ggKbase home page

69_002_scaffold_155

Search features with annotation key words

Displaying 24 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_002_scaffold_155_1
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146..580)
DNA (435bp) protein (145aa)
Translation initiation factor IF-3 n=1320 Tax=Enterobacteriaceae RepID=E2QMS8_ECOLX
infC; translation initiation factor IF-3; K02520 translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1064551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Thompson str. RM6836.;"
69_002_scaffold_155_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(692..2620)
DNA (1929bp) protein (643aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase {ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|SAAS:SAAS00106033};; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
Threonine--tRNA ligase n=104 Tax=Escherichia RepID=D2NIZ5_ECOS5
69_002_scaffold_155_3
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3144..3431
DNA (288bp) protein (96aa)
Uncharacterized protein n=27 Tax=Escherichia RepID=D2NIZ6_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC79025.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
69_002_scaffold_155_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4339..4446
DNA (108bp) protein (36aa)
Putative uncharacterized protein n=1 Tax=Escherichia coli EC4100B RepID=E7UR35_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV97921.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
69_002_scaffold_155_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4499..5257)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1146 Tax=Enterobacteriaceae RepID=C3T7N7_ECOLX
ydiY; hypothetical protein; K07283 putative salt-induced outer membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EHU11295.1}; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
69_002_scaffold_155_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5543..6472
DNA (930bp) protein (310aa)
pfkB; 6-phosphofructokinase (EC:2.7.1.11); K00850 6-phosphofructokinase [EC:2.7.1.11]
6-phosphofructokinase {ECO:0000313|EMBL:AJO83656.1}; EC=2.7.1.11 {ECO:0000313|EMBL:AJO83656.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Phosphofructokinase n=50 Tax=Escherichia RepID=D2NJ01_ECOS5
69_002_scaffold_155_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6573..6863
DNA (291bp) protein (97aa)
Uncharacterized protein n=216 Tax=Escherichia coli RepID=D2NJ02_ECOS5
ydiZ; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI55126.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_155_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6969..7829
DNA (861bp) protein (287aa)
Uncharacterized protein yniA n=515 Tax=Enterobacteriaceae RepID=E2QMT4_ECOLX
yniA; phosphotransferase/kinase
Fructosamine kinase {ECO:0000313|EMBL:EFK19633.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
69_002_scaffold_155_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7870..8406)
DNA (537bp) protein (179aa)
Uncharacterized protein n=681 Tax=Enterobacteriaceae RepID=J7R1P9_ECOLX
hypothetical protein
YniB-like family protein {ECO:0000313|EMBL:ENB13409.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
69_002_scaffold_155_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8553..9221
DNA (669bp) protein (223aa)
HAD-superfamily hydrolase, subfamily IA n=266 Tax=Escherichia RepID=D5D3X8_ECOKI
yniC; 2-deoxyglucose-6-phosphatase
Uncharacterized protein {ECO:0000313|EMBL:CDN82231.1}; YniC protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_002_scaffold_155_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9385..9975
DNA (591bp) protein (197aa)
Inner membrane protein ydjM n=908 Tax=Enterobacteriaceae RepID=C3T7K7_ECOLX
ydjM; hypothetical protein; K07038 inner membrane protein
Inner membrane protein ydjM {ECO:0000313|EMBL:EMX19570.1}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.1.;"
69_002_scaffold_155_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10108..11499
DNA (1392bp) protein (464aa)
Uncharacterized symporter ydjN n=265 Tax=Escherichia RepID=E2QMT8_ECOLX
hypothetical protein
Dicarboxylate symporter family protein {ECO:0000313|EMBL:KEJ58867.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_002_scaffold_155_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11546..11809)
DNA (264bp) protein (88aa)
Cell division modulator n=327 Tax=Escherichia RepID=B7MVL0_ECO81
cell division modulator; K15722 cell division activator
Cell division activator CedA {ECO:0000256|HAMAP-Rule:MF_01580}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
69_002_scaffold_155_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11992..14253
DNA (2262bp) protein (754aa)
katE; hydroperoxidase II (EC:1.11.1.6)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Catalase n=4 Tax=Escherichia coli RepID=L3XET9_ECOLX
69_002_scaffold_155_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14300..15058)
DNA (759bp) protein (253aa)
Chitooligosaccharide deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Short=COD {ECO:0000256|HAMAP-Rule:MF_01246};; EC=3.5.1.105 {ECO:0000256|HAMAP-Rule:MF_01246};; Chitin disaccharide deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitobiose deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitobiose-6P deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitotriose deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; Chitotriose-6P deacetylase {ECO:0000256|HAMAP-Rule:MF_01246}; TaxID=1432559 species="Bacteria; Proteobac
UPF0249 protein ChbG n=36 Tax=Escherichia coli RepID=D2NJ10_ECOS5
ydjC; hypothetical protein; K03478 hypothetical protein
69_002_scaffold_155_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15071..16423)
DNA (1353bp) protein (451aa)
phospho-beta-glucosidase; K01222 6-phospho-beta-glucosidase [EC:3.2.1.86]
6-phospho-beta-glucosidase {ECO:0000313|EMBL:KDW82440.1}; EC=3.2.1.86 {ECO:0000313|EMBL:KDW82440.1};; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
Phospho-beta-glucosidase n=276 Tax=Escherichia coli RepID=C3T7H7_ECOLX
69_002_scaffold_155_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16526..17365)
DNA (840bp) protein (280aa)
HTH-type transcriptional regulator chbR n=295 Tax=Escherichia RepID=E2QMU3_ECOLX
chbR; HTH-type transcriptional regulator chbR
ChbR transcriptional regulator ChbR transcriptional dual regulator {ECO:0000313|EMBL:EHU40636.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
69_002_scaffold_155_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17376..17726)
DNA (351bp) protein (117aa)
PTS system, lactose-specific IIa component; K02759 PTS system, cellobiose-specific IIA component [EC:2.7.1.69]
N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component n=1085 Tax=Enterobacteriaceae RepID=PTQA_ECO57
N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIAcomponent (PTS system N,N'-diacetylchitobiose-specificEIIA component) (EIIA-Chb) (EIII-Chb) {ECO:0000313|EMBL:EGI50655.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
69_002_scaffold_155_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17777..19135)
DNA (1359bp) protein (453aa)
PTS system, cellobiose-specific IIC component n=315 Tax=Escherichia RepID=A1ABR8_ECOK1
PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC; K02761 PTS system, cellobiose-specific IIC component
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
69_002_scaffold_155_20
Escherichia sp. KTE159, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19220..19540)
DNA (321bp) protein (107aa)
N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIB component n=1368 Tax=Enterobacteriaceae RepID=PTQB_ECO57
chbB; N,N'-diacetylchitobiose-specific enzyme IIB component of PTS
N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIB component {ECO:0000313|EMBL:EOW66276.1}; TaxID=1182732 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE159.;"
69_002_scaffold_155_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19839..20177)
DNA (339bp) protein (113aa)
Osmotically-inducible lipoprotein E n=381 Tax=Escherichia RepID=E2QMU7_ECOLX
DNA-binding transcriptional activator OsmE; K04064 osmotically inducible lipoprotein OsmE
Osmotically inducible lipoprotein OsmE {ECO:0000313|EMBL:BAI55140.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_155_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20379..21206
DNA (828bp) protein (276aa)
nadE; NAD synthetase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812}; EC=6.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00193, ECO:0000256|RuleBase:RU003812};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
NH(3)-dependent NAD(+) synthetase n=38 Tax=Escherichia coli RepID=D2NJ17_ECOS5
69_002_scaffold_155_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21436..22323
DNA (888bp) protein (296aa)
Excinuclease n=32 Tax=Escherichia coli RepID=D2NJ18_ECOS5
nucleotide excision repair endonuclease
Excinuclease {ECO:0000313|EMBL:BAI55142.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_002_scaffold_155_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22283..22858)
DNA (576bp) protein (192aa)
ydjR; acyl-CoA dehydrogenase (EC:1.3.99.-); K09975 hypothetical protein
Protein Ves n=296 Tax=Escherichia RepID=VES_ECO45
Protein Ves {ECO:0000256|HAMAP-Rule:MF_01591}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
Displaying 24 items

View Taxonomy