ggKbase home page

69_007_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 212 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_007_scaffold_0_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


50..2677
DNA (2628bp) protein (876aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
DNA gyrase subunit A n=31 Tax=Escherichia coli RepID=D2NKH8_ECOS5
DNA gyrase subunit A
69_007_scaffold_0_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2826..4514
DNA (1689bp) protein (563aa)
Uncharacterized protein n=35 Tax=Escherichia coli RepID=D2NKH7_ECOS5
yfaA; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO84246.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_0_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4511..5134
DNA (624bp) protein (208aa)
Uncharacterized protein n=35 Tax=Escherichia coli RepID=D2NKH6_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO84245.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_0_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5278..9672
DNA (4395bp) protein (1465aa)
Uncharacterized protein n=15 Tax=Escherichia coli RepID=L2ZL35_ECOLX
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Putative membrane protein {ECO:0000313|EMBL:CDN82905.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
hypothetical protein; K06894
69_007_scaffold_0_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9673..11322
DNA (1650bp) protein (550aa)
Uncharacterized protein n=27 Tax=Escherichia coli RepID=L3KED3_ECOLX
Stage II sporulation family protein {ECO:0000313|EMBL:KEJ57658.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
yfaQ; hypothetical protein
69_007_scaffold_0_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11327..12103
DNA (777bp) protein (259aa)
Uncharacterized protein n=49 Tax=Escherichia coli RepID=D2NKH3_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI55647.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_007_scaffold_0_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12177..13361)
DNA (1185bp) protein (395aa)
atoB; Acetyl-CoA acetyltransferase (EC:2.3.1.9); K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
Acetyl-CoA acetyltransferase n=60 Tax=Escherichia coli RepID=D2NKH2_ECOS5
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:EGI15741.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
69_007_scaffold_0_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13392..14714)
DNA (1323bp) protein (441aa)
Short chain fatty acid transporter n=343 Tax=Escherichia RepID=A1AD76_ECOK1
short chain fatty acid transporter; K02106 short-chain fatty acids transporter
Short-chain fatty acids transporter {ECO:0000313|EMBL:ELJ70720.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
69_007_scaffold_0_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14711..15361)
DNA (651bp) protein (217aa)
atoA; acetyl-CoA:acetoacetyl-CoA transferase subunit beta (EC:2.8.3.8); K01035 acetate CoA-transferase beta subunit [EC:2.8.3.8]
Acetate CoA-transferase subunit beta n=376 Tax=Escherichia RepID=E2QP89_ECOLX
Acetate CoA-transferase subunit beta {ECO:0000313|EMBL:ELE54641.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
69_007_scaffold_0_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15361..16023)
DNA (663bp) protein (221aa)
atoD; acetoacetyl-CoA transferase subunit alpha (EC:2.8.3.8); K01034 acetate CoA-transferase alpha subunit [EC:2.8.3.8]
Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit n=302 Tax=Escherichia RepID=B7MXA3_ECO81
Acetate CoA-transferase, alpha subunit {ECO:0000313|EMBL:EGI50052.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
69_007_scaffold_0_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16219..17604)
DNA (1386bp) protein (462aa)
Two-component response regulator n=53 Tax=Escherichia RepID=D2NKG8_ECOS5
two-component response regulator
Acetoacetate metabolism regulatory protein AtoC (Ornithine/argininedecarboxylase inhibitor) (Ornithine decarboxylase antizyme) {ECO:0000313|EMBL:EGI15737.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
69_007_scaffold_0_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17601..19427)
DNA (1827bp) protein (609aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=868135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1C.;"
Signal transduction histidine-protein kinase atoS n=202 Tax=Escherichia RepID=E2QP86_ECOLX
two-component sensor kinase
69_007_scaffold_0_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19594..22443
DNA (2850bp) protein (950aa)
Sensor histidine kinase RcsC {ECO:0000256|HAMAP-Rule:MF_00979}; EC=2.7.13.3 {ECO:0000256|HAMAP-Rule:MF_00979};; TaxID=670897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2362-75.;"
rcsC; sensory protein; K07677 two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
Sensor kinase RcsC n=1 Tax=Escherichia coli KTE84 RepID=L4EVK2_ECOLX
69_007_scaffold_0_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22643..23293)
DNA (651bp) protein (217aa)
Transcriptional regulatory protein RcsB n=1388 Tax=Enterobacteriaceae RepID=RCSB_ECOLX
rcsB; Capsular synthesis regulator component B; K07687 two-component system, NarL family, captular synthesis response regulator RcsB
Transcriptional regulatory protein RcsB {ECO:0000256|HAMAP-Rule:MF_00981}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
69_007_scaffold_0_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23310..25982)
DNA (2673bp) protein (891aa)
Phosphotransferase RcsD {ECO:0000256|HAMAP-Rule:MF_00980}; EC=2.7.2.- {ECO:0000256|HAMAP-Rule:MF_00980};; Phosphotransfer intermediate RcsD {ECO:0000256|HAMAP-Rule:MF_00980}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
phosphotransfer intermediate protein in two-component regulatory system with RcsBC; K07676 two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
Sensor-like histidine kinase yojN n=262 Tax=Escherichia RepID=E2QP83_ECOLX
69_007_scaffold_0_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26721..27842
DNA (1122bp) protein (374aa)
Outer membrane protein C n=48 Tax=Escherichia RepID=C6K7L7_ECOLX
outer membrane porin protein C
Outer membrane porin OmpC {ECO:0000313|EMBL:BAI55637.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_007_scaffold_0_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27954..29009
DNA (1056bp) protein (352aa)
Uncharacterized protein n=37 Tax=Escherichia coli RepID=D2NKG2_ECOS5
yojL; Thiamin biosynthesis lipoprotein; K03734 thiamine biosynthesis lipoprotein
Thiamine biosynthesis protein ApbE {ECO:0000313|EMBL:AJO84230.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_0_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29083..30147
DNA (1065bp) protein (355aa)
ada; ADA regulatory protein (EC:2.1.1.63); K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
O6-methylguanine-DNA methyltransferase n=38 Tax=Escherichia coli RepID=D2NKG1_ECOS5
6-O-methylguanine DNA methyltransferase {ECO:0000313|EMBL:AJO84229.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_0_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30147..30797
DNA (651bp) protein (217aa)
AlkB repair system protein for alkylated DNA and RNA n=123 Tax=Escherichia RepID=A1AD65_ECOK1
DNA repair protein
Alkylated DNA repair protein AlkB {ECO:0000313|EMBL:KEJ57644.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_007_scaffold_0_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30873..32516
DNA (1644bp) protein (548aa)
ABC transporter ATP-binding protein yojI n=39 Tax=Escherichia coli RepID=E7JPC4_ECOLX
putative ABC transporter ATP-binding component
Putative ABC transporter ATP-binding component {ECO:0000313|EMBL:BAI55633.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_007_scaffold_0_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32734..34380
DNA (1647bp) protein (549aa)
Malate:quinone oxidoreductase n=36 Tax=Escherichia coli RepID=V8LD43_ECOLX
hypothetical protein
Malate:quinone oxidoreductase {ECO:0000313|EMBL:AJO84226.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_0_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34530..35018)
DNA (489bp) protein (163aa)
Ecotin n=695 Tax=Enterobacteriaceae RepID=ECOT_ECO24
eco; ecotin a serine protease inhibitor; K08276 ecotin
Ecotin {ECO:0000256|HAMAP-Rule:MF_00706, ECO:0000256|SAAS:SAAS00013245}; Flags: Precursor;; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
69_007_scaffold_0_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35153..35317)
DNA (165bp) protein (55aa)
Uncharacterized protein YojO n=410 Tax=Escherichia RepID=YOJO_ECOL5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU44335.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
69_007_scaffold_0_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35426..35920
DNA (495bp) protein (165aa)
Ferredoxin-type protein n=40 Tax=Escherichia coli RepID=D2NKF5_ECOS5
napF; Ferredoxin-type protein; K02572 ferredoxin-type protein NapF
Ferredoxin-type protein NapF (Periplasmic nitrate reductase) {ECO:0000313|EMBL:CDL50209.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
69_007_scaffold_0_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35910..36173
DNA (264bp) protein (88aa)
Protein napD n=392 Tax=Escherichia RepID=E2QP73_ECOLX
napD; assembly protein for periplasmic nitrate; K02570 periplasmic nitrate reductase NapD
Signal peptide-binding chaperone for NapA {ECO:0000313|EMBL:EHU42446.1}; TaxID=868140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2C.;"
69_007_scaffold_0_26
Escherichia fergusonii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36170..38656
DNA (2487bp) protein (829aa)
napA; nitrate reductase catalytic subunit; K02567 periplasmic nitrate reductase NapA [EC:1.7.99.4]
Nitrate reductase {ECO:0000256|HAMAP-Rule:MF_01630, ECO:0000256|SAAS:SAAS00064461}; EC=1.7.99.4 {ECO:0000256|HAMAP-Rule:MF_01630, ECO:0000256|SAAS:SAAS00064461};; Flags: Precursor;; TaxID=981367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia fergusonii ECD227.;"
Periplasmic nitrate reductase n=448 Tax=Enterobacteriaceae RepID=NAPA_ECOHS
69_007_scaffold_0_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38663..39358
DNA (696bp) protein (232aa)
Ferredoxin-type protein NapG n=1096 Tax=Enterobacteriaceae RepID=NAPG_ECOL6
napG; quinol dehydrogenase periplasmic component; K02573 ferredoxin-type protein NapG
Ferredoxin {ECO:0000313|EMBL:EQQ07859.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
69_007_scaffold_0_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39345..40208
DNA (864bp) protein (288aa)
Ferredoxin-type protein n=52 Tax=Escherichia coli RepID=D2NKF1_ECOS5
napH; Ferredoxin type protein; K02574 ferredoxin-type protein NapH
Ferredoxin-type protein napH {ECO:0000313|EMBL:EGE64131.1}; TaxID=754082 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_7v.;"
69_007_scaffold_0_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40205..40654
DNA (450bp) protein (150aa)
Periplasmic nitrate reductase, electron transfer subunit n=833 Tax=Enterobacteriaceae RepID=NAPB_ECOLI
napB; citrate reductase cytochrome c-type subunit; K02568 cytochrome c-type protein NapB
Periplasmic nitrate reductase, electron transfer subunit {ECO:0000256|PIRNR:PIRNR006105}; Diheme cytochrome c NapB {ECO:0000256|PIRNR:PIRNR006105}; TaxID=1169355 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE38.;"
69_007_scaffold_0_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40664..41266
DNA (603bp) protein (201aa)
Cytochrome c-type protein NapC n=1279 Tax=Enterobacteriaceae RepID=NAPC_ECO57
periplasmic nitrate (or nitrite) reductase c-type cytochrome; K02569 cytochrome c-type protein NapC
Cytochrome c-type protein {ECO:0000256|PIRNR:PIRNR000013}; TaxID=1444179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C3.;"
Displaying items 1-30 of 212 in total

View Taxonomy