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69_008_scaffold_146

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Displaying items 31-46 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_008_scaffold_146_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25909..27189)
DNA (1281bp) protein (427aa)
gabT; 4-aminobutyrate aminotransferase (EC:2.6.1.19)
Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase {ECO:0000313|EMBL:CDL49747.1}; EC=2.6.1.19 {ECO:0000313|EMBL:CDL49747.1};; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
4-aminobutyrate aminotransferase n=36 Tax=Escherichia coli RepID=D2NLH5_ECOS5
69_008_scaffold_146_31
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27203..28651)
DNA (1449bp) protein (483aa)
gabD; Succinate-semialdehyde dehydrogenase-NADP+ (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Succinate-semialdehyde dehydrogenase [NADP+] {ECO:0000313|EMBL:CDL49746.1}; EC=1.2.1.16 {ECO:0000313|EMBL:CDL49746.1};; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
Succinate-semialdehyde dehydrogenase n=39 Tax=Escherichia coli RepID=D2NLH4_ECOS5
69_008_scaffold_146_32
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28677..29942)
DNA (1266bp) protein (422aa)
L-2-hydroxyglutarate oxidase LhgO {ECO:0000256|HAMAP-Rule:MF_00990}; EC=1.1.3.15 {ECO:0000256|HAMAP-Rule:MF_00990};; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
Uncharacterized protein n=38 Tax=Escherichia RepID=D2NLH3_ECOS5
hypothetical protein
69_008_scaffold_146_33
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29962..30939)
DNA (978bp) protein (326aa)
Protein CsiD n=36 Tax=Escherichia coli RepID=D2NLH2_ECOS5
putative DNA damage inducible protein; K15737 protein CsiD
Protein CsiD {ECO:0000256|HAMAP-Rule:MF_01083}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_008_scaffold_146_34
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32152..32634)
DNA (483bp) protein (161aa)
SsrA-binding protein n=1351 Tax=Enterobacteriaceae RepID=SSRP_ECO24
SsrA-binding protein; K03664 SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; Small protein B {ECO:0000256|HAMAP-Rule:MF_00023}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
69_008_scaffold_146_35
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32766..33242
DNA (477bp) protein (159aa)
Persistence and stress-resistance toxin PasT n=390 Tax=Escherichia RepID=PAST_ECOL6
yfjG; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP48256.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
69_008_scaffold_146_36
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33232..33522
DNA (291bp) protein (97aa)
Persistence and stress-resistance antitoxin PasI n=380 Tax=Escherichia RepID=PASI_ECOL6
hypothetical protein; K09801 hypothetical protein
UPF0125 protein yfjF {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_146_37
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33584..33925)
DNA (342bp) protein (114aa)
Outer membrane protein assembly factor BamE n=1339 Tax=Enterobacteriaceae RepID=BAME_ECOL6
hypothetical protein; K06186 small protein A
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2719100.;"
69_008_scaffold_146_38
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34074..35735)
DNA (1662bp) protein (554aa)
DNA repair protein RecN n=48 Tax=Escherichia RepID=E2QQ72_ECOLX
recN; DNA repair protein; K03631 DNA repair protein RecN (Recombination protein N)
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128, ECO:0000313|EMBL:CDN83254.1}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_008_scaffold_146_39
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35821..36699)
DNA (879bp) protein (293aa)
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23); K00858 NAD+ kinase [EC:2.7.1.23]
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1181728 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE182.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=370 Tax=Escherichia RepID=PPNK_ECO27
69_008_scaffold_146_40
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36822..37343
DNA (522bp) protein (174aa)
Protein GrpE n=1195 Tax=Enterobacteriaceae RepID=GRPE_ECO27
grpE; heat shock protein GrpE; K03687 molecular chaperone GrpE
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
69_008_scaffold_146_41
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37397..38638)
DNA (1242bp) protein (414aa)
UPF0053 inner membrane protein yfjD n=102 Tax=Enterobacteriaceae RepID=E2QQ69_ECOLX
yfjD; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHU37705.1}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
69_008_scaffold_146_42
Escherichia coli CAG:4, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38704..39570)
DNA (867bp) protein (289aa)
Inner membrane protein ypjD n=125 Tax=Escherichia RepID=E2QQ68_ECOLX
hypothetical protein
Predicted inner membrane protein {ECO:0000313|EMBL:CDC83018.1}; TaxID=1263075 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; environmental samples.;" source="Escherichia coli CAG:4.;"
69_008_scaffold_146_43
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


39662..41023
DNA (1362bp) protein (454aa)
Signal recognition particle protein n=1280 Tax=Enterobacteriaceae RepID=SRP54_ECO57
ffh; signal recognition particle protein; K03106 signal recognition particle subunit SRP54
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
69_008_scaffold_146_44
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


41160..41366
DNA (207bp) protein (69aa)
30S ribosomal protein S16 n=1 Tax=Escherichia coli UMEA 3233-1 RepID=T9GL02_ECOLX
30S ribosomal protein S16 {ECO:0000313|EMBL:AKE59649.1}; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus Y19.;"
rpsP; 30S ribosomal protein S16
69_008_scaffold_146_45
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41385..41933
DNA (549bp) protein (183aa)
Ribosome maturation factor RimM n=1393 Tax=Enterobacteriaceae RepID=RIMM_SHIBS
rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
Displaying items 31-46 of 46 in total

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