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69_008_scaffold_67

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Displaying items 1-30 of 88 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_008_scaffold_67_trna_1
unknown

Not on your lists

comp(6..95)
DNA (90bp)
transferRNA Ser
69_008_scaffold_67_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(411..596)
DNA (186bp) protein (62aa)
Carbon storage regulator homolog n=2139 Tax=Bacteria RepID=CSRA_CITK8
carbon storage regulator CsrA; K03563 carbon storage regulator
Carbon storage regulator {ECO:0000256|HAMAP-Rule:MF_00167}; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 119-7.;"
69_008_scaffold_67_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(774..3404)
DNA (2631bp) protein (877aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
Alanine--tRNA ligase n=37 Tax=Escherichia coli RepID=D2NLK6_ECOS5
69_008_scaffold_67_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3533..4033)
DNA (501bp) protein (167aa)
Regulatory protein RecX n=36 Tax=Escherichia coli RepID=D2NLK7_ECOS5
oraA; RecX regulatory protein; K03565 regulatory protein
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_67_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4102..5163)
DNA (1062bp) protein (354aa)
Protein RecA n=1481 Tax=Proteobacteria RepID=RECA_ECO24
recA; DNA strand exchange and recombination protein; K03553 recombination protein RecA
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C3.;"
69_008_scaffold_67_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5243..5740)
DNA (498bp) protein (166aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NLK9_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO84679.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_67_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5922..6161
DNA (240bp) protein (80aa)
Uncharacterized protein n=35 Tax=Escherichia coli RepID=D2NLL0_ECOS5
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:KEJ56137.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_008_scaffold_67_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6200..7285)
DNA (1086bp) protein (362aa)
Lytic murein transglycosylase B n=28 Tax=Escherichia RepID=D2NLL1_ECOS5
lytic murein transglycosylase B
Murein hydrolase effector LrgB {ECO:0000313|EMBL:AJO84681.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_67_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7542..8105
DNA (564bp) protein (188aa)
Glucitol/sorbitol permease IIC component n=304 Tax=Escherichia RepID=E2QQF0_ECOLX
srlA; PTS sorbitol transporter subunit IIC
Glucitol/sorbitol-specific enzyme IIC component of PTS {ECO:0000313|EMBL:CAR09316.2}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
69_008_scaffold_67_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8102..9061
DNA (960bp) protein (320aa)
srlE; Glucitol/sorbitol-specific phosphotransferase enzyme IIB component (EC:2.7.1.69)
Glucitol/sorbitol-specific phosphotransferase enzyme n=209 Tax=Escherichia RepID=E2QQF1_ECOLX
Glucitol/sorbitol-specific phosphotransferase enzyme IIB component (PTS system glucitol/sorbitol-specific EIIB component)(EII-Gut) {ECO:0000313|EMBL:EGI49136.1}; TaxID=656393 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H299.;"
69_008_scaffold_67_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9072..9443
DNA (372bp) protein (124aa)
PTS system, glucitol/sorbitol-specific IIA component family protein {ECO:0000313|EMBL:KEJ56141.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KEJ56141.1};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
PTS system, glucitol/sorbitol-specific, IIA component n=67 Tax=Escherichia coli RepID=B1LQ22_ECOSM
PTS sorbitol transporter subunit IIA
69_008_scaffold_67_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9447..10226
DNA (780bp) protein (260aa)
sorbitol-6-phosphate dehydrogenase (EC:1.1.1.140); K00068 sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
Sorbitol-6-phosphate 2-dehydrogenase {ECO:0000313|EMBL:KEJ56142.1}; EC=1.1.1.140 {ECO:0000313|EMBL:KEJ56142.1};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Sorbitol-6-phosphate 2-dehydrogenase n=308 Tax=Escherichia RepID=E2QQF3_ECOLX
69_008_scaffold_67_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10332..10691
DNA (360bp) protein (120aa)
Glucitol operon activator protein n=650 Tax=Enterobacteriaceae RepID=GUTM_ECOLI
gutM; DNA-binding transcriptional activator of glucitol operon; K02466 glucitol operon activator protein
Glucitol operon activator family protein {ECO:0000313|EMBL:KDZ36437.1}; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
69_008_scaffold_67_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10758..11531
DNA (774bp) protein (258aa)
Glucitol operon repressor n=381 Tax=Escherichia RepID=E2QQF5_ECOLX
srlR; glucitol operon repressor
Transcriptional regulator {ECO:0000313|EMBL:EYZ96748.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
69_008_scaffold_67_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11524..12489
DNA (966bp) protein (322aa)
Arabinose 5-phosphate isomerase {ECO:0000256|PIRNR:PIRNR004692}; Short=API {ECO:0000256|PIRNR:PIRNR004692};; EC=5.3.1.13 {ECO:0000256|PIRNR:PIRNR004692};; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
Arabinose 5-phosphate isomerase n=2 Tax=Escherichia coli RepID=L3XVI4_ECOLX
hypothetical protein
69_008_scaffold_67_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12486..14000)
DNA (1515bp) protein (505aa)
Anaerobic nitric oxide reductase transcription regulator NorR n=140 Tax=Escherichia RepID=NORR_ECO45
norR; anaerobic nitric oxide reductase transcriptional regulator; K12266 anaerobic nitric oxide reductase transcription regulator
Anaerobic nitric oxide reductase transcription regulator NorR {ECO:0000256|HAMAP-Rule:MF_01314, ECO:0000256|SAAS:SAAS00009293}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_67_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14187..15626
DNA (1440bp) protein (480aa)
Anaerobic nitric oxide reductase flavorubredoxin n=199 Tax=Escherichia RepID=NORV_ECOL6
putative flavodoxin
Anaerobic nitric oxide reductase flavorubredoxin {ECO:0000256|HAMAP-Rule:MF_01312}; Short=FlRd {ECO:0000256|HAMAP-Rule:MF_01312};; Short=FlavoRb {ECO:0000256|HAMAP-Rule:MF_01312};; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
69_008_scaffold_67_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15623..16756
DNA (1134bp) protein (378aa)
ygbD; FlRd-NAD+ reductase; K12265 nitric oxide reductase FlRd-NAD(+) reductase [EC:1.18.1.-]
Nitric oxide reductase FlRd-NAD(+) reductase {ECO:0000256|HAMAP-Rule:MF_01313, ECO:0000256|SAAS:SAAS00194831}; EC=1.18.1.- {ECO:0000256|HAMAP-Rule:MF_01313, ECO:0000256|SAAS:SAAS00194837};; Flavorubredoxin reductase {ECO:0000256|HAMAP-Rule:MF_01313}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
Nitric oxide reductase FlRd-NAD(+) reductase n=38 Tax=Escherichia coli RepID=D2NLM1_ECOS5
69_008_scaffold_67_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16978..19230)
DNA (2253bp) protein (751aa)
Hydrogenase maturation factor n=36 Tax=Escherichia coli RepID=G0D9K6_ECOLX
Carbamoyl phosphate phosphatase {ECO:0000313|EMBL:AJO86662.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
transcriptional regulator
69_008_scaffold_67_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19383..19910)
DNA (528bp) protein (176aa)
Electron transport protein HydN n=1315 Tax=Enterobacteriaceae RepID=HYDN_ECO57
hydN; electron transport protein HydN; K05796 electron transport protein HydN
Electron transporter hydN {ECO:0000313|EMBL:EQP47516.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
69_008_scaffold_67_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20018..20221
DNA (204bp) protein (68aa)
Uncharacterized protein n=40 Tax=Escherichia coli RepID=U9ZMG3_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO84693.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_67_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20338..20775
DNA (438bp) protein (146aa)
Uncharacterized protein n=48 Tax=Escherichia coli RepID=D2NLM4_ECOS5
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGI14321.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
69_008_scaffold_67_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20867..21286)
DNA (420bp) protein (140aa)
HTH-type transcriptional regulator ygjM n=3 Tax=Enterobacteriaceae RepID=D6I028_ECOLX
hypothetical protein
XRE family transcriptional regulator {ECO:0000313|EMBL:EYY80679.1}; TaxID=1446735 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:NM str. 2010C-4788.;"
69_008_scaffold_67_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21522..21989)
DNA (468bp) protein (156aa)
hycI; hydrogenase maturation peptidase HycI (EC:3.4.23.-); K08315 hydrogenase 3 maturation protease [EC:3.4.23.51]
Hydrogenase maturation peptidase HycI {ECO:0000313|EMBL:KEJ56156.1}; EC=3.4.23.- {ECO:0000313|EMBL:KEJ56156.1};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Hydrogenase 3 maturation protease n=136 Tax=Escherichia RepID=A1AEQ8_ECOK1
69_008_scaffold_67_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21982..22392)
DNA (411bp) protein (137aa)
Formate hydrogenlyase maturation protein hych n=171 Tax=Escherichia RepID=E2QQG7_ECOLX
protein required for maturation of hydrogenase 3; K15834 formate hydrogenlyase maturation protein HycH
Formate hydrogenlyase maturation protein HycH {ECO:0000313|EMBL:CDN83319.1}; HycH protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_008_scaffold_67_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22389..23156)
DNA (768bp) protein (256aa)
Formate hydrogenlyase subunit n=59 Tax=Escherichia coli RepID=D2NLM8_ECOS5
formate hydrogenlyase subunit
Formate hydrogenlyase {ECO:0000313|EMBL:AJO84698.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_67_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23156..23698)
DNA (543bp) protein (181aa)
Formate hydrogenlyase subunit n=111 Tax=Escherichia RepID=D2NLM9_ECOS5
formate hydrogenlyase subunit
Formate hydrogenlyase subunit {ECO:0000313|EMBL:BAI56053.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_67_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23708..25417)
DNA (1710bp) protein (570aa)
Hydrogenase 4, large subunit {ECO:0000313|EMBL:EHW13897.1}; EC=1.-.-.- {ECO:0000313|EMBL:EHW13897.1};; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
Formate hydrogenlyase subunit 5 n=930 Tax=Enterobacteriaceae RepID=C3SXR7_ECOLX
hycE; hydrogenase 3, large subunit; K15830 formate hydrogenlyase subunit 5
69_008_scaffold_67_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25435..26358)
DNA (924bp) protein (308aa)
Formate hydrogenlyase subunit 4 n=409 Tax=Enterobacteriaceae RepID=E2QQH1_ECOLX
hycD; formate hydrogenlyase subunit 4; K15829 formate hydrogenlyase subunit 4
Formate hydrogenlyase subunit 4 {ECO:0000313|EMBL:EZJ37752.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
69_008_scaffold_67_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26361..28187)
DNA (1827bp) protein (609aa)
Formate hydrogenlyase subunit n=38 Tax=Escherichia coli RepID=D2NLN2_ECOS5
NADH-Ubiquinone/plastoquinone (Complex I), various chains family protein {ECO:0000313|EMBL:KEJ56162.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
formate hydrogenlyase subunit
Displaying items 1-30 of 88 in total

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