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69_007_scaffold_16

Search features with annotation key words

Displaying items 1-30 of 135 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_007_scaffold_16_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..80)
DNA (78bp) protein (26aa)
ATP-dependent Clp protease adapter protein ClpS n=1383 Tax=Enterobacteriaceae RepID=CLPS_ECO24
ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=868134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1B.;"
69_007_scaffold_16_2
unknown

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comp(111..431)
DNA (321bp) protein (107aa)

This feature has no annotations

69_007_scaffold_16_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

754..978
DNA (225bp) protein (75aa)
Cold shock-like protein CspD n=1412 Tax=Enterobacteriaceae RepID=CSPD_ECO57
cspD; stationary phase/starvation inducible regulatory protein CspD; K03704 cold shock protein (beta-ribbon, CspA family)
Cold shock domain protein CspD {ECO:0000313|EMBL:KEJ61466.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_007_scaffold_16_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1051..2997)
DNA (1947bp) protein (649aa)
ybjZ; Putative ABC transporter ATP-binding component; K05685 macrolide transport system ATP-binding/permease protein [EC:3.6.3.-]
Macrolide export ATP-binding/permease protein MacB {ECO:0000256|HAMAP-Rule:MF_01720}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01720};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Macrolide export ATP-binding/permease MacB 1 n=36 Tax=Escherichia coli RepID=L2ZRG5_ECOLX
69_007_scaffold_16_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2994..4109)
DNA (1116bp) protein (372aa)
Macrolide-specific efflux protein macA n=190 Tax=Escherichia coli RepID=E2QJ87_ECOLX
macrolide transporter subunit MacA; K13888 macrolide-specific efflux protein MacA
Macrolide-specific efflux protein macA {ECO:0000313|EMBL:EOX01207.1}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
69_007_scaffold_16_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4224..5216
DNA (993bp) protein (331aa)
Uncharacterized protein n=339 Tax=Escherichia RepID=B7MHI3_ECO45
ybjX; hypothetical protein; K09824 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE06367.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
69_007_scaffold_16_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5213..6871)
DNA (1659bp) protein (553aa)
Conserved protein with nucleoside triphosphate hydrolase domain n=54 Tax=Escherichia coli RepID=B7UMW8_ECO27
ybjD; hypothetical protein
Conserved protein with nucleoside triphosphate hydrolase domain {ECO:0000313|EMBL:CAS08421.1}; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O127:H6 (strain E2348/69 / EPEC).;"
69_007_scaffold_16_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7296..7991
DNA (696bp) protein (232aa)
Aquaporin Z n=485 Tax=Escherichia RepID=AQPZ_ECO57
aqpZ; aquaporin Z; K06188 aquaporin Z
Aquaporin Z {ECO:0000256|HAMAP-Rule:MF_01146}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
69_007_scaffold_16_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8406..9305
DNA (900bp) protein (300aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NG70_ECOS5
membrane protein
Membrane protein {ECO:0000313|EMBL:AJO82740.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_16_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9449..11101
DNA (1653bp) protein (551aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Hydroxylamine reductase n=37 Tax=Escherichia RepID=D2NG69_ECOS5
hydroxylamine reductase
69_007_scaffold_16_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11113..12081
DNA (969bp) protein (323aa)
NADH oxidoreductase n=36 Tax=Escherichia coli RepID=D2NG68_ECOS5
oxidoreductase
HCP oxidoreductase {ECO:0000313|EMBL:AJO82738.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_16_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12214..13932
DNA (1719bp) protein (573aa)
poxB; pyruvate dehydrogenase (EC:1.2.2.2); K00156 pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
Pyruvate dehydrogenase (Pyruvate oxidase), thiamin-dependent, FAD-binding {ECO:0000313|EMBL:CAR02227.1}; EC=1.2.2.2 {ECO:0000313|EMBL:CAR02227.1};; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
Pyruvate dehydrogenase n=140 Tax=Escherichia RepID=A1A9A9_ECOK1
69_007_scaffold_16_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13969..14970
DNA (1002bp) protein (334aa)
Low specificity L-threonine aldolase {ECO:0000313|EMBL:KDW77172.1}; EC=4.1.2.5 {ECO:0000313|EMBL:KDW77172.1};; TaxID=1444053 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C1.;"
L-allo-threonine aldolase n=48 Tax=Escherichia coli RepID=D2NG66_ECOS5
L-allo-threonine aldolase
69_007_scaffold_16_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14981..16411
DNA (1431bp) protein (477aa)
Uncharacterized protein n=26 Tax=Escherichia coli RepID=D2NG65_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDL42688.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
69_007_scaffold_16_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16510..17523
DNA (1014bp) protein (338aa)
Uncharacterized protein ybjS n=425 Tax=Escherichia RepID=E2QIN4_ECOLX
ybjS; hypothetical protein
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:ESD86938.1}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
69_007_scaffold_16_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17520..18350)
DNA (831bp) protein (277aa)
amiD; N-acetylmuramoyl-L-alanine amidase; K11066 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramoyl-L-alanine amidase amiD n=262 Tax=Escherichia RepID=E2QIN3_ECOLX
N-acetylmuramoyl-L-alanine amidase AmiD {ECO:0000313|EMBL:EGI17014.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
69_007_scaffold_16_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18347..18670)
DNA (324bp) protein (108aa)
UPF0145 protein YbjQ n=1281 Tax=Enterobacteriaceae RepID=YBJQ_ECO24
ybjQ; hypothetical protein
UPF0145 protein YbjQ {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
69_007_scaffold_16_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18796..19311
DNA (516bp) protein (172aa)
Uncharacterized protein n=129 Tax=Escherichia RepID=B7MQW9_ECO81
ybjP; putative lipoprotein
Putative lipoprotein ybjP {ECO:0000313|EMBL:EHU12900.1}; TaxID=868133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1A.;"
69_007_scaffold_16_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19529..20257
DNA (729bp) protein (243aa)
artP; arginine transporter ATP-binding subunit; K10000 arginine transport system ATP-binding protein [EC:3.6.3.-]
Arginine transport system ATP-binding protein n=2 Tax=Escherichia coli RepID=E6P1P1_ECOD1
Arginine transport ATP-binding protein ArtP {ECO:0000313|EMBL:ESD22296.1}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
69_007_scaffold_16_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20275..21006
DNA (732bp) protein (244aa)
Arginine ABC transporter substrate binding component n=43 Tax=Escherichia RepID=D2NG59_ECOS5
artI; Arginine ABC binding periplasmic protein; K09997 arginine transport system substrate-binding protein
Lysine-arginine-ornithine-binding periplasmic family protein {ECO:0000313|EMBL:KEJ61447.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_007_scaffold_16_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21013..21729
DNA (717bp) protein (239aa)
Arginine ABC transporter permease protein ArtQ n=728 Tax=Enterobacteriaceae RepID=ARTQ_ECOL6
artQ; arginine ABC transporter permease; K09999 arginine transport system permease protein
Arginine transporter permease subunit ArtQ {ECO:0000313|EMBL:EYY74351.1}; TaxID=1446735 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:NM str. 2010C-4788.;"
69_007_scaffold_16_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21729..22397
DNA (669bp) protein (223aa)
Arginine ABC transporter permease protein ArtM n=1244 Tax=Enterobacteriaceae RepID=ARTM_ECO57
artM; arginine transporter permease subunit ArtM
Amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein {ECO:0000313|EMBL:EMU64106.1}; TaxID=1116132 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.7.;"
69_007_scaffold_16_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22623..23354
DNA (732bp) protein (244aa)
Arginine 3rd transport system periplasmic binding protein n=892 Tax=Enterobacteriaceae RepID=E2QIM6_ECOLX
arginine 3rd transport system periplasmic binding protein ArtJ
ABC transporter arginine-binding protein 1 {ECO:0000313|EMBL:EOV64150.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
69_007_scaffold_16_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23383..24510)
DNA (1128bp) protein (376aa)
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC {ECO:0000256|HAMAP-Rule:MF_01012, ECO:0000256|SAAS:SAAS00055322}; EC=2.1.1.189 {ECO:0000256|HAMAP-Rule:MF_01012, ECO:0000256|SAAS:SAAS00055340};; 23S rRNA(m5U747)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01012}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC n=46 Tax=Escherichia coli RepID=D2NG55_ECOS5
hypothetical protein
69_007_scaffold_16_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24551..25039)
DNA (489bp) protein (163aa)
Inner membrane protein YbjO n=1340 Tax=Enterobacteriaceae RepID=YBJO_ECO57
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KDV38793.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
69_007_scaffold_16_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25099..25944)
DNA (846bp) protein (282aa)
Putrescine transport system permease protein potI n=49 Tax=Escherichia coli RepID=E2QIM3_ECOLX
putrescine ABC transporter membrane protein; K11074 putrescine transport system permease protein
PotI protein; Putrescine transport system permease protein PotI {ECO:0000313|EMBL:CDN81223.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_007_scaffold_16_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25941..26885)
DNA (945bp) protein (315aa)
Putrescine ABC transporter permease component n=36 Tax=Escherichia coli RepID=D2NG52_ECOS5
putrescine ABC transporter permease component
Putrescine ABC transporter permease component {ECO:0000313|EMBL:BAI54321.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_007_scaffold_16_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26895..28028)
DNA (1134bp) protein (378aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=83334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:H7.;"
ATP-binding component of putrescine transport system n=497 Tax=Escherichia RepID=C3TH17_ECOLX
potG; putrescine ABC transporter ATP-binding protein; K11076 putrescine transport system ATP-binding protein
69_007_scaffold_16_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28123..29235)
DNA (1113bp) protein (371aa)
Putrescine-binding periplasmic protein n=27 Tax=Escherichia coli RepID=G0D2Z9_ECOLX
potF; Putrescine ABC transporter putrescine-binding protein; K11073 putrescine transport system substrate-binding protein
Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJO82721.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_16_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29585..30061)
DNA (477bp) protein (159aa)
Uncharacterized protein YbjN n=1388 Tax=Enterobacteriaceae RepID=YBJN_ECO57
ybjN; putative sensory transduction regulator
Bacterial sensory transduction regulator family protein {ECO:0000313|EMBL:KEJ50505.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
Displaying items 1-30 of 135 in total

View Taxonomy