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69_007_scaffold_70

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Displaying items 1-30 of 51 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_007_scaffold_70_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..115
DNA (114bp) protein (38aa)
30S ribosomal protein S21 n=6 Tax=Edwardsiella RepID=RS21_EDWI9
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
69_007_scaffold_70_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

226..1971
DNA (1746bp) protein (582aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
DNA primase n=57 Tax=Escherichia RepID=D2NMS6_ECOS5
DNA primase
69_007_scaffold_70_3
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2166..4007
DNA (1842bp) protein (614aa)
RNA polymerase sigma factor RpoD n=345 Tax=Escherichia RepID=A1AFY8_ECOK1
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor
69_007_scaffold_70_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4085..4591)
DNA (507bp) protein (169aa)
G/U mismatch-specific DNA glycosylase; K03649 TDG/mug DNA glycosylase family protein [EC:3.2.2.-]
G/U mismatch-specific DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_01956}; EC=3.2.2.28 {ECO:0000256|HAMAP-Rule:MF_01956};; Double-strand-specific uracil glycosylase {ECO:0000256|HAMAP-Rule:MF_01956}; Mismatch-specific uracil DNA-glycosylase {ECO:0000256|HAMAP-Rule:MF_01956}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
G/U mismatch-specific DNA glycosylase n=1012 Tax=Enterobacteriaceae RepID=MUG_ECO45
69_007_scaffold_70_trna_1
unknown

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4716..4788
DNA (73bp)
transferRNA Met
69_007_scaffold_70_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4845..5609)
DNA (765bp) protein (255aa)
ygjH1; hypothetical protein; K07229 ferric-chelate reductase (NADPH) [EC:1.16.1.9]
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NMS9_ECOS5
FMN reductase {ECO:0000313|EMBL:AJO85156.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_70_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5897..6520
DNA (624bp) protein (208aa)
Uncharacterized protein n=28 Tax=Escherichia coli RepID=D2NMT0_ECOS5
ygjI1; transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:BAI56454.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_007_scaffold_70_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6627..8147)
DNA (1521bp) protein (507aa)
Aerotaxis sensor receptor n=35 Tax=Escherichia coli RepID=D2NMT1_ECOS5
aerotaxis sensor receptor
Aerotaxis sensor receptor {ECO:0000313|EMBL:BAI56455.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_007_scaffold_70_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8655..9944
DNA (1290bp) protein (430aa)
ygjG; putrescine--2-oxoglutarate aminotransferase; K09251 putrescine aminotransferase [EC:2.6.1.82]
Putrescine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01276}; EC=2.6.1.82 {ECO:0000256|HAMAP-Rule:MF_01276};; Putrescine--2-oxoglutaric acid transaminase {ECO:0000256|HAMAP-Rule:MF_01276}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
Putrescine aminotransferase n=2 Tax=Escherichia coli RepID=L3E4A4_ECOLX
69_007_scaffold_70_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9986..10318)
DNA (333bp) protein (111aa)
T-RNA-binding domain protein n=719 Tax=Escherichia RepID=B1IRP3_ECOLC
ygjH2; hypothetical protein; K06878 tRNA-binding protein
tRNA-binding protein ygjH {ECO:0000313|EMBL:ELG86057.1}; TaxID=1182725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE146.;"
69_007_scaffold_70_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10537..11520
DNA (984bp) protein (328aa)
Ebg operon repressor n=147 Tax=Escherichia RepID=A1AFZ5_ECOK1
ebgR; DNA-binding transcriptional repressor EbgR; K12113 LacI family transcriptional regulator, ebg operon repressor
Ebg operon repressor {ECO:0000313|EMBL:CKH24771.1}; Transcriptional regulator {ECO:0000313|EMBL:AJO85160.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_70_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11704..14796
DNA (3093bp) protein (1031aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
Evolved beta-D-galactosidase alpha subunit n=34 Tax=Escherichia coli RepID=D2NMT5_ECOS5
ebgA; beta-D-galactosidase subunit alpha
69_007_scaffold_70_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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14793..15242
DNA (450bp) protein (150aa)
Evolved beta-galactosidase subunit beta n=1087 Tax=Enterobacteriaceae RepID=EBGC_ECOL6
ebgC; cryptic beta-D-galactosidase subunit beta; K12112 evolved beta-galactosidase subunit beta
Cryptic beta-D-galactosidase, beta subunit {ECO:0000313|EMBL:CAR09748.1}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
69_007_scaffold_70_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15305..16738
DNA (1434bp) protein (478aa)
Inner membrane transporter ygjI n=850 Tax=Enterobacteriaceae RepID=C3STU2_ECOLX
ygjI2; Putative transporter
Amino acid permease {ECO:0000313|EMBL:EIG80428.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
69_007_scaffold_70_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16872..17942
DNA (1071bp) protein (357aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NMT8_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO85164.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_70_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17959..20310
DNA (2352bp) protein (784aa)
Glycosyl hydrolase n=10 Tax=Escherichia coli RepID=L2ZFH8_ECOLX
ygjK; hypothetical protein; K03931 putative isomerase
Alpha-glucosidase {ECO:0000313|EMBL:AJO85165.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_70_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20536..22554
DNA (2019bp) protein (673aa)
2,4-dienoyl-CoA reductase-NADPH n=39 Tax=Escherichia coli RepID=G0D0I5_ECOLX
putative 2,4-dieonyl-CoA reductase
2,4-dienoyl-CoA reductase {ECO:0000313|EMBL:AJO85166.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_70_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22599..23015)
DNA (417bp) protein (139aa)
Uncharacterized protein n=40 Tax=Escherichia coli RepID=D2NMU1_ECOS5
hypothetical protein
Antitoxin HigA {ECO:0000313|EMBL:KEJ55194.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_007_scaffold_70_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23012..23326)
DNA (315bp) protein (105aa)
mRNA interferase HigB {ECO:0000313|EMBL:KDX46952.1}; EC=3.1.-.- {ECO:0000313|EMBL:KDX46952.1};; TaxID=1444151 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C2.;"
mRNA interferase HigB n=578 Tax=Enterobacteriaceae RepID=HIGB_ECO57
hypothetical protein
69_007_scaffold_70_19
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23611..24747)
DNA (1137bp) protein (379aa)
23S rRNA guanine-N-2-methyltransferase; K11391 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
Ribosomal RNA large subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_01859, ECO:0000256|SAAS:SAAS00036146}; EC=2.1.1.174 {ECO:0000256|HAMAP-Rule:MF_01859, ECO:0000256|SAAS:SAAS00036145};; 23S rRNA m2G1835 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01859}; rRNA (guanine-N(2)-)-methyltransferase RlmG {ECO:0000256|HAMAP-Rule:MF_01859}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia co
Ribosomal RNA large subunit methyltransferase G n=107 Tax=Escherichia RepID=B7N087_ECO81
69_007_scaffold_70_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24832..25335
DNA (504bp) protein (168aa)
Uncharacterized protein n=672 Tax=Enterobacteriaceae RepID=J7R604_ECOLX
ygjP; hypothetical protein; K07043
Metal-dependent hydrolase {ECO:0000313|EMBL:ESP07429.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
69_007_scaffold_70_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25412..26104
DNA (693bp) protein (231aa)
Uncharacterized protein n=41 Tax=Escherichia RepID=D2NMU5_ECOS5
ygjQ; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO85172.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_70_22
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26183..27169
DNA (987bp) protein (329aa)
Uncharacterized protein n=57 Tax=Escherichia RepID=D2NMU6_ECOS5
oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:CDC81685.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
69_007_scaffold_70_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27452..28417
DNA (966bp) protein (322aa)
Protein Alx n=72 Tax=Escherichia coli RepID=B1LFI6_ECOSM
alx; protein Alx
Inner membrane protein alx {ECO:0000313|EMBL:EOU69793.1}; TaxID=1169343 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE24.;"
69_007_scaffold_70_24
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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28741..29985
DNA (1245bp) protein (415aa)
Serine/threonine transporter SstT n=47 Tax=Escherichia RepID=D2NMU8_ECOS5
serine/threonine transporter
Serine/threonine transporter SstT {ECO:0000256|HAMAP-Rule:MF_01582, ECO:0000256|SAAS:SAAS00015301}; Na(+)/serine-threonine symporter {ECO:0000256|HAMAP-Rule:MF_01582}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
69_007_scaffold_70_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29989..30540)
DNA (552bp) protein (184aa)
Inner membrane protein ygjV n=380 Tax=Escherichia RepID=E2QED5_ECOLX
ygjV; Inner membrane protein ygjV
Inner membrane protein ygjV {ECO:0000313|EMBL:EOV03050.1}; TaxID=1169355 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE38.;"
69_007_scaffold_70_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30623..32110)
DNA (1488bp) protein (496aa)
uxaA; altronate hydrolase (EC:4.2.1.7); K01685 altronate hydrolase [EC:4.2.1.7]
Altronate hydrolase n=268 Tax=Escherichia RepID=B7N0N9_ECO81
Altronate hydrolase {ECO:0000313|EMBL:EHU26104.1}; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2A.;"
69_007_scaffold_70_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(32125..33537)
DNA (1413bp) protein (471aa)
uxaC; glucuronate isomerase (EC:5.3.1.12); K01812 glucuronate isomerase [EC:5.3.1.12]
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
Uronate isomerase n=776 Tax=cellular organisms RepID=UXAC_ECO24
69_007_scaffold_70_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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34020..35318
DNA (1299bp) protein (433aa)
Hexuronate transporter n=275 Tax=Enterobacteriaceae RepID=E2QED8_ECOLX
hexuronate transporter ExuT
Hexuronate transporter {ECO:0000313|EMBL:EOV62419.1}; TaxID=1182676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE69.;"
69_007_scaffold_70_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35448..36224
DNA (777bp) protein (259aa)
Negative regulator of Exu regulon, ExuT, UxaAC, and UxuB n=39 Tax=Escherichia RepID=A1AG11_ECOK1
exuR; DNA-binding transcriptional repressor ExuR
Exu regulon transcriptional regulator {ECO:0000313|EMBL:ETY41957.1}; TaxID=1328434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BWH 40.;"
Displaying items 1-30 of 51 in total

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