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69_007_scaffold_121_5

Organism: 69_007_Escherichia_coli_50_69

partial RP 27 / 55 MC: 5 BSCG 30 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: comp(4120..4428)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1365 Tax=Enterobacteriaceae RepID=HFQ_ECO24 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 204
  • Evalue 4.60e-50
hfq; RNA-binding protein Hfq; K03666 host factor-I protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 204
  • Evalue 1.40e-50
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 102.0
  • Bit_score: 204
  • Evalue 6.40e-50

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCGTCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGACAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAGCACGCGATTTCTACTGTTGTCCCGTCTCGCCCGGTTTCTCATCACAGTAACAACGCCGGTGGCGGTACCAGCAGTAACTATCATCATGGTAGCAGCGCGCAGAATACTTCCGCGCAACAGGACAGCGAAGAAACCGAATAA
PROTEIN sequence
Length: 103
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVSHHSNNAGGGTSSNYHHGSSAQNTSAQQDSEETE*