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69_002_scaffold_126

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_002_scaffold_126_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1897
DNA (1896bp) protein (632aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
deaD; ATP-dependent RNA helicase DeaD; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
ATP-dependent RNA helicase DeaD n=1 Tax=Escherichia coli MS 187-1 RepID=D7ZTR1_ECOLX
69_002_scaffold_126_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2051..3295
DNA (1245bp) protein (415aa)
Tryptophan transport protein n=36 Tax=Escherichia coli RepID=D2NN11_ECOS5
tryptophan transport protein
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Tryptophan-specific transport protein {ECO:0000313|EMBL:CDN83907.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_002_scaffold_126_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3413..4420)
DNA (1008bp) protein (336aa)
Luciferase family oxidoreductase, FMN-dependent, PP_0088 family {ECO:0000313|EMBL:EFJ97251.1}; EC=1.-.-.- {ECO:0000313|EMBL:EFJ97251.1};; TaxID=749537 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 115-1.;"
Uncharacterized protein YhbW n=714 Tax=Enterobacteriaceae RepID=YHBW_ECOL6
yhbW; putative enzyme
69_002_scaffold_126_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4501..5379)
DNA (879bp) protein (293aa)
Uncharacterized protein yhbV n=133 Tax=Escherichia RepID=E2QEJ4_ECOLX
yhbV; Peptidase, U32 family
Peptidase family U32 family protein {ECO:0000313|EMBL:EGE63626.1}; TaxID=754082 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_7v.;"
69_002_scaffold_126_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5388..6383)
DNA (996bp) protein (332aa)
Protease n=42 Tax=Escherichia RepID=L2ZGH5_ECOLX
putative protease
Putative protease {ECO:0000313|EMBL:BAI56532.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_126_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6592..7116
DNA (525bp) protein (175aa)
Uncharacterized protein YhbT n=1119 Tax=Enterobacteriaceae RepID=YHBT_ECO57
hypothetical protein
SCP-2 sterol transfer family protein {ECO:0000313|EMBL:EID68135.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
69_002_scaffold_126_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7110..7613
DNA (504bp) protein (168aa)
Uncharacterized protein n=33 Tax=Escherichia coli RepID=D2NN06_ECOS5
N-acetyltransferase
Uncharacterized protein {ECO:0000313|EMBL:BAI56530.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_126_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7600..7902)
DNA (303bp) protein (101aa)
UPF0213 protein YhbQ n=35 Tax=Escherichia RepID=L2X709_ECOLX
GIY-YIG nuclease
UPF0213 protein YhbQ {ECO:0000256|HAMAP-Rule:MF_01029}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_002_scaffold_126_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7953..8396
DNA (444bp) protein (148aa)
UPF0306 protein YhbP n=217 Tax=Escherichia RepID=YHBP_ECO45
hypothetical protein; K09979 hypothetical protein
UPF0306 protein YhbP {ECO:0000256|HAMAP-Rule:MF_00764}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_126_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8376..8894)
DNA (519bp) protein (173aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NN03_ECOS5
general stress protein
General stress protein 18 {ECO:0000313|EMBL:CDL42459.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
69_002_scaffold_126_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9022..9657
DNA (636bp) protein (212aa)
Oxidoreductase {ECO:0000313|EMBL:CDL42458.1}; EC=1.1.1.- {ECO:0000313|EMBL:CDL42458.1};; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NN02_ECOS5
hypothetical protein
69_002_scaffold_126_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9730..10770
DNA (1041bp) protein (347aa)
Uncharacterized protein n=57 Tax=Escherichia coli RepID=D2NN01_ECOS5
yraQ; hypothetical protein; K07089
FIG006303: protein yraQ {ECO:0000313|EMBL:CDL42457.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
69_002_scaffold_126_13
Escherichia sp. KTE31, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10883..11458)
DNA (576bp) protein (192aa)
Uncharacterized protein YraP n=1098 Tax=Enterobacteriaceae RepID=YRAP_ECO57
transport-associated protein
Uncharacterized protein {ECO:0000313|EMBL:EOU77672.1}; TaxID=1169349 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE31.;"
69_002_scaffold_126_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11468..12058)
DNA (591bp) protein (197aa)
DnaA initiator-associating protein DiaA n=768 Tax=Enterobacteriaceae RepID=DIAA_ECO24
yraO; DnaA initiator-associating protein DiaA; K12961 DnaA initiator-associating protein
DnaA initiator-associating protein DiaA {ECO:0000256|HAMAP-Rule:MF_01157, ECO:0000256|SAAS:SAAS00014432}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
69_002_scaffold_126_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12078..12473)
DNA (396bp) protein (132aa)
UPF0102 protein YraN n=305 Tax=Escherichia RepID=YRAN_ECO45
yraN; hypothetical protein; K07460 putative endonuclease
UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_002_scaffold_126_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12431..14467)
DNA (2037bp) protein (679aa)
Penicillin-binding protein activator LpoA n=40 Tax=Escherichia coli RepID=D2NMZ7_ECOS5
penicillin-binding protein activator LpoA
Penicillin-binding protein activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890}; Short=PBP activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890};; Flags: Precursor;; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_126_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14532..15395
DNA (864bp) protein (288aa)
yraL; putative methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Ribosomal RNA small subunit methyltransferase I n=123 Tax=Escherichia coli RepID=E2QEI2_ECOLX
69_002_scaffold_126_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15445..16158)
DNA (714bp) protein (238aa)
Glucosamine-6-phosphate deaminase n=25 Tax=Escherichia coli RepID=L2ZFM0_ECOLX
Galactosamine-6-phosphate isomerase {ECO:0000313|EMBL:AJO85218.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
putative galactosamine-6-phosphate isomerase
69_002_scaffold_126_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16213..17004)
DNA (792bp) protein (264aa)
Galactosamine-specific PTS system enzyme IID component n=1112 Tax=Enterobacteriaceae RepID=C3ST22_ECOLX
agaD2; PTS system N-acetylgalactosamine-specific transporter subunit IID; K10986 PTS system, galactosamine-specific IID component
N-acetylgalactosamine-specific PTS system transporter subunit IID {ECO:0000313|EMBL:AFJ30816.1}; TaxID=741093 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli Xuzhou21.;"
69_002_scaffold_126_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16994..17797)
DNA (804bp) protein (268aa)
N-acetylgalactosamine permease IIC component 1 n=625 Tax=Enterobacteriaceae RepID=PTPC1_ECOLI
agaC; N-acetylgalactosamine-specific enzyme IIC component of PTS; K10985 PTS system, galactosamine-specific IIC component
N-acetylgalactosamine-specific PTS system transporter subunit IIC {ECO:0000313|EMBL:EFF11780.2}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B354.;"
69_002_scaffold_126_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17836..18312)
DNA (477bp) protein (159aa)
PTS system N-acetylgalactosamine-specific IIB component n=53 Tax=Escherichia RepID=D2NMZ2_ECOS5
PTS N-acetylgalactosamine transporter subunit IIB
PTS system N-acetylgalactosamine-specific IIB component {ECO:0000313|EMBL:BAI56516.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_126_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18479..19339)
DNA (861bp) protein (287aa)
D-tagatose-1,6-bisphosphate aldolase subunit KbaY {ECO:0000256|HAMAP-Rule:MF_01293}; Short=TBPA {ECO:0000256|HAMAP-Rule:MF_01293};; Short=TagBP aldolase {ECO:0000256|HAMAP-Rule:MF_01293};; EC=4.1.2.40 {ECO:0000256|HAMAP-Rule:MF_01293};; D-tagatose-bisphosphate aldolase class II {ECO:0000256|HAMAP-Rule:MF_01293}; Ketose 1,6-bisphosphate aldolase class II {ECO:0000256|HAMAP-Rule:MF_01293}; Tagatose-bisphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_01293}; TaxID=431946 species="Bacteria; Proteobacteria; Gammapr
D-tagatose-1,6-bisphosphate aldolase subunit KbaY n=36 Tax=Escherichia coli RepID=D2NMZ1_ECOS5
tagatose-bisphosphate aldolase
69_002_scaffold_126_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19352..20506)
DNA (1155bp) protein (385aa)
Tagatose-6-phosphate isomerase n=50 Tax=Escherichia coli RepID=G0D0N1_ECOLX
putative tagatose-6-phosphate ketose/aldose isomerase
AgaS protein; Putative tagatose-6-phosphate ketose/aldose isomerase {ECO:0000313|EMBL:CDN83886.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_002_scaffold_126_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20856..21989)
DNA (1134bp) protein (378aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
N-acetylglucosamine-6-phosphate deacetylase n=36 Tax=Escherichia coli RepID=D2NMY9_ECOS5
N-acetylglucosamine-6-phosphate deacetylase
69_002_scaffold_126_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21986..22420)
DNA (435bp) protein (145aa)
putative phosphotransferase system protein; K02744 PTS system, N-acetylgalactosamine-specific IIA component [EC:2.7.1.69]
Phosphotransferase system enzyme subunit IIA component n=941 Tax=Enterobacteriaceae RepID=E2QEH4_ECOLX
PTS system fructose IIA component {ECO:0000313|EMBL:EFJ85989.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
69_002_scaffold_126_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22438..23316)
DNA (879bp) protein (293aa)
agaE; N-acetylgalactosamine-specific IID component of PTS system (EC:2.7.1.69); K02747 PTS system, N-acetylgalactosamine-specific IID component
PTS system N-acetylgalactosamine-specific, IID component n=765 Tax=Enterobacteriaceae RepID=A8A4U9_ECOHS
PTS system N-acetylgalactosamine-specific IID component {ECO:0000313|EMBL:BAI56511.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_126_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23306..24085)
DNA (780bp) protein (260aa)
N-acetylgalactosamine permease IIC component 2 n=1162 Tax=Enterobacteriaceae RepID=C3ST47_ECOLX
N-acetylgalactosamine-specific enzyme IIC component of PTS; K02746 PTS system, N-acetylgalactosamine-specific IIC component
Uncharacterized protein {ECO:0000313|EMBL:EHP65746.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
69_002_scaffold_126_28
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24096..24569)
DNA (474bp) protein (158aa)
PTS system, N-acetylgalactosamine-specific, IIB component n=754 Tax=Enterobacteriaceae RepID=A8A4U7_ECOHS
PTS system N-acetylgalactosamine-specific transporter subunit IIB
Galactosamine-specific PTS system enzyme IIB component {ECO:0000313|EMBL:EIQ26206.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
69_002_scaffold_126_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24592..25872)
DNA (1281bp) protein (427aa)
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ n=47 Tax=Escherichia RepID=D2NMY4_ECOS5
putative tagatose 6-phosphate kinase
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ {ECO:0000256|HAMAP-Rule:MF_01295}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_126_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26121..26885
DNA (765bp) protein (255aa)
DeoR-like helix-turn-helix domain protein n=2 Tax=Escherichia coli RepID=N2U4J0_ECOLX
agaR; DNA-binding transcriptional repressor of the aga regulon; K02081 DeoR family transcriptional regulator, aga operon transcriptional repressor
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EFJ67979.1}; TaxID=749544 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 175-1.;"
Displaying 30 items

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