ggKbase home page

69_008_scaffold_61

Search features with annotation key words

Displaying items 1-30 of 58 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_008_scaffold_61_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29..1921
DNA (1893bp) protein (631aa)
pyruvate dehydrogenase (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Pyruvate dehydrogenase n=36 Tax=Escherichia coli RepID=D2NBS6_ECOS5
69_008_scaffold_61_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2129..3553
DNA (1425bp) protein (475aa)
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;"
Dihydrolipoyl dehydrogenase n=92 Tax=Enterobacteriaceae RepID=D2AHZ7_SHIF2
69_008_scaffold_61_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3624..5387)
DNA (1764bp) protein (588aa)
Uncharacterized protein n=35 Tax=Escherichia coli RepID=D2NBS8_ECOS5
yacH; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO82051.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_61_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5742..8339
DNA (2598bp) protein (866aa)
acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (EC:4.2.1.3 4.2.1.99); K01682 aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRNR036687}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Aconitate hydratase 2 n=314 Tax=Escherichia RepID=E2QF48_ECOLX
69_008_scaffold_61_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8514..8876
DNA (363bp) protein (121aa)
UPF0231 protein YacL n=1154 Tax=Enterobacteriaceae RepID=YACL_ECO24
hypothetical protein; K09910 hypothetical protein
UPF0231 protein YacL {ECO:0000256|HAMAP-Rule:MF_01053}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
69_008_scaffold_61_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8914..9708)
DNA (795bp) protein (265aa)
speD; S-adenosylmethionine decarboxylase (EC:4.1.1.50); K01611 S-adenosylmethionine decarboxylase [EC:4.1.1.50]
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00465};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00093036};; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2A.;"
S-adenosylmethionine decarboxylase proenzyme n=76 Tax=Escherichia coli RepID=SPED_ECO27
69_008_scaffold_61_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9724..10590)
DNA (867bp) protein (289aa)
Spermidine synthase n=609 Tax=Escherichia RepID=SPEE_ECO57
speE; Spermidine synthase
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=1181739 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE193.;"
69_008_scaffold_61_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10696..11043)
DNA (348bp) protein (116aa)
YacC protein n=14 Tax=Escherichia coli RepID=D6I515_ECOLX
yacC; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZE32108.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
69_008_scaffold_61_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11209..12759
DNA (1551bp) protein (517aa)
Blue copper oxidase CueO n=30 Tax=Escherichia RepID=G0D979_ECOLX
yacK; Blue copper oxidase CueO precursor; K14588 blue copper oxidase
Blue copper oxidase CueO {ECO:0000313|EMBL:KEJ62947.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_008_scaffold_61_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12806..15196)
DNA (2391bp) protein (797aa)
glucose dehydrogenase (EC:1.1.5.2); K00117 quinoprotein glucose dehydrogenase [EC:1.1.5.2]
Glucose dehydrogenase, PQQ-dependent {ECO:0000313|EMBL:CDL46737.1}; EC=1.1.5.2 {ECO:0000313|EMBL:CDL46737.1};; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
Glucose dehydrogenase n=26 Tax=Escherichia coli RepID=G0D980_ECOLX
69_008_scaffold_61_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15390..15938
DNA (549bp) protein (183aa)
hpt; hypoxanthine-guanine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
Hypoxanthine-guanine phosphoribosyltransferase n=5 Tax=Escherichia RepID=A1A7H1_ECOK1
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:BAI53678.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_61_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15979..16641)
DNA (663bp) protein (221aa)
carbonic anhydrase YadF; K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
Carbonic anhydrase 2 n=884 Tax=Enterobacteriaceae RepID=CAN_ECOLI
69_008_scaffold_61_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16750..17676
DNA (927bp) protein (309aa)
Uncharacterized ABC transporter ATP-binding protein n=383 Tax=Escherichia RepID=E2QF57_ECOLX
yadG; ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein
YadG {ECO:0000313|EMBL:EHU15478.1}; TaxID=868133 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1A.;"
69_008_scaffold_61_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17673..18443
DNA (771bp) protein (257aa)
Inner membrane transport permease YadH n=1360 Tax=Enterobacteriaceae RepID=YADH_ECO57
yadH; hypothetical protein; K09686 antibiotic transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
69_008_scaffold_61_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18548..18988
DNA (441bp) protein (147aa)
yadI; Putative PTS system IIA component (EC:2.7.1.69); K02821 PTS system, ascorbate-specific IIA component [EC:2.7.1.69]
PTS system IIA component domain protein n=79 Tax=Escherichia RepID=B3HU69_ECOLX
Putative PTS system IIB component {ECO:0000313|EMBL:BAI53682.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_61_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19052..20281
DNA (1230bp) protein (410aa)
Polysaccharide deacetylase lipoprotein n=27 Tax=Escherichia coli RepID=L2ZTG3_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO82064.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_61_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20285..20665)
DNA (381bp) protein (127aa)
panD; aspartate 1-decarboxylase; K01579 aspartate 1-decarboxylase [EC:4.1.1.11]
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
Aspartate 1-decarboxylase n=1325 Tax=Enterobacteriaceae RepID=PAND_ECO24
69_008_scaffold_61_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20939..21859
DNA (921bp) protein (307aa)
Transposase n=28 Tax=Escherichia coli RepID=L2ZTE2_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO82066.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_61_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21928..22125
DNA (198bp) protein (66aa)
Uncharacterized protein n=25 Tax=Escherichia coli RepID=L2ZUE7_ECOLX
hypothetical protein
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Uncharacterized protein {ECO:0000313|EMBL:CDN80516.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_008_scaffold_61_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22207..23058)
DNA (852bp) protein (284aa)
pantothenate synthetase (EC:6.3.2.1); K01918 pantoate--beta-alanine ligase [EC:6.3.2.1]
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247610}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
Pantothenate synthetase n=35 Tax=Escherichia coli RepID=D2NBU4_ECOS5
69_008_scaffold_61_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23070..23864)
DNA (795bp) protein (265aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=45 Tax=Escherichia RepID=D2NBU5_ECOS5
3-methyl-2-oxobutanoate hydroxymethyltransferase
69_008_scaffold_61_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23977..25230)
DNA (1254bp) protein (418aa)
Fimbrial-like adhesin protein n=31 Tax=Escherichia coli RepID=L2XLM3_ECOLX
Fimbrial protein {ECO:0000313|EMBL:AJO82070.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
putative fimbrial protein
69_008_scaffold_61_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25282..25878)
DNA (597bp) protein (199aa)
Protein YadK n=34 Tax=Escherichia coli RepID=F4STV7_ECOLX
fimbrial protein
Fimbrial protein StaF {ECO:0000313|EMBL:AJO82071.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_61_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25905..26507)
DNA (603bp) protein (201aa)
Fimbrial protein YadL n=43 Tax=Escherichia coli RepID=F5M8R7_ECOLX
putative fimbrial protein
Putative fimbrial protein {ECO:0000313|EMBL:BAI53690.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_61_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26522..27094)
DNA (573bp) protein (191aa)
Uncharacterized protein n=44 Tax=Escherichia coli RepID=U9ZMA6_ECOLX
fimbrial protein StaD
Yad-type fimbriae adhesin protein {ECO:0000313|EMBL:CDN80522.1}; YadM protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_008_scaffold_61_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27111..29711)
DNA (2601bp) protein (867aa)
Outer membrane usher protein htrE n=33 Tax=Escherichia coli RepID=L2XLS0_ECOLX
Fimbrial assembly protein {ECO:0000313|EMBL:AJO82074.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
htrE; Putative outer membrane usher protein
69_008_scaffold_61_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29746..30486)
DNA (741bp) protein (247aa)
Chaperone ecpD n=41 Tax=Escherichia coli RepID=L2XJJ2_ECOLX
putative pilin chaperone
EcpD protein; Yad-type fimbriae periplasmic chaperone protein {ECO:0000313|EMBL:CDN80524.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_008_scaffold_61_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30583..31167)
DNA (585bp) protein (195aa)
Fimbrial protein n=45 Tax=Escherichia coli RepID=U9ZIP3_ECOLX
putative fimbrial-like protein
Putative fimbrial subunit YadN {ECO:0000313|EMBL:EGI18152.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
69_008_scaffold_61_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31515..31994)
DNA (480bp) protein (160aa)
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:AJO82077.1}; EC=2.7.6.3 {ECO:0000313|EMBL:AJO82077.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase n=45 Tax=Escherichia coli RepID=D2NBV3_ECOS5
69_008_scaffold_61_30
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31991..33355)
DNA (1365bp) protein (455aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=42897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 2a.;"
Poly(A) polymerase I n=53 Tax=Enterobacteriaceae RepID=D2NBV4_ECOS5
poly(A) polymerase
Displaying items 1-30 of 58 in total

View Taxonomy