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69_007_scaffold_105

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Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_007_scaffold_105_1
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..107)
DNA (105bp) protein (35aa)
Murein-lipoprotein (Fragment) n=1 Tax=Escherichia coli MS 198-1 RepID=D7XFN1_ECOLX
lpp; major outer membrane lipoprotein (murein-lipoprotein); K06078 murein lipoprotein
Repeated sequence found in lipoprotein LPP family protein {ECO:0000313|EMBL:EGK23348.1}; TaxID=766145 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri VA-6.;"
69_007_scaffold_105_2
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(418..1830)
DNA (1413bp) protein (471aa)
pykF; pyruvate kinase I; K00873 pyruvate kinase [EC:2.7.1.40]
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae CDC 74-1112.;"
Pyruvate kinase n=1 Tax=Escherichia coli ATCC BAA-2193 RepID=V4V0E6_ECOLX
69_007_scaffold_105_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2387..2596
DNA (210bp) protein (70aa)
Uncharacterized protein YdhZ n=1351 Tax=Enterobacteriaceae RepID=YDHZ_ECO57
ydhZ; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF56526.1}; TaxID=745156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1303.;"
69_007_scaffold_105_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3052..3678
DNA (627bp) protein (209aa)
4Fe-4S ferredoxin n=36 Tax=Escherichia coli RepID=L2ZMK7_ECOLX
putative iron-sulfur binding protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ58811.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_007_scaffold_105_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3699..5801
DNA (2103bp) protein (701aa)
Uncharacterized protein n=177 Tax=Escherichia coli RepID=Q8FH59_ECOL6
ydhV; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI55073.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_007_scaffold_105_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5814..6452
DNA (639bp) protein (213aa)
Uncharacterized protein n=40 Tax=Escherichia coli RepID=D2NIU8_ECOS5
ydhW; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDN82174.1}; YdhW protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_007_scaffold_105_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6516..7184
DNA (669bp) protein (223aa)
Ferredoxin n=36 Tax=Escherichia coli RepID=U5SGP6_ECOLX
putative oxidoreductase Fe-S subunit
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Putative oxidoreductase Fe-S subunit {ECO:0000313|EMBL:CDN82173.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_007_scaffold_105_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7181..7966
DNA (786bp) protein (262aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NIU6_ECOS5
ydhU; reductase; K08354 thiosulfate reductase cytochrome b subunit
Uncharacterized protein {ECO:0000313|EMBL:BAI55070.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_007_scaffold_105_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8018..8782
DNA (765bp) protein (255aa)
Uncharacterized protein n=37 Tax=Escherichia coli RepID=D2NIU5_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO83603.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_105_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8794..10398)
DNA (1605bp) protein (535aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NIU4_ECOS5
Uncharacterized protein {ECO:0000313|EMBL:KEJ58805.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
hypothetical protein
69_007_scaffold_105_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10524..10829)
DNA (306bp) protein (102aa)
Uncharacterized protein n=38 Tax=Escherichia coli RepID=D2NIU3_ECOS5
hypothetical protein
Protein ydhR {ECO:0000313|EMBL:CDL42243.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
69_007_scaffold_105_trna_2
unknown

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comp(10941..11014)
DNA (74bp)
transferRNA Val
69_007_scaffold_105_trna_1
unknown

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comp(11022..11095)
DNA (74bp)
transferRNA Val
69_007_scaffold_105_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11403..12659
DNA (1257bp) protein (419aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NIU2_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI55066.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_007_scaffold_105_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12700..14073)
DNA (1374bp) protein (458aa)
Multidrug resistance protein MdtK n=166 Tax=Escherichia coli RepID=MDTK_ECOLU
putative transport protein
Multidrug resistance protein MdtK {ECO:0000256|HAMAP-Rule:MF_00400, ECO:0000256|SAAS:SAAS00182200}; Multidrug-efflux transporter {ECO:0000256|HAMAP-Rule:MF_00400}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
69_007_scaffold_105_14
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14288..14929
DNA (642bp) protein (214aa)
ribC; riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9]
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EJZ66869.1}; EC=2.5.1.9 {ECO:0000313|EMBL:EJZ66869.1};; TaxID=766155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1485-80.;"
Riboflavin synthase n=999 Tax=Enterobacteriaceae RepID=RISA_ECOLI
69_007_scaffold_105_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14969..16117)
DNA (1149bp) protein (383aa)
cfa; cyclopropane-fatty-acyl-phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
Cyclopropane-fatty-acyl-phospholipid synthase n=689 Tax=Enterobacteriaceae RepID=CFA_ECOL6
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:ELE55638.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
69_007_scaffold_105_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16408..17619)
DNA (1212bp) protein (404aa)
Drug resistance transporter n=352 Tax=Escherichia RepID=E1PB78_ECOAB
ydhC; Putative inner membrane transport protein
Inner membrane transport protein ydhC {ECO:0000313|EMBL:KEJ58799.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_007_scaffold_105_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17732..18664
DNA (933bp) protein (311aa)
Transcriptional regulator n=47 Tax=Escherichia RepID=L2YE76_ECOLX
putative transcriptional regulator
Putative transcriptional regulator LYSR-type {ECO:0000313|EMBL:CDN82163.1}; YdhB protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_007_scaffold_105_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18661..19686)
DNA (1026bp) protein (342aa)
HTH-type transcriptional repressor PurR n=244 Tax=Escherichia RepID=PURR_ECO27
purR; DNA-binding transcriptional repressor PurR; K03604 LacI family transcriptional regulator, purine nucleotide synthesis repressor
HTH-type transcriptional repressor PurR {ECO:0000256|HAMAP-Rule:MF_01277, ECO:0000256|SAAS:SAAS00011512}; Pur regulon repressor {ECO:0000256|HAMAP-Rule:MF_01277}; Purine nucleotide synthesis repressor {ECO:0000256|HAMAP-Rule:MF_01277}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_007_scaffold_105_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19985..20074
DNA (90bp) protein (30aa)
Uncharacterized protein ynhF n=1 Tax=Shigella dysenteriae 1617 RepID=E2XG18_SHIDY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZJ41361.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
69_007_scaffold_105_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20240..21409
DNA (1170bp) protein (390aa)
Inner membrane transporter ydhP n=36 Tax=Escherichia coli RepID=L2ZKN2_ECOLX
Putative transport protein; K08156 MFS transporter, DHA1 family, arabinose polymer transporter
Putative transport protein {ECO:0000313|EMBL:BAI55059.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_007_scaffold_105_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21555..22136)
DNA (582bp) protein (194aa)
sodB; Superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase n=38 Tax=Escherichia coli RepID=D2NIT4_ECOS5
Superoxide dismutase {ECO:0000313|EMBL:AJO83591.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_105_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22264..23091)
DNA (828bp) protein (276aa)
Uncharacterized protein YdhO n=180 Tax=Escherichia RepID=E1PB72_ECOAB
ydhO; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZJ41358.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
69_007_scaffold_105_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23426..23773
DNA (348bp) protein (116aa)
Glutaredoxin-4 n=1432 Tax=Enterobacteriaceae RepID=GLRX4_ECO57
hypothetical protein; K07390 monothiol glutaredoxin
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1444053 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C1.;"
69_007_scaffold_105_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24145..24792)
DNA (648bp) protein (216aa)
rnt; ribonuclease T; K03683 ribonuclease T [EC:3.1.13.-]
Ribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051933}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00157};; Exoribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
Ribonuclease T n=90 Tax=Escherichia RepID=B7URZ3_ECO27
69_007_scaffold_105_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24895..25302)
DNA (408bp) protein (136aa)
gloA; glyoxalase I (EC:4.4.1.5); K01759 lactoylglutathione lyase [EC:4.4.1.5]
Lactoylglutathione lyase {ECO:0000256|RuleBase:RU361179}; EC=4.4.1.5 {ECO:0000256|RuleBase:RU361179, ECO:0000313|EMBL:CAR03012.1};; Glyoxalase I {ECO:0000256|RuleBase:RU361179}; TaxID=585035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:K1 (strain S88 / ExPEC).;"
Lactoylglutathione lyase (Fragment) n=1 Tax=Escherichia coli MS 57-2 RepID=E9UE54_ECOLX
69_007_scaffold_105_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25383..26480)
DNA (1098bp) protein (366aa)
N-ethylmaleimide reductase n=193 Tax=Enterobacteriaceae RepID=J7QRL9_ECOLX
nemA; N-ethylmaleimide reductase
Oxidoreductase, FAD/FMN-binding protein {ECO:0000313|EMBL:EFU37517.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
69_007_scaffold_105_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26517..27116)
DNA (600bp) protein (200aa)
HTH-type transcriptional repressor NemR n=838 Tax=Enterobacteriaceae RepID=NEMR_ECOL6
ydhM; transcriptional regulator YdhM
HTH-type transcriptional repressor nemR {ECO:0000313|EMBL:EQP55055.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
69_007_scaffold_105_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27219..27458
DNA (240bp) protein (80aa)
Uncharacterized protein n=26 Tax=Escherichia coli RepID=D2NIS7_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI55051.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
Displaying items 1-30 of 41 in total

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