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69_002_scaffold_483

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_002_scaffold_483_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..153)
DNA (153bp) protein (51aa)
30S ribosomal protein S20 n=1 Tax=Escherichia coli HVH 4 (4-7276109) RepID=T5P0T5_ECOLX
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
69_002_scaffold_483_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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482..1423
DNA (942bp) protein (314aa)
ribF; riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
Riboflavin biosynthesis protein RibF n=886 Tax=Enterobacteriaceae RepID=RIBF_ECO57
69_002_scaffold_483_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1466..4282
DNA (2817bp) protein (939aa)
Isoleucine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02002}; EC=6.1.1.5 {ECO:0000255|HAMAP-Rule:MF_02002};; Isoleucyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02002}; Short=IleRS {ECO:0000255|HAMAP-Rule:MF_02002};; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
Isoleucine--tRNA ligase n=187 Tax=Escherichia coli RepID=SYI_ECO81
iles; Isoleucyl-tRNA synthetase
69_002_scaffold_483_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4282..4776
DNA (495bp) protein (165aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Lipoprotein signal peptidase n=37 Tax=Escherichia RepID=D2NAY0_ECOS5
prolipoprotein signal peptidase
69_002_scaffold_483_5
Escherichia sp. KTE11, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4884..5333
DNA (450bp) protein (150aa)
fkpB; FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03774 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1169331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE11.;"
FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase n=1341 Tax=Enterobacteriaceae RepID=FKBX_ECO57
69_002_scaffold_483_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5335..6285
DNA (951bp) protein (317aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1444053 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C1.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=972 Tax=Enterobacteriaceae RepID=ISPH_ECO24
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
69_002_scaffold_483_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6351..7265
DNA (915bp) protein (305aa)
Non-specific ribonucleoside hydrolase RihC {ECO:0000256|HAMAP-Rule:MF_01432}; EC=3.2.-.- {ECO:0000256|HAMAP-Rule:MF_01432};; Purine/pyrimidine ribonucleoside hydrolase {ECO:0000256|HAMAP-Rule:MF_01432}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Non-specific ribonucleoside hydrolase RihC n=35 Tax=Escherichia coli RepID=D2NAY3_ECOS5
ribonucleoside hydrolase
69_002_scaffold_483_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7288..7653
DNA (366bp) protein (122aa)
Uncharacterized protein n=85 Tax=Escherichia RepID=D2NAY4_ECOS5
hypothetical protein
Membrane protein {ECO:0000313|EMBL:AJO81950.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_002_scaffold_483_9
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7814..8635
DNA (822bp) protein (274aa)
dapB; dihydrodipicolinate reductase; K00215 dihydrodipicolinate reductase [EC:1.3.1.26]
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018068}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018030};; TaxID=623 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri.;"
4-hydroxy-tetrahydrodipicolinate reductase n=441 Tax=Enterobacteriaceae RepID=DAPB_ECO45
Displaying 9 items

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