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69_008_scaffold_138

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_008_scaffold_138_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1065
DNA (1065bp) protein (355aa)
fabF; 3-oxoacyl-ACP synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Escherichia coli MS 196-1 RepID=D8C603_ECOLX
69_008_scaffold_138_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1185..1994
DNA (810bp) protein (270aa)
pabC; Aminodeoxychorismate lyase (EC:4.1.3.38)
Aminodeoxychorismate lyase {ECO:0000313|EMBL:EHU29444.1}; EC=4.1.3.38 {ECO:0000313|EMBL:EHU29444.1};; TaxID=868137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1E.;"
4-amino-4-deoxychorismate lyase n=262 Tax=Escherichia RepID=A1A9Z0_ECOK1
69_008_scaffold_138_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1997..3019
DNA (1023bp) protein (341aa)
Uncharacterized protein n=826 Tax=Enterobacteriaceae RepID=A7ZKK0_ECO24
yceG; hypothetical protein; K07082 UPF0755 protein
YceG family protein {ECO:0000313|EMBL:ESA93380.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
69_008_scaffold_138_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3009..3650
DNA (642bp) protein (214aa)
tmk; thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9]
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
Thymidylate kinase n=268 Tax=Escherichia RepID=KTHY_ECO27
69_008_scaffold_138_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3647..4651
DNA (1005bp) protein (335aa)
holB; DNA polymerase III subunit delta' (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
DNA polymerase III subunit delta {ECO:0000313|EMBL:AJO83035.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AJO83035.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
DNA polymerase III delta' subunit n=37 Tax=Escherichia coli RepID=D2NHB4_ECOS5
69_008_scaffold_138_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4662..5459
DNA (798bp) protein (266aa)
putative DNAse; K03424 TatD DNase family protein [EC:3.1.21.-]
Uncharacterized deoxyribonuclease YcfH n=1231 Tax=Enterobacteriaceae RepID=YCFH_ECO57
TatD DNase {ECO:0000313|EMBL:EQQ08752.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
69_008_scaffold_138_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5754..7187
DNA (1434bp) protein (478aa)
PTS system, glucose-specific IIB component / PTS system, glucose-specific IIC component {ECO:0000313|EMBL:CDL43259.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CDL43259.1};; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
PTS system glucose-specific IIBC components n=38 Tax=Escherichia coli RepID=D2NHB6_ECOS5
PTS glucose transporter subunit IIBC
69_008_scaffold_138_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7247..9436)
DNA (2190bp) protein (730aa)
Outer membrane receptor for uptake ferric iron n=26 Tax=Escherichia coli RepID=G0D6S0_ECOLX
Ferric-rhodotorulic acid transporter {ECO:0000313|EMBL:AJO83038.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
outer membrane receptor for uptake ferric iron; K02014 iron complex outermembrane recepter protein
69_008_scaffold_138_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9770..10129
DNA (360bp) protein (120aa)
HIT-like protein HinT n=1041 Tax=Enterobacteriaceae RepID=HINT_ECO57
hinT; purine nucleoside phosphoramidase; K12150 HIT-like protein HinT
HIT domain protein {ECO:0000313|EMBL:END93616.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
69_008_scaffold_138_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10132..10509
DNA (378bp) protein (126aa)
Uncharacterized protein n=83 Tax=Escherichia RepID=B7NKH5_ECO7I
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV06511.1}; TaxID=1169355 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE38.;"
69_008_scaffold_138_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10523..11164
DNA (642bp) protein (214aa)
Penicillin-binding protein activator LpoB n=38 Tax=Escherichia coli RepID=D2NHC1_ECOS5
ycfM; hypothetical protein; K07337 hypothetical protein
Penicillin-binding protein activator LpoB {ECO:0000256|HAMAP-Rule:MF_01889}; Short=PBP activator LpoB {ECO:0000256|HAMAP-Rule:MF_01889};; Flags: Precursor;; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_008_scaffold_138_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11145..11969
DNA (825bp) protein (275aa)
thiK; thiamine kinase; K07251 thiamine kinase [EC:2.7.1.89]
Thiamine kinase {ECO:0000256|HAMAP-Rule:MF_01604}; EC=2.7.1.89 {ECO:0000256|HAMAP-Rule:MF_01604};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Thiamine kinase n=153 Tax=Escherichia RepID=THIK_ECOL6
69_008_scaffold_138_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11980..13005
DNA (1026bp) protein (342aa)
nagZ; Beta hexosaminidase (EC:3.2.1.52); K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
Beta-hexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00015774}; EC=3.2.1.52 {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00114579};; Beta-N-acetylhexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; N-acetyl-beta-glucosaminidase {ECO:0000256|HAMAP-Rule:MF_00364}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
Beta-hexosaminidase n=101 Tax=Escherichia RepID=NAGZ_ECO27
69_008_scaffold_138_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13028..13570
DNA (543bp) protein (181aa)
UPF0227 protein YcfP n=1256 Tax=Enterobacteriaceae RepID=YCFP_ECO24
ycfP; hypothetical protein; K07000
UPF0227 protein YcfP {ECO:0000256|HAMAP-Rule:MF_01047}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
69_008_scaffold_138_15
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13969..15273
DNA (1305bp) protein (435aa)
ndh; NADH dehydrogenase (EC:1.6.99.3); K03885 NADH dehydrogenase [EC:1.6.99.3]
NadH dehydrogenase n=348 Tax=Enterobacteriaceae RepID=E2QKJ3_ECOLX
NADH dehydrogenase {ECO:0000313|EMBL:CDC76333.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
69_008_scaffold_138_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15500..16039
DNA (540bp) protein (180aa)
Uncharacterized protein YcfJ n=809 Tax=Enterobacteriaceae RepID=YCFJ_ECOL6
ycfJ; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZE29696.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
69_008_scaffold_138_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16101..16733)
DNA (633bp) protein (211aa)
Uncharacterized protein n=37 Tax=Escherichia coli RepID=D2NHC7_ECOS5
ycfQ; Putative transcriptional regulator
YcfQ gene product {ECO:0000313|EMBL:CDN81569.1}; YcfQ protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_008_scaffold_138_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16974..17231
DNA (258bp) protein (86aa)
Multiple stress resistance protein BhsA n=1228 Tax=Enterobacteriaceae RepID=BHSA_ECO57
hypothetical protein; K12151 multiple stress resistance protein BhsA
Stress resistance and biofilm formation protein {ECO:0000313|EMBL:EHW20692.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
69_008_scaffold_138_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17314..18273)
DNA (960bp) protein (320aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=B7UPC9_ECO27
ycfS; hypothetical protein
LysM domain protein {ECO:0000313|EMBL:EFR14123.1}; TaxID=670897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2362-75.;"
69_008_scaffold_138_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18419..21937)
DNA (3519bp) protein (1173aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Transcription-repair-coupling factor n=10 Tax=Enterobacteriaceae RepID=L2XEV2_ECOLX
transcription-repair coupling factor
69_008_scaffold_138_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21992..23065)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=45 Tax=Escherichia coli RepID=D2NHD1_ECOS5
ycfT; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDL43283.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
69_008_scaffold_138_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23326..24525
DNA (1200bp) protein (400aa)
Lipoprotein-releasing system transmembrane protein LolC n=1097 Tax=Bacteria RepID=LOLC_ECO57
ycfU; outer membrane-specific lipoprotein transporter subunit LolC; K09808 lipoprotein-releasing system permease protein
Lipoprotein-releasing system transmembrane protein lolC {ECO:0000313|EMBL:EQN28393.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
69_008_scaffold_138_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24518..25219
DNA (702bp) protein (234aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041694}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041671};; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
Lipoprotein-releasing system ATP-binding protein LolD n=659 Tax=Enterobacteriaceae RepID=LOLD_ECOL5
cell division protein FtsE
69_008_scaffold_138_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25225..26463
DNA (1239bp) protein (413aa)
Outer membrane-specific lipoprotein transporter subunit membrane component of ABC superfamily n=37 Tax=Escherichia RepID=B7LPQ3_ESCF3
lolE; Outer membrane-specific lipoprotein transporter subunit; K09808 lipoprotein-releasing system permease protein
Lipoprotein releasing system transmembrane protein LolE {ECO:0000313|EMBL:CDL43286.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
69_008_scaffold_138_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26492..27403
DNA (912bp) protein (304aa)
N-acetyl-D-glucosamine kinase {ECO:0000256|HAMAP-Rule:MF_01271, ECO:0000256|SAAS:SAAS00012116}; EC=2.7.1.59 {ECO:0000256|HAMAP-Rule:MF_01271};; GlcNAc kinase {ECO:0000256|HAMAP-Rule:MF_01271}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
N-acetyl-D-glucosamine kinase n=50 Tax=Escherichia coli RepID=D2NHD5_ECOS5
putative transcriptional regulator
69_008_scaffold_138_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27419..28240
DNA (822bp) protein (274aa)
cobB; NAD-dependent deacetylase; K12410 NAD-dependent deacetylase [EC:3.5.1.-]
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
NAD-dependent protein deacylase n=1 Tax=Escherichia coli HVH 108 (4-6924867) RepID=V4EYT1_ECOLX
69_008_scaffold_138_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28378..29166)
DNA (789bp) protein (263aa)
Inner membrane protein ycfZ n=36 Tax=Escherichia coli RepID=L2ZTA9_ECOLX
ycfZ; hypothetical protein
Putative factor {ECO:0000313|EMBL:CDL43289.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
69_008_scaffold_138_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29163..29624)
DNA (462bp) protein (154aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NHD8_ECOS5
ymfA; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDN81580.1}; YmfA protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_008_scaffold_138_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29682..30728)
DNA (1047bp) protein (349aa)
Putrescine-binding periplasmic protein n=303 Tax=Escherichia RepID=B1LI21_ECOSM
potD; polyamine transporter subunit; K11069 spermidine/putrescine transport system substrate-binding protein
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
69_008_scaffold_138_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30725..31519)
DNA (795bp) protein (265aa)
Spermidine/putrescine transport system permease protein PotC n=1392 Tax=Enterobacteriaceae RepID=POTC_ECO57
potC; spermidine/putrescine ABC transporter membrane protein; K11070 spermidine/putrescine transport system permease protein
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KDV27152.1}; TaxID=1446583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H25 str. 07-3858.;"
Displaying items 1-30 of 33 in total

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