ggKbase home page

69_008_scaffold_104

Search features with annotation key words

Displaying items 1-30 of 44 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_008_scaffold_104_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97..525)
DNA (429bp) protein (143aa)
yicI; putative alpha-glucosidase; K01811 alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
Glycosyl hydrolase, family 31 {ECO:0000313|EMBL:EFJ76138.1}; EC=3.2.1.- {ECO:0000313|EMBL:EFJ76138.1};; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
Alpha-xylosidase n=19 Tax=Escherichia coli RepID=L3BI02_ECOLX
69_008_scaffold_104_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(535..1917)
DNA (1383bp) protein (461aa)
Glycoside/pentoside/hexuronide transporter n=162 Tax=Escherichia coli RepID=C2DJP4_ECOLX
yicJ; putative transporter
Hypothetical symporter YicJ {ECO:0000313|EMBL:CDN84422.1}; YicJ protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_008_scaffold_104_trna_1
unknown

Not on your lists

2210..2300
DNA (91bp)
transferRNA SeC(p)
69_008_scaffold_104_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2357..3394
DNA (1038bp) protein (346aa)
ErhM n=150 Tax=Escherichia RepID=Q1AP19_ECOLX
hypothetical protein
Putative cytoplasmic protein {ECO:0000313|EMBL:ABE09639.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
69_008_scaffold_104_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3964..4461
DNA (498bp) protein (166aa)
Uncharacterized protein n=38 Tax=Escherichia coli RepID=D2NCR8_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO85724.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_104_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4639..5562
DNA (924bp) protein (308aa)
Uncharacterized inner membrane transporter yicL n=111 Tax=Escherichia RepID=E2QH24_ECOLX
carboxylate/amino acid/amine transporter
Putative permease transporter {ECO:0000313|EMBL:EGI14126.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
69_008_scaffold_104_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5566..6384)
DNA (819bp) protein (273aa)
Lipoprotein n=356 Tax=Escherichia RepID=Q5I3I2_ECOLX
nlpA; Cytoplasmic membrane lipoprotein-28; K02073 D-methionine transport system substrate-binding protein
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_104_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6606..6899
DNA (294bp) protein (98aa)
Uncharacterized protein n=50 Tax=Escherichia RepID=D2NCS1_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJO85727.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_104_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6940..8178)
DNA (1239bp) protein (413aa)
Purine ribonucleoside efflux pump NepI n=49 Tax=Escherichia coli RepID=D2ND88_ECOS5
nepI; Ribonucleoside transporter
Purine ribonucleoside efflux pump NepI {ECO:0000256|HAMAP-Rule:MF_01189}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_104_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8358..8717
DNA (360bp) protein (120aa)
Uncharacterized protein n=52 Tax=Escherichia RepID=D2ND89_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI57048.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_104_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8701..9024
DNA (324bp) protein (108aa)
Toxin-antitoxin system, antitoxin component, Xre family n=52 Tax=Escherichia RepID=F4T5M8_ECOLX
Putative DNA-binding protein; K07726 putative transcriptional regulator
Putative DNA-binding protein {ECO:0000313|EMBL:CDL44618.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
69_008_scaffold_104_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9140..9592)
DNA (453bp) protein (151aa)
Uncharacterized protein YicN n=1161 Tax=Enterobacteriaceae RepID=YICN_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDU62721.1}; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 53638.;"
69_008_scaffold_104_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9645..10979)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=37 Tax=Escherichia coli RepID=D2ND92_ECOS5
Putative xanthine/uracil/thiamine/ascorbate permease family protein; K06901 putative MFS transporter, AGZA family, xanthine/uracil permease
Uncharacterized protein {ECO:0000313|EMBL:CDN84500.1}; YicO protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_008_scaffold_104_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11154..12920
DNA (1767bp) protein (589aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Adenine deaminase n=78 Tax=Escherichia coli RepID=ADEC_ECO81
putative adenine deaminase
69_008_scaffold_104_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12967..14358)
DNA (1392bp) protein (464aa)
Hexose phosphate transport protein n=127 Tax=Enterobacteriaceae RepID=B1LKZ1_ECOSM
uhpT; antiporter
Hexose phosphate transporter {ECO:0000313|EMBL:EOU87659.1}; TaxID=1169354 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE37.;"
69_008_scaffold_104_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14496..15815)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=47 Tax=Escherichia RepID=D2ND95_ECOS5
regulatory protein
Regulatory protein uhpC {ECO:0000313|EMBL:KEJ54734.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_008_scaffold_104_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15825..17327)
DNA (1503bp) protein (501aa)
sensory histidine kinase (EC:2.7.13.3)
Two-component sensor kinase n=2 Tax=Escherichia coli RepID=D2ND96_ECOS5
Two-component sensor kinase {ECO:0000313|EMBL:BAI57055.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_104_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17327..17917)
DNA (591bp) protein (197aa)
DNA-binding response regulator in two-component regulatory system wtih UhpB n=4 Tax=Escherichia coli RepID=D8ARG6_ECOLX
DNA-binding transcriptional activator UhpA; K07686 two-component system, NarL family, uhpT operon response regulator UhpA
DNA-binding response regulator in two-component regulatory system wtih UhpB {ECO:0000313|EMBL:EII36217.1}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
69_008_scaffold_104_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18401..19261
DNA (861bp) protein (287aa)
Uncharacterized protein n=28 Tax=Escherichia coli RepID=D2ND98_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI57057.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_104_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19327..19617)
DNA (291bp) protein (97aa)
ilvN; acetolactate synthase I small subunit; K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6]
Acetolactate synthase isozyme 1 small subunit {ECO:0000313|EMBL:KEN94472.1}; EC=2.2.1.6 {ECO:0000313|EMBL:KEN94472.1};; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
Acetolactate synthase isozyme 1 small subunit n=1267 Tax=Enterobacteriaceae RepID=ILVN_ECO57
69_008_scaffold_104_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19621..21309)
DNA (1689bp) protein (563aa)
ilvB; acetolactate synthase large subunit (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
Acetolactate synthase n=36 Tax=Escherichia coli RepID=D2NDA0_ECOS5
69_008_scaffold_104_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21914..23098
DNA (1185bp) protein (395aa)
Multidrug resistance protein D n=33 Tax=Escherichia coli RepID=L3FMY5_ECOLX
emrD; multidrug resistance protein D
EmrD protein; Multidrug resistance protein D {ECO:0000313|EMBL:CDN84509.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_008_scaffold_104_22
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23106..23603)
DNA (498bp) protein (166aa)
Uncharacterized protein n=198 Tax=Escherichia RepID=Q1R4Q7_ECOUT
yidF; Putative transcriptional regulator; K06871 uncharacterized protein
Uncharacterized protein {ECO:0000313|EMBL:CDC75572.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
69_008_scaffold_104_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23600..23962)
DNA (363bp) protein (121aa)
Inner membrane protein YidG n=1269 Tax=Enterobacteriaceae RepID=YIDG_ECO57
yidG; hypothetical protein
Inner membrane protein YidG {ECO:0000313|EMBL:EGI08917.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
69_008_scaffold_104_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23952..24299)
DNA (348bp) protein (116aa)
Uncharacterized protein n=47 Tax=Escherichia RepID=D2NDA5_ECOS5
hypothetical protein; K00389 putative membrane protein
Membrane protein {ECO:0000313|EMBL:AJO85745.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_104_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24359..25537)
DNA (1179bp) protein (393aa)
yidJ; sulfatase/phosphatase YidJ; K01138 uncharacterized sulfatase [EC:3.1.6.-]
Sulfatase/phosphatase n=23 Tax=Escherichia coli RepID=L2ZCB2_ECOLX
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Putative sulfatase {ECO:0000313|EMBL:CDN84513.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_008_scaffold_104_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25491..25853)
DNA (363bp) protein (121aa)
yidJ2; Putative sulfatase (EC:3.1.6.6)
Uncharacterized protein n=25 Tax=Escherichia coli RepID=L2ZD93_ECOLX
Escherichia coli O25b:H4-ST131 str. EC958 chromosome, complete genome; Putative sulfatase {ECO:0000313|EMBL:CDN84514.1}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_008_scaffold_104_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25850..27565)
DNA (1716bp) protein (572aa)
Solute:sodium symporter (SSS) family transporter n=35 Tax=Escherichia coli RepID=L2ZE48_ECOLX
putative myo-inositol transport protein
Putative symporter YidK {ECO:0000313|EMBL:CDN84515.1}; YidK protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_008_scaffold_104_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27732..28598
DNA (867bp) protein (289aa)
Predicted DNA-binding transcriptional regulator n=71 Tax=Escherichia coli RepID=B7UMF1_ECO27
DNA-binding transcriptional regulator
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EHU06962.1}; TaxID=868134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1B.;"
69_008_scaffold_104_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28688..30349)
DNA (1662bp) protein (554aa)
Transporter n=84 Tax=Escherichia RepID=V8KTX1_ECOLX
Putative transport protein YidE {ECO:0000256|HAMAP-Rule:MF_01016}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
transporter
Displaying items 1-30 of 44 in total

View Taxonomy