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69_007_scaffold_96

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Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_007_scaffold_96_1
Enterobacter sp. 35699, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..612
DNA (612bp) protein (204aa)
Hemolysin F n=5 Tax=Enterobacter RepID=K4YJQ6_9ENTR
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:KJN21126.1}; TaxID=1619248 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter.;" source="Enterobacter sp. 35699.;"
hemolysin F
69_007_scaffold_96_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(666..1964)
DNA (1299bp) protein (433aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11]
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1116132 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.7.;"
Enolase n=2 Tax=Shigella sonnei RepID=ENO_SHISS
69_007_scaffold_96_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2052..3689)
DNA (1638bp) protein (546aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2]
CTP synthase n=1284 Tax=Enterobacteriaceae RepID=PYRG_ECO24
69_007_scaffold_96_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3917..4282)
DNA (366bp) protein (122aa)
mazG; nucleoside triphosphate pyrophosphohydrolase; K04765 ATP diphosphatase [EC:3.6.1.8]
Nucleoside triphosphate pyrophosphohydrolase n=1 Tax=Escherichia coli 2731150 RepID=M9DMJ4_ECOLX
Protein MazG {ECO:0000313|EMBL:EGI19723.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
69_007_scaffold_96_5
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4296..4706)
DNA (411bp) protein (137aa)
mazG; MazG protein; K04765 ATP diphosphatase [EC:3.6.1.8]
Nucleoside triphosphate pyrophosphohydrolase n=4 Tax=Escherichia coli RepID=L3XXD3_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:CDC82610.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
69_007_scaffold_96_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4802..7036)
DNA (2235bp) protein (745aa)
relA; GTP pyrophosphokinase (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5]
GTP pyrophosphokinase n=1188 Tax=Bacteria RepID=RELA_ECO57
GTP pyrophosphokinase {ECO:0000313|EMBL:EOW01508.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
69_007_scaffold_96_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7084..8385)
DNA (1302bp) protein (434aa)
rumA; 23S rRNA 5-methyluridine methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=240 Tax=Escherichia coli RepID=RLMD_ECOL5
69_007_scaffold_96_8
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8442..11198
DNA (2757bp) protein (919aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
barA; BarA sensory histidine kinase; K07678 two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
Two-component sensor kinase n=51 Tax=Escherichia RepID=D2NLU3_ECOS5
69_007_scaffold_96_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11429..12769)
DNA (1341bp) protein (447aa)
ygcX; glucarate dehydratase (EC:4.2.1.40); K01706 glucarate dehydratase [EC:4.2.1.40]
Glucarate dehydratase n=36 Tax=Escherichia coli RepID=D2NLU4_ECOS5
Glucarate dehydratase {ECO:0000313|EMBL:CDN83389.1}; GudD protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_007_scaffold_96_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12790..14130)
DNA (1341bp) protein (447aa)
Glucarate dehydratase n=37 Tax=Escherichia coli RepID=G0DAI9_ECOLX
putative glucarate dehydratase
Putative glucarate dehydratase {ECO:0000313|EMBL:BAI56119.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_007_scaffold_96_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14132..15484)
DNA (1353bp) protein (451aa)
Glucarate transporter n=839 Tax=Enterobacteriaceae RepID=E2QQN5_ECOLX
gudP; putative D-glucarate transporter; K03535 MFS transporter, ACS family, glucarate transporter
D-galactonate transporter family protein {ECO:0000313|EMBL:EHU52544.1}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
69_007_scaffold_96_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15918..16367)
DNA (450bp) protein (150aa)
Uncharacterized protein n=42 Tax=Escherichia RepID=D2NLU7_ECOS5
yqcA; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI56121.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_007_scaffold_96_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16385..17167)
DNA (783bp) protein (261aa)
tRNA pseudouridine synthase C; K06175 tRNA pseudouridine65 synthase [EC:5.4.99.26]
Pseudouridine synthase n=194 Tax=Escherichia RepID=D2NLU8_ECOS5
tRNA pseudouridine synthase C {ECO:0000313|EMBL:AJO84768.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_96_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17167..17496)
DNA (330bp) protein (110aa)
Uncharacterized protein n=57 Tax=Escherichia RepID=D2NLU9_ECOS5
yqcC; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ56234.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_007_scaffold_96_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18118..18663)
DNA (546bp) protein (182aa)
Protein Syd n=34 Tax=Escherichia coli RepID=G0DAJ6_ECOLX
syd; Syd protein; K15723 SecY interacting protein Syd
SecY interacting protein Syd {ECO:0000313|EMBL:AJO84771.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_96_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18731..19579
DNA (849bp) protein (283aa)
hypothetical protein; K06879 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00037296}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00817, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00817}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00817}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00817}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NADPH-dependent 7-cyano-7-deazaguanine reductase n=27 Tax=Escherichia coli RepID=G0DAJ7_ECOLX
69_007_scaffold_96_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19691..21055
DNA (1365bp) protein (455aa)
LOG family protein YgdH n=1259 Tax=Enterobacteriaceae RepID=YGDH_ECO57
hypothetical protein; K06966
Putative nucleotide binding protein {ECO:0000313|EMBL:EGI44926.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
69_007_scaffold_96_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21612..22901
DNA (1290bp) protein (430aa)
Serine transporter n=398 Tax=Escherichia RepID=E2QQP2_ECOLX
sdaC; serine transporter family protein; K03837 serine transporter
Serine transporter {ECO:0000313|EMBL:CDL48225.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
69_007_scaffold_96_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22959..24326
DNA (1368bp) protein (456aa)
L-serine ammonia-lyase {ECO:0000313|EMBL:EMW17676.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EMW17676.1};; TaxID=1116125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2845650.;"
L-serine dehydratase 2 n=573 Tax=Enterobacteriaceae RepID=E2QQP3_ECOLX
sdaB; L-serine dehydratase 2
69_007_scaffold_96_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24348..25193
DNA (846bp) protein (282aa)
Flap endonuclease Xni {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS00008260}; Short=FEN {ECO:0000256|HAMAP-Rule:MF_01192};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01192, ECO:0000256|SAAS:SAAS00273675};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Flap endonuclease Xni n=243 Tax=Escherichia RepID=D5CZ75_ECOKI
xni; exonuclease IX; K01146 protein Xni
69_007_scaffold_96_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25298..26446)
DNA (1149bp) protein (383aa)
fucO; Lactaldehyde reductase (EC:1.1.1.77); K00048 lactaldehyde reductase [EC:1.1.1.77]
Lactaldehyde reductase n=30 Tax=Escherichia coli RepID=G0DAK3_ECOLX
FucO protein; Lactaldehyde reductase {ECO:0000313|EMBL:CDN83404.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_007_scaffold_96_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26474..27121)
DNA (648bp) protein (216aa)
fucA; L-fuculose phosphate aldolase (EC:4.1.2.17); K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17]
L-fuculose phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; EC=4.1.2.17 {ECO:0000256|HAMAP-Rule:MF_00987};; L-fuculose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00987}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
L-fuculose phosphate aldolase n=391 Tax=Escherichia RepID=FUCA_ECOL6
69_007_scaffold_96_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27668..28984
DNA (1317bp) protein (439aa)
L-fucose-proton symporter n=283 Tax=Escherichia RepID=E2QQP7_ECOLX
fucP; L-fucose transporter; K02429 MFS transporter, FHS family, L-fucose permease
L-fucose:H+ symporter permease {ECO:0000313|EMBL:ACB19059.1}; TaxID=439855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SMS-3-5 / SECEC).;"
69_007_scaffold_96_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29017..30792
DNA (1776bp) protein (592aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L-fucose isomerase n=178 Tax=Escherichia RepID=FUCI_ECO45
L-fucose isomerase
69_007_scaffold_96_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30901..32319
DNA (1419bp) protein (473aa)
L-fuculokinase {ECO:0000256|HAMAP-Rule:MF_00986, ECO:0000313|EMBL:CDN83408.1}; EC=2.7.1.51 {ECO:0000256|HAMAP-Rule:MF_00986};; L-fuculose kinase {ECO:0000256|HAMAP-Rule:MF_00986}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L-fuculokinase n=31 Tax=Escherichia coli RepID=G0DAK8_ECOLX
L-fuculokinase
69_007_scaffold_96_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32321..32743
DNA (423bp) protein (141aa)
RbsD or FucU transport; K02431 L-fucose mutarotase [EC:5.1.3.-]
L-fucose mutarotase {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00010479}; EC=5.1.3.29 {ECO:0000256|HAMAP-Rule:MF_01662, ECO:0000256|SAAS:SAAS00148242};; Fucose 1-epimerase {ECO:0000256|HAMAP-Rule:MF_01662}; Type-2 mutarotase {ECO:0000256|HAMAP-Rule:MF_01662}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
L-fucose mutarotase n=1387 Tax=Enterobacteriaceae RepID=FUCM_ECO24
69_007_scaffold_96_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32801..33532
DNA (732bp) protein (244aa)
L-fucose operon activator n=767 Tax=Enterobacteriaceae RepID=FUCR_ECOLI
fucR; DNA-binding transcriptional activator FucR; K02430 DeoR family transcriptional regulator, L-fucose operon activator
Transcriptional regulator {ECO:0000313|EMBL:EZD33730.1}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
69_007_scaffold_96_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33576..34676)
DNA (1101bp) protein (367aa)
rlmM; rRNA large subunit methyltransferase M; K06968 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
Ribosomal RNA large subunit methyltransferase M {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058276}; EC=2.1.1.186 {ECO:0000256|HAMAP-Rule:MF_01551, ECO:0000256|SAAS:SAAS00058274};; 23S rRNA (cytidine2498-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01551}; 23S rRNA 2'-O-ribose methyltransferase RlmM {ECO:0000256|HAMAP-Rule:MF_01551}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
Ribosomal RNA large subunit methyltransferase M n=818 Tax=Enterobacteriaceae RepID=RLMM_ECO24
69_007_scaffold_96_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34669..35064)
DNA (396bp) protein (132aa)
UPF0382 inner membrane protein YgdD n=1299 Tax=Enterobacteriaceae RepID=YGDD_ECO57
ygdD; hypothetical protein
Conserved predicted inner membrane protein {ECO:0000313|EMBL:CAS10622.1}; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O127:H6 (strain E2348/69 / EPEC).;"
69_007_scaffold_96_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35083..36000)
DNA (918bp) protein (306aa)
Glycine cleavage system transcriptional activator protein n=27 Tax=Escherichia coli RepID=G0DAL3_ECOLX
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AJO84786.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Displaying items 1-30 of 36 in total

View Taxonomy