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69_007_scaffold_121

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Displaying items 1-30 of 51 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_007_scaffold_121_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(133..330)
DNA (198bp) protein (66aa)
Uncharacterized protein YjeT n=1249 Tax=Enterobacteriaceae RepID=YJET_ECO57
yjeT; hypothetical protein; K09937 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDZ16526.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
69_007_scaffold_121_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(412..1416)
DNA (1005bp) protein (335aa)
Modulator of FtsH protease HflC n=1420 Tax=Bacteria RepID=HFLC_ECO57
hflC; Protein hflC
Modulator of FtsH protease HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
69_007_scaffold_121_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1419..2678)
DNA (1260bp) protein (420aa)
hflK; HflK protein regulator of FtsH protease; K04088 membrane protease subunit HflK [EC:3.4.-.-]
HflK protein n=262 Tax=Escherichia RepID=B1LQJ4_ECOSM
HflK protein {ECO:0000313|EMBL:KEJ53547.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_007_scaffold_121_4
Escherichia albertii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2764..4044)
DNA (1281bp) protein (427aa)
GTPase HflX n=371 Tax=Escherichia RepID=E2QKA7_ECOLX
hflX; GTP-binding protein HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=502347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia albertii (strain TW07627).;"
69_007_scaffold_121_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4120..4428)
DNA (309bp) protein (103aa)
RNA-binding protein Hfq n=1365 Tax=Enterobacteriaceae RepID=HFQ_ECO24
hfq; RNA-binding protein Hfq; K03666 host factor-I protein
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
69_007_scaffold_121_6
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4514..5464)
DNA (951bp) protein (317aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75]
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Esch
tRNA dimethylallyltransferase n=142 Tax=Escherichia RepID=MIAA_ECO45
69_007_scaffold_121_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5457..7304)
DNA (1848bp) protein (616aa)
DNA mismatch repair protein MutL n=38 Tax=Escherichia coli RepID=D2NFU6_ECOS5
mutL; DNA mismatch repair protein MutL; K03572 DNA mismatch repair protein MutL
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
69_007_scaffold_121_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7314..8645)
DNA (1332bp) protein (444aa)
N-acetylmuramoyl-l-alanine amidase n=36 Tax=Escherichia coli RepID=D2NFU5_ECOS5
N-acetylmuramoyl-L-alanine amidase
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; N-acetylmuramoyl-L-alanine amidase AmiB {ECO:0000313|EMBL:CDN85049.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_007_scaffold_121_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8664..9125)
DNA (462bp) protein (154aa)
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1100 Tax=Bacteria RepID=TSAE_ECO57
yjeE; hypothetical protein; K06925 UPF0079 ATP-binding protein
ADP-binding protein {ECO:0000313|EMBL:EZD90850.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
69_007_scaffold_121_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9097..10629)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NFU3_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEJ53540.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_007_scaffold_121_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10643..11782
DNA (1140bp) protein (380aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
Epoxyqueuosine reductase n=38 Tax=Escherichia coli RepID=D2NFU2_ECOS5
hypothetical protein
69_007_scaffold_121_trna_4
unknown

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comp(12055..12127)
DNA (73bp)
transferRNA Gly
69_007_scaffold_121_trna_3
unknown

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comp(12129..12198)
DNA (70bp)
transferRNA Pseudo
69_007_scaffold_121_trna_2
unknown

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comp(12240..12312)
DNA (73bp)
transferRNA Gly
69_007_scaffold_121_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12523..13068)
DNA (546bp) protein (182aa)
orn; oligoribonuclease Orn; K13288 oligoribonuclease [EC:3.1.-.-]
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C1.;"
Oligoribonuclease n=1042 Tax=cellular organisms RepID=ORN_ECO24
69_007_scaffold_121_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13163..14215
DNA (1053bp) protein (351aa)
yjeQ; Ribosome small subunit-stimulated GTPase EngC; K06949 ribosome biogenesis GTPase [EC:3.6.1.-]
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
Putative ribosome biogenesis GTPase RsgA n=429 Tax=Escherichia RepID=RSGA_ECO27
69_007_scaffold_121_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14312..15280
DNA (969bp) protein (323aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00093350};; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
Phosphatidylserine decarboxylase proenzyme n=60 Tax=Escherichia coli RepID=D2NFT9_ECOS5
69_007_scaffold_121_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15302..18625
DNA (3324bp) protein (1108aa)
Uncharacterized protein n=42 Tax=Escherichia RepID=D2NFT8_ECOS5
mechanosensitive channel protein
Mechanosensitive channel protein {ECO:0000313|EMBL:AJO86281.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_121_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18656..18958)
DNA (303bp) protein (101aa)
Uncharacterized protein n=66 Tax=Escherichia RepID=D2NFT7_ECOS5
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:BAI57587.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_007_scaffold_121_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19068..20525)
DNA (1458bp) protein (486aa)
Amino acid permease n=34 Tax=Escherichia coli RepID=V0A1Q2_ECOLX
yjeM; Putative amino acid permease
Transporter {ECO:0000313|EMBL:AJO86279.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_007_scaffold_121_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20789..21766)
DNA (978bp) protein (326aa)
poxA; lysyl-tRNA synthetase; K04568 lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Elongation factor P--(R)-beta-lysine ligase {ECO:0000256|HAMAP-Rule:MF_00174, ECO:0000256|SAAS:SAAS00088906}; Short=EF-P--(R)-beta-lysine ligase {ECO:0000256|HAMAP-Rule:MF_00174};; EC=6.3.1.- {ECO:0000256|HAMAP-Rule:MF_00174, ECO:0000256|SAAS:SAAS00088909};; EF-P post-translational modification enzyme A {ECO:0000256|HAMAP-Rule:MF_00174}; EF-P-lysine lysyltransferase {ECO:0000256|HAMAP-Rule:MF_00174}; TaxID=1169354 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
Elongation factor P--(R)-beta-lysine ligase n=14 Tax=Enterobacteriaceae RepID=C3SGA2_ECOLX
69_007_scaffold_121_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22091..23899
DNA (1809bp) protein (603aa)
frdA; fumarate reductase flavoprotein subunit (EC:1.3.99.1); K00244 fumarate reductase flavoprotein subunit [EC:1.3.99.1]
Fumarate reductase flavoprotein subunit {ECO:0000256|RuleBase:RU362050}; EC=1.3.5.4 {ECO:0000256|RuleBase:RU362050};; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
Fumarate reductase flavoprotein subunit n=370 Tax=Escherichia RepID=E2QK93_ECOLX
69_007_scaffold_121_20
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23892..24626
DNA (735bp) protein (245aa)
frdB; fumarate reductase iron-sulfur subunit (EC:1.3.99.1); K00245 fumarate reductase iron-sulfur subunit [EC:1.3.99.1]
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
Fumarate reductase iron-sulfur subunit n=3 Tax=Escherichia coli RepID=F4SSM2_ECOLX
69_007_scaffold_121_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24637..25032
DNA (396bp) protein (132aa)
Fumarate reductase subunit C n=1251 Tax=Bacteria RepID=FRDC_ECO24
fumarate reductase subunit C; K00246 fumarate reductase subunit C
Fumarate reductase subunit C {ECO:0000313|EMBL:AFH14034.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
69_007_scaffold_121_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25043..25402
DNA (360bp) protein (120aa)
frdD; fumarate reductase subunit D (EC:1.3.99.1); K00247 fumarate reductase subunit D
Fumarate reductase subunit D n=991 Tax=Bacteria RepID=FRDD_ECO27
Fumarate reductase subunit D {ECO:0000256|HAMAP-Rule:MF_00709, ECO:0000256|SAAS:SAAS00096033}; Fumarate reductase 13 kDa hydrophobic protein {ECO:0000256|HAMAP-Rule:MF_00709}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
69_007_scaffold_121_23

Not on your lists

25594..26598
DNA (1005bp) protein (335aa)
ampC; Beta-lactamase (EC:3.5.2.6)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=663166 species="Bacteria.;" source="mixed culture bacterium PE_gF1DD01_04.;"
Beta-lactamase n=2 Tax=Escherichia coli RepID=L2Y291_ECOLX
69_007_scaffold_121_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26687..27220
DNA (534bp) protein (178aa)
Outer membrane lipoprotein (Lipocalin) n=658 Tax=Enterobacteriaceae RepID=E2QK88_ECOLX
outer membrane lipoprotein Blc; K03098 outer membrane lipoprotein Blc
Outer membrane lipoprotein blc {ECO:0000313|EMBL:EZJ47603.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
69_007_scaffold_121_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27217..27534)
DNA (318bp) protein (106aa)
Quaternary ammonium compound-resistance protein SugE n=1064 Tax=Enterobacteriaceae RepID=SUGE_ECO57
sugE; quaternary ammonium compound-resistance protein SugE; K11741 quaternary ammonium compound-resistance protein SugE
Multidrug resistance protein, SMR family {ECO:0000313|EMBL:EID69166.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
69_007_scaffold_121_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27710..27856)
DNA (147bp) protein (49aa)
Entericidin B n=1424 Tax=Enterobacteriaceae RepID=ECNB_ECO57
entericidin B membrane lipoprotein
Entericidin B {ECO:0000313|EMBL:EII21457.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
69_007_scaffold_121_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28144..28710)
DNA (567bp) protein (189aa)
Elongation factor P n=1429 Tax=Enterobacteriaceae RepID=EFP_ECO24
translation elongation factor P; K02356 elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
Displaying items 1-30 of 51 in total

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