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69_008_scaffold_28

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Displaying items 1-30 of 160 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_008_scaffold_28_trna_1
unknown

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1..72
DNA (72bp)
transferRNA Lys
69_008_scaffold_28_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(186..1070)
DNA (885bp) protein (295aa)
HTH-type transcriptional regulator xapR n=221 Tax=Escherichia RepID=E2QPP0_ECOLX
xapR; HTH-type transcriptional regulator xapR
LysR substrate binding domain protein {ECO:0000313|EMBL:ESD33412.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
69_008_scaffold_28_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1322..2578)
DNA (1257bp) protein (419aa)
Xanthosine permease n=387 Tax=Escherichia RepID=E2QPP1_ECOLX
xapB; xanthosine transporter; K11537 MFS transporter, NHS family, xanthosine permease
Xanthosine transporter {ECO:0000313|EMBL:CAR09025.2}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
69_008_scaffold_28_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2639..3472)
DNA (834bp) protein (278aa)
xapA; Xanthosine phosphorylase (EC:2.4.2.1); K03815 xanthosine phosphorylase [EC:2.4.2.-]
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Purine nucleoside phosphorylase n=36 Tax=Escherichia coli RepID=D2NKY6_ECOS5
69_008_scaffold_28_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3721..4485
DNA (765bp) protein (255aa)
Uncharacterized protein yfen n=359 Tax=Escherichia RepID=E2QPP3_ECOLX
yfeN; hypothetical protein
Outer membrane protein {ECO:0000313|EMBL:ELJ70004.1}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
69_008_scaffold_28_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4524..5450)
DNA (927bp) protein (309aa)
Uncharacterized HTH-type transcriptional regulator YfeR n=529 Tax=Enterobacteriaceae RepID=YFER_ECOLI
LysR family transcriptional regulator
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:EMV57406.1}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
69_008_scaffold_28_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5540..6538
DNA (999bp) protein (333aa)
Sodium:bile acid symporter family protein n=735 Tax=Enterobacteriaceae RepID=B5YZV6_ECO5E
hypothetical protein
Sodium bile acid symporter family protein {ECO:0000313|EMBL:ESD73667.1}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908541.;"
69_008_scaffold_28_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6535..6753)
DNA (219bp) protein (73aa)
Uncharacterized protein n=84 Tax=Escherichia RepID=D2NKZ0_ECOS5
hypothetical protein; K09954 hypothetical protein
Putative cytoplasmic protein {ECO:0000313|EMBL:EGI15072.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
69_008_scaffold_28_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6755..8770)
DNA (2016bp) protein (672aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
ligA; NAD-dependent DNA ligase LigA (EC:6.5.1.2)
DNA ligase n=36 Tax=Escherichia coli RepID=D2NKZ1_ECOS5
69_008_scaffold_28_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8841..9770)
DNA (930bp) protein (310aa)
Cell division protein ZipA homolog n=4 Tax=Escherichia coli RepID=L3X9W6_ECOLX
Cell division protein ZipA homolog {ECO:0000256|HAMAP-Rule:MF_00509, ECO:0000256|SAAS:SAAS00054614}; TaxID=1444157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S3_C2.;"
zipA; cell division protein ZipA; K03528 cell division protein ZipA
69_008_scaffold_28_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9931..10692
DNA (762bp) protein (254aa)
Protein CysZ n=854 Tax=Enterobacteriaceae RepID=CYSZ_ECO27
cysZ; putative sulfate transport protein CysZ; K06203 CysZ protein
Sulfate transporter CysZ {ECO:0000256|HAMAP-Rule:MF_00468}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
69_008_scaffold_28_11
Escherichia sp. KTE114, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10877..11848
DNA (972bp) protein (324aa)
cysteine synthase A (EC:2.5.1.47); K01738 cysteine synthase A [EC:2.5.1.47]
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1169321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE114.;"
Cysteine synthase A n=1324 Tax=Enterobacteriaceae RepID=CYSK_ECO57
69_008_scaffold_28_12
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12232..12489
DNA (258bp) protein (86aa)
Phosphocarrier protein HPr n=2066 Tax=Enterobacteriaceae RepID=PTHP_ECO57
phosphotransferase system, phosphocarrier protein HPr; K02784 phosphocarrier protein HPr
Phosphocarrier protein ptsH {ECO:0000313|EMBL:ESG04270.1}; TaxID=1124962 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Poona str. ATCC BAA-1673.;"
69_008_scaffold_28_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12534..14261
DNA (1728bp) protein (576aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
Phosphoenolpyruvate-protein phosphotransferase n=35 Tax=Escherichia coli RepID=D2NKZ6_ECOS5
phosphoenolpyruvate-protein phosphotransferase
69_008_scaffold_28_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14275..14778
DNA (504bp) protein (168aa)
crr; PTS system glucose-specific transporter; K02777 PTS system, glucose-specific IIA component [EC:2.7.1.69]
Glucose-specific phosphotransferase enzyme IIA component n=1358 Tax=Enterobacteriaceae RepID=PTGA_ECOL6
Glucose-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:EOU89838.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
69_008_scaffold_28_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14821..15672)
DNA (852bp) protein (284aa)
pdxK; pyridoxal kinase (EC:2.7.1.35); K00868 pyridoxine kinase [EC:2.7.1.35]
Pyridoxine kinase {ECO:0000256|HAMAP-Rule:MF_01638}; EC=2.7.1.35 {ECO:0000256|HAMAP-Rule:MF_01638};; PN/PL/PM kinase {ECO:0000256|HAMAP-Rule:MF_01638}; Pyridoxal kinase {ECO:0000256|HAMAP-Rule:MF_01638}; Pyridoxamine kinase {ECO:0000256|HAMAP-Rule:MF_01638}; Vitamin B6 kinase {ECO:0000256|HAMAP-Rule:MF_01638}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
Pyridoxine kinase n=360 Tax=Escherichia RepID=PDXK_ECO45
69_008_scaffold_28_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15777..16145
DNA (369bp) protein (123aa)
Uncharacterized protein n=304 Tax=Escherichia RepID=B1LML4_ECOSM
yfeK; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV05586.1}; TaxID=1169355 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE38.;"
69_008_scaffold_28_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16148..17059)
DNA (912bp) protein (304aa)
cysM; cysteine synthase B (EC:2.5.1.47); K12339 cysteine synthase B [EC:2.5.1.47]
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Cysteine synthase B n=260 Tax=Escherichia coli RepID=E2QPQ6_ECOLX
69_008_scaffold_28_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17194..18291)
DNA (1098bp) protein (366aa)
cysA; sulfate/thiosulfate transporter subunit; K02045 sulfate transport system ATP-binding protein [EC:3.6.3.25]
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701};; Sulfate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01701}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Sulfate/thiosulfate import ATP-binding protein CysA n=271 Tax=Escherichia RepID=CYSA_ECOL6
69_008_scaffold_28_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18281..19156)
DNA (876bp) protein (292aa)
Sulfate transport system permease protein CysW n=857 Tax=Enterobacteriaceae RepID=CYSW_ECOL6
cysW; sulfate/thiosulfate transporter permease subunit; K02047 sulfate transport system permease protein
Sulfate transport system permease protein CysW {ECO:0000313|EMBL:EGP24276.1}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
69_008_scaffold_28_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19156..19989)
DNA (834bp) protein (278aa)
Sulfate transport system permease protein cysT n=259 Tax=Escherichia RepID=E2QPQ9_ECOLX
sulphate ABC transporter permease component
Sulfate transport system permease CysT {ECO:0000313|EMBL:ELE54473.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
69_008_scaffold_28_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19989..21005)
DNA (1017bp) protein (339aa)
Thiosulfate-binding protein n=248 Tax=Escherichia coli RepID=E2QPR0_ECOLX
cysP; thiosulfate transporter subunit; K02048 sulfate transport system substrate-binding protein
CysP {ECO:0000313|EMBL:EHU55065.1}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
69_008_scaffold_28_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21163..21954)
DNA (792bp) protein (264aa)
Oxidoreductase ucpA {ECO:0000313|EMBL:EMX31238.1}; EC=1.-.-.- {ECO:0000313|EMBL:EMX31238.1};; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
Oxidoreductase ucpA n=474 Tax=Enterobacteriaceae RepID=E2QPR1_ECOLX
ucpA; short chain dehydrogenase
69_008_scaffold_28_23
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22234..23130
DNA (897bp) protein (299aa)
yfeU; N-acetylmuramic acid 6-phosphate etherase; K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795};; N-acetylmuramic acid 6-phosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00068}; N-acetylmuramic acid 6-phosphate lyase {ECO:0000256|HAMAP-Rule:MF_00068}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; E
N-acetylmuramic acid 6-phosphate etherase n=50 Tax=Escherichia RepID=D2NL06_ECOS5
69_008_scaffold_28_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23134..24558
DNA (1425bp) protein (475aa)
PTS system, sucrose-specific IIBC component protein n=37 Tax=Escherichia coli RepID=G0D719_ECOLX
murP; PTS N-acetylmuramic acid transporter subunit IIBC
Putative PTS enzyme sucrose-specific IIBC components {ECO:0000313|EMBL:BAI55831.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_28_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24736..25635)
DNA (900bp) protein (300aa)
Uncharacterized protein n=4 Tax=Enterobacteriaceae RepID=Q31Y49_SHIBS
yfeX; hypothetical protein; K07223 putative iron-dependent peroxidase
Peroxidase {ECO:0000313|EMBL:KDV64282.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
69_008_scaffold_28_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25731..26306)
DNA (576bp) protein (192aa)
Uncharacterized protein n=57 Tax=Escherichia RepID=D2NL09_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP50723.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
69_008_scaffold_28_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26367..26816)
DNA (450bp) protein (150aa)
Inner membrane protein yfeZ n=396 Tax=Escherichia RepID=E2QPR6_ECOLX
hypothetical protein
Inner membrane protein yfeZ {ECO:0000313|EMBL:EOU65865.1}; TaxID=1169339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE20.;"
69_008_scaffold_28_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26803..27228)
DNA (426bp) protein (142aa)
Acetyltransferase YpeA {ECO:0000256|HAMAP-Rule:MF_01127}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01127};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Acetyltransferase YpeA n=36 Tax=Escherichia coli RepID=D2NL11_ECOS5
acetyltransferase
69_008_scaffold_28_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27442..28311
DNA (870bp) protein (290aa)
N-acetylmuramoyl-l-alanine amidase I; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
N-acetylmuramoyl-L-alanine amidase amiA n=198 Tax=Escherichia RepID=E2QPR8_ECOLX
N-acetylmuramoyl-l-alanine amidase I {ECO:0000313|EMBL:BAI55836.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
Displaying items 1-30 of 160 in total

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