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69_008_scaffold_48

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Displaying items 181-194 of 194 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_008_scaffold_48_180
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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161366..162508
DNA (1143bp) protein (381aa)
Integrase of prophageCP-933X(Intergra se) n=163 Tax=root RepID=E2QKM0_ECOLX
integrase of prophageCP-933X(Intergra se)
Phage integrase family protein {ECO:0000313|EMBL:KEJ49690.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
69_008_scaffold_48_181
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(162622..163872)
DNA (1251bp) protein (417aa)
icd; isocitrate dehydrogenase; K00031 isocitrate dehydrogenase [EC:1.1.1.42]
Isocitrate dehydrogenase [NADP] {ECO:0000256|RuleBase:RU004446}; EC=1.1.1.42 {ECO:0000256|RuleBase:RU004446};; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
Isocitrate dehydrogenase [NADP] n=839 Tax=Enterobacteriaceae RepID=Q93R41_ECOLX
69_008_scaffold_48_182
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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164044..164697
DNA (654bp) protein (218aa)
Pseudouridine synthase n=37 Tax=Escherichia coli RepID=D2NHF1_ECOS5
hypothetical protein
23S rRNA pseudouridylate synthase {ECO:0000313|EMBL:AJO83069.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_48_183
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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164707..165168
DNA (462bp) protein (154aa)
NUDIX family hydrolase; K12152 phosphatase NudJ [EC:3.6.1.-]
Phosphatase NudJ n=1073 Tax=Enterobacteriaceae RepID=NUDJ_ECO24
Phosphatase nudJ {ECO:0000313|EMBL:ELE56729.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
69_008_scaffold_48_184
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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165222..166328
DNA (1107bp) protein (369aa)
mnmA; tRNA(5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61); K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-]
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1444053 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C1.;"
tRNA-specific 2-thiouridylase MnmA n=178 Tax=Escherichia coli RepID=D2NHE9_ECOS5
69_008_scaffold_48_185
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

166364..167005
DNA (642bp) protein (214aa)
High frequency lysogenization protein HflD n=375 Tax=Escherichia RepID=HFLD_ECO27
hypothetical protein; K07153 high frequency lysogenization protein
High frequency lysogenization protein HflD {ECO:0000256|HAMAP-Rule:MF_00695}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
69_008_scaffold_48_186
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167009..168379
DNA (1371bp) protein (457aa)
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
Adenylosuccinate lyase n=39 Tax=Escherichia coli RepID=D2NHE7_ECOS5
69_008_scaffold_48_187
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

168548..169219
DNA (672bp) protein (224aa)
Transcriptional regulatory protein PhoP n=924 Tax=Enterobacteriaceae RepID=PHOP_ECOL6
DNA-binding transcriptional regulator PhoP
Transcriptional regulator {ECO:0000313|EMBL:EZE07750.1}; TaxID=1446753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O69:H11 str. 08-4661.;"
69_008_scaffold_48_188
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

169219..170679
DNA (1461bp) protein (487aa)
phoQ; sensor protein PhoQ; K07637 two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
Sensor protein PhoQ n=591 Tax=Enterobacteriaceae RepID=PHOQ_ECOLI
69_008_scaffold_48_189
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170755..171876
DNA (1122bp) protein (374aa)
Uncharacterized protein n=755 Tax=Enterobacteriaceae RepID=J7Q735_ECOLX
cupin 4 family protein
YcfD protein {ECO:0000313|EMBL:ELE61787.1}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
69_008_scaffold_48_190
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(171925..173151)
DNA (1227bp) protein (409aa)
pepT; peptidase T; K01258 tripeptide aminopeptidase [EC:3.4.11.4]
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; Tripeptide aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00550}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 69-1.;"
Peptidase T n=11 Tax=Enterobacteriaceae RepID=B1LI16_ECOSM
69_008_scaffold_48_191
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173401..174537
DNA (1137bp) protein (379aa)
potA; polyamine transporter subunit; K11072 spermidine/putrescine transport system ATP-binding protein [EC:3.6.3.31]
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
Spermidine/putrescine import ATP-binding protein PotA n=933 Tax=Enterobacteriaceae RepID=POTA_ECO57
69_008_scaffold_48_192
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174521..175384
DNA (864bp) protein (288aa)
Polyamine transporter subunit membrane component of ABC superfamily n=138 Tax=Enterobacteriaceae RepID=B7N3N4_ECOLU
potB; spermidine/putrescine ABC transporter permease
Spermidine/putrescine ABC transporter, permease protein PotB {ECO:0000313|EMBL:ESA80178.1}; TaxID=1268975 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 110957.;"
69_008_scaffold_48_193
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175616..175882)
DNA (267bp) protein (89aa)
Uncharacterized protein n=109 Tax=Escherichia coli RepID=A7ZKR4_ECO24
tail fiber assembly protein
Tail fiber assembly protein {ECO:0000313|EMBL:ELE61783.1}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
Displaying items 181-194 of 194 in total

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