ggKbase home page

69_008_scaffold_48

Search features with annotation key words

Displaying items 1-30 of 194 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_008_scaffold_48_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(534..1151)
DNA (618bp) protein (206aa)
thymidine kinase (EC:2.7.1.21); K00857 thymidine kinase [EC:2.7.1.21]
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Thymidine kinase n=26 Tax=Escherichia coli RepID=G0D9B7_ECOLX
69_008_scaffold_48_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1755..2168
DNA (414bp) protein (138aa)
DNA-binding protein H-NS n=1374 Tax=Enterobacteriaceae RepID=HNS_ECO57
hns; global DNA-binding transcriptional dual regulator H-NS; K03746 DNA-binding protein H-NS
DNA-binding protein {ECO:0000256|PIRNR:PIRNR002096}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
69_008_scaffold_48_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2313..3221)
DNA (909bp) protein (303aa)
galU; UTP-glucose-1-phosphate uridylyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
UTP--glucose-1-phosphate uridylyltransferase n=1305 Tax=Enterobacteriaceae RepID=GALU_ECO57
69_008_scaffold_48_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3423..4436)
DNA (1014bp) protein (338aa)
Regulator of RpoS n=249 Tax=Escherichia RepID=E2QLJ4_ECOLX
rssB; response regulator of RpoS; K02485 two-component system, unclassified family, response regulator
Regulator of RpoS {ECO:0000256|HAMAP-Rule:MF_00958}; TaxID=574521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O127:H6 (strain E2348/69 / EPEC).;"
69_008_scaffold_48_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4528..5472)
DNA (945bp) protein (315aa)
UPF0028 protein ychK n=946 Tax=Enterobacteriaceae RepID=C3TCP7_ECOLX
rssA; hypothetical protein; K07001 NTE family protein
NTE family protein rssA {ECO:0000313|EMBL:EOV99224.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
69_008_scaffold_48_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5546..6004
DNA (459bp) protein (153aa)
UPF0225 protein ychJ n=47 Tax=Escherichia RepID=D2NHY0_ECOS5
hypothetical protein
UPF0225 protein YchJ {ECO:0000256|HAMAP-Rule:MF_00612}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_48_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6054..6896
DNA (843bp) protein (281aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
Formyltetrahydrofolate deformylase n=37 Tax=Escherichia coli RepID=D2NHX9_ECOS5
formyltetrahydrofolate deformylase
69_008_scaffold_48_trna_1
unknown

Not on your lists

7056..7143
DNA (88bp)
transferRNA Tyr
69_008_scaffold_48_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7233..8324)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=38 Tax=Escherichia coli RepID=D2NHX8_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI54752.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_48_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8311..9435)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=37 Tax=Escherichia coli RepID=D2NHX7_ECOS5
hypothetical protein
Fatty acid hydroxylase superfamily protein {ECO:0000313|EMBL:KEJ60482.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_008_scaffold_48_10
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9428..10030)
DNA (603bp) protein (201aa)
Uncharacterized protein n=53 Tax=Escherichia RepID=D2NHX6_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC77127.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
69_008_scaffold_48_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10027..11313)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=52 Tax=Escherichia RepID=D2NHX5_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI54749.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_48_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11310..12116)
DNA (807bp) protein (269aa)
GumP homolog n=160 Tax=Escherichia coli RepID=E2QLI5_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI54748.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_48_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12094..13110)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=38 Tax=Escherichia coli RepID=D2NHX3_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI54747.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_48_14
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13107..14114)
DNA (1008bp) protein (336aa)
hypothetical protein; K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
3-oxoacyl-[acyl-carrier-protein] synthase III n=46 Tax=Escherichia RepID=L2XEY3_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:CDC77123.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
69_008_scaffold_48_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14258..14935)
DNA (678bp) protein (226aa)
narI; nitrate reductase 1, gamma subunit; K00374 nitrate reductase 1, gamma subunit [EC:1.7.99.4]
Respiratory nitrate reductase, gamma subunit {ECO:0000313|EMBL:EMV62537.1}; EC=1.7.99.4 {ECO:0000313|EMBL:EMV62537.1};; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
Nitrate reductase 1 gamma subunit n=1357 Tax=Enterobacteriaceae RepID=C3TCR2_ECOLX
69_008_scaffold_48_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14935..15645)
DNA (711bp) protein (237aa)
Nitrate reductase molybdenum cofactor assembly chaperone NarJ n=469 Tax=Bacteria RepID=NARJ_ECO57
narJ; Respiratory nitrate reductase 1 delta chain; K00373 nitrate reductase 1, delta subunit
Nitrate reductase molybdenum cofactor assembly chaperone {ECO:0000313|EMBL:EFI86971.1}; TaxID=749548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 196-1.;"
69_008_scaffold_48_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15642..17180)
DNA (1539bp) protein (513aa)
narH; respiratory nitrate reductase 1 subunit beta (EC:1.7.99.4); K00371 nitrate reductase 1, beta subunit [EC:1.7.99.4]
Respiratory nitrate reductase 1 beta chain n=371 Tax=Escherichia RepID=E2QLI0_ECOLX
Nitrate reductase 1 beta subunit {ECO:0000313|EMBL:BAI54743.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_48_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17177..20920)
DNA (3744bp) protein (1248aa)
Nitrate reductase {ECO:0000313|EMBL:AJO83229.1}; Respiratory nitrate reductase 1 subunit alpha {ECO:0000313|EMBL:CKI07221.1}; EC=1.7.99.4 {ECO:0000313|EMBL:CKI07221.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Respiratory nitrate reductase 1 alpha chain n=311 Tax=Escherichia RepID=E2QLH9_ECOLX
nitrate reductase 1 alpha subunit
69_008_scaffold_48_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21313..22704)
DNA (1392bp) protein (464aa)
Nitrate/nitrite transporter NarK n=940 Tax=Enterobacteriaceae RepID=NARK_ECOLI
narK; nitrite extrusion protein 1; K02575 MFS transporter, NNP family, nitrate/nitrite transporter
Nitrite extrusion protein {ECO:0000313|EMBL:EGI46993.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
69_008_scaffold_48_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22799..23017)
DNA (219bp) protein (73aa)
Uncharacterized protein n=182 Tax=Escherichia coli RepID=D2NHW6_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO83227.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_48_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23043..24839
DNA (1797bp) protein (599aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
narX; Nitrate/nitrite sensor protein; K07673 two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
Nitrate/nitrite two-component sensor kinase n=41 Tax=Escherichia coli RepID=D2NHW5_ECOS5
69_008_scaffold_48_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24832..25482
DNA (651bp) protein (217aa)
Nitrate/nitrite response regulator protein NarL n=5 Tax=Bacteria RepID=F4NGZ3_9ENTR
narL; transcriptional regulator NarL; K07684 two-component system, NarL family, nitrate/nitrite response regulator NarL
Fused DNA-binding response regulator NarL {ECO:0000313|EMBL:EKJ82355.1}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
69_008_scaffold_48_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25483..26877)
DNA (1395bp) protein (465aa)
Invasin n=1 Tax=Escherichia coli KTE165 RepID=L4KKY2_ECOLX
ychP; hypothetical protein
Invasin {ECO:0000313|EMBL:CDL44897.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
69_008_scaffold_48_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27062..27415
DNA (354bp) protein (118aa)
Protein ychN n=440 Tax=Escherichia RepID=E2QLH4_ECOLX
hypothetical protein; K06039 uncharacterized protein involved in oxidation of intracellular sulfur
Putative ACR protein {ECO:0000313|EMBL:CDL44898.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
69_008_scaffold_48_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27459..28175)
DNA (717bp) protein (239aa)
ChaC protein n=228 Tax=Enterobacteriaceae RepID=A7ZKZ4_ECO24
chaC; regulatory protein for cation transport; K07232 cation transport protein ChaC
Cation transporter ChaC {ECO:0000313|EMBL:EHP63891.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
69_008_scaffold_48_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28303..28542)
DNA (240bp) protein (80aa)
Cation transport regulator n=48 Tax=Escherichia coli RepID=D2NHW0_ECOS5
chaB; Cation transport regulator; K06197 cation transport regulator
Cation transport regulator {ECO:0000313|EMBL:AJO83221.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_48_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28812..29912
DNA (1101bp) protein (367aa)
Calcium/proton antiporter n=303 Tax=Escherichia coli RepID=E2QLH1_ECOLX
chaA; calcium/proton antiporter; K07300 Ca2+:H+ antiporter
Calcium/proton antiporter {ECO:0000313|EMBL:ELG90252.1}; TaxID=1182725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE146.;"
69_008_scaffold_48_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30317..30424
DNA (108bp) protein (36aa)
Uncharacterized protein n=35 Tax=Escherichia coli RepID=D2NHV8_ECOS5
hypothetical protein
Toxin Ldr, type I toxin-antitoxin system family protein {ECO:0000313|EMBL:AJO83219.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_48_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30573..31427)
DNA (855bp) protein (285aa)
kdsA; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.55); K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
2-dehydro-3-deoxyphosphooctonate aldolase n=1146 Tax=Enterobacteriaceae RepID=KDSA_ECO24
Displaying items 1-30 of 194 in total

View Taxonomy