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9478..10761
DNA (1284bp) protein (428aa)
gltA; type II citrate synthase; K01647 citrate synthase [EC:2.3.3.1]
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
Citrate synthase n=48 Tax=Escherichia coli RepID=B7NMS1_ECO7I
69_002_scaffold_115_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10808..12118)
DNA (1311bp) protein (437aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NF86_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI54192.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_115_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12118..12579)
DNA (462bp) protein (154aa)
Uncharacterized protein n=38 Tax=Escherichia coli RepID=D2NF85_ECOS5
hypothetical protein
C4-dicarboxylate ABC transporter permease {ECO:0000313|EMBL:AJO82593.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_002_scaffold_115_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12639..13607)
DNA (969bp) protein (323aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NF84_ECOS5
hypothetical protein
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:AJO82592.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_002_scaffold_115_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13635..14831)
DNA (1197bp) protein (399aa)
Truncated altronate dehydratase n=38 Tax=Escherichia coli RepID=D2NF83_ECOS5
truncated altronate dehydratase
Hydrolase {ECO:0000313|EMBL:AJO82591.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_002_scaffold_115_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14831..15142)
DNA (312bp) protein (104aa)
Truncated altronate dehydratase n=38 Tax=Escherichia coli RepID=D2NF82_ECOS5
truncated altronate dehydratase
Truncated altronate dehydratase {ECO:0000313|EMBL:BAI54188.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_115_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15232..15912)
DNA (681bp) protein (227aa)
Uncharacterized protein n=38 Tax=Escherichia coli RepID=L2ZRU9_ECOLX
putative gluconate 5-dehydrogenase
Short chain dehydrogenase family protein {ECO:0000313|EMBL:KEJ61297.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_002_scaffold_115_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15924..16937)
DNA (1014bp) protein (338aa)
Alcohol dehydrogenase n=37 Tax=Escherichia coli RepID=D2NF80_ECOS5
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:BAI54186.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_115_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16950..17603)
DNA (654bp) protein (218aa)
Demethylmenaquinone methyltransferase n=41 Tax=Escherichia coli RepID=V8JKS5_ECOLX
putative demethylmenaquinone methyltransferase
Putative demethylmenaquinone methyltransferase {ECO:0000313|EMBL:BAI54185.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_115_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17900..18613
DNA (714bp) protein (238aa)
Uncharacterized protein n=38 Tax=Escherichia coli RepID=L2ZTM0_ECOLX
putative transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AJO82587.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_002_scaffold_115_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18793..19839
DNA (1047bp) protein (349aa)
Protein AbrB n=27 Tax=Escherichia coli RepID=L2ZSU0_ECOLX
abrB; Putative transport protein; K07120
AbrB protein; Putative transport protein AbrB {ECO:0000313|EMBL:CDN81077.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_002_scaffold_115_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19836..20627)
DNA (792bp) protein (264aa)
Endonuclease 8 n=31 Tax=Escherichia coli RepID=D2NF76_ECOS5
endonuclease VIII
Endonuclease 8 {ECO:0000256|HAMAP-Rule:MF_01253}; DNA glycosylase/AP lyase Nei {ECO:0000256|HAMAP-Rule:MF_01253}; DNA-(apurinic or apyrimidinic site) lyase Nei {ECO:0000256|HAMAP-Rule:MF_01253}; Endonuclease VIII {ECO:0000256|HAMAP-Rule:MF_01253}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_115_21
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20663..21397)
DNA (735bp) protein (245aa)
UPF0271 protein YbgL n=50 Tax=Escherichia RepID=D2NF75_ECOS5
ybgL; LamB/YcsF family protein; K07160 UPF0271 protein
UPF0271 protein YbgL {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
69_002_scaffold_115_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21387..22319)
DNA (933bp) protein (311aa)
ybgK; Putative Allophanate hydrolase subunit 2 (EC:3.5.1.54)
Biotin-dependent carboxylase domain protein n=57 Tax=Escherichia coli RepID=D8A878_ECOLX
Allophanate hydrolase subunit 2 {ECO:0000313|EMBL:EOU95215.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
69_002_scaffold_115_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22313..22969)
DNA (657bp) protein (219aa)
Predicted carboxylase subunit n=52 Tax=Escherichia coli RepID=B7UKY4_ECO27
putative carboxylase
Putative carboxylase {ECO:0000313|EMBL:BAI54179.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_115_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22992..23735)
DNA (744bp) protein (248aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Metal-binding protein n=42 Tax=Escherichia coli RepID=U5SF11_ECOLX
ybgI; hypothetical protein
69_002_scaffold_115_25
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24006..25487
DNA (1482bp) protein (494aa)
Dipeptide permease D n=318 Tax=Escherichia RepID=E2QI86_ECOLX
ybgH; putative transporter YbgH; K03305 proton-dependent oligopeptide transporter, POT family
Dipeptide permease D {ECO:0000256|HAMAP-Rule:MF_01880}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
69_002_scaffold_115_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25529..26947)
DNA (1419bp) protein (473aa)
phrB; Deoxyribodipyrimidine photolyase (EC:4.1.99.3); K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Deoxyribodipyrimidine photolyase n=36 Tax=Escherichia coli RepID=D2NF70_ECOS5
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:CDN81070.1}; PhrB protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_002_scaffold_115_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26944..27453)
DNA (510bp) protein (170aa)
Uncharacterized protein n=39 Tax=Escherichia coli RepID=D2NF69_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI54175.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_115_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27554..27760)
DNA (207bp) protein (69aa)
Uncharacterized protein ybfA n=319 Tax=Escherichia RepID=E2QI83_ECOLX
ybfA; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU18397.1}; TaxID=868134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1B.;"
69_002_scaffold_115_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28162..28956
DNA (795bp) protein (265aa)
potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
Potassium-transporting ATPase A chain n=4 Tax=Escherichia coli RepID=L3XK12_ECOLX
Displaying 29 items

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