ggKbase home page

69_008_scaffold_146

Search features with annotation key words

Displaying items 1-30 of 46 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_008_scaffold_146_trna_1
unknown

Not on your lists

1..71
DNA (71bp)
transferRNA Arg
69_008_scaffold_146_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

355..921
DNA (567bp) protein (189aa)
HAD-superfamily hydrolase, subfamily IA n=997 Tax=Enterobacteriaceae RepID=A7ZQC3_ECO24
yqaB; fructose-1-phosphatase
Phosphatase YqaB {ECO:0000313|EMBL:ELI23234.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
69_008_scaffold_146_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

918..1346
DNA (429bp) protein (143aa)
Conserved inner membrane protein n=253 Tax=Escherichia RepID=B7UHB2_ECO27
yqaA; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDN83292.1}; YqaA protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
69_008_scaffold_146_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1419..2975
DNA (1557bp) protein (519aa)
glutamate--cysteine ligase (EC:6.3.2.2); K01919 glutamate--cysteine ligase [EC:6.3.2.2]
Glutamate--cysteine ligase {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391};; Gamma-ECS {ECO:0000256|HAMAP-Rule:MF_00578}; Gamma-glutamylcysteine synthetase {ECO:0000256|HAMAP-Rule:MF_00578}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
Glutamate--cysteine ligase n=578 Tax=Enterobacteriaceae RepID=GSH1_ECO45
69_008_scaffold_146_4
Escherichia fergusonii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3125..3640
DNA (516bp) protein (172aa)
ygaG; S-ribosylhomocysteinase; K07173 S-ribosylhomocysteine lyase [EC:4.4.1.21]
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=981367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia fergusonii ECD227.;"
S-ribosylhomocysteine lyase n=309 Tax=Escherichia RepID=LUXS_ECO81
69_008_scaffold_146_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3691..4803)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=33 Tax=Escherichia coli RepID=D2NLK0_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI56024.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_146_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4800..5507)
DNA (708bp) protein (236aa)
Uncharacterized protein n=35 Tax=Escherichia coli RepID=D2NLJ9_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI56023.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_146_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5765..7303)
DNA (1539bp) protein (513aa)
Multidrug resistance protein B n=228 Tax=Escherichia RepID=E2QQE0_ECOLX
emrB; multidrug efflux system protein; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
Multidrug resistance protein B {ECO:0000313|EMBL:EZJ49600.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
69_008_scaffold_146_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7320..8492)
DNA (1173bp) protein (391aa)
Multidrug resistance protein A n=758 Tax=Enterobacteriaceae RepID=E2QQD9_ECOLX
emrA; multidrug efflux system; K03543 multidrug resistance protein A
Multidrug resistance protein A {ECO:0000313|EMBL:ESA67956.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
69_008_scaffold_146_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8619..9149)
DNA (531bp) protein (177aa)
Transcription repressor protein n=51 Tax=Escherichia RepID=G0D8S4_ECOLX
emrR; Transcription repressor protein; K15974 MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
Transcriptional repressor MprA (Protein emrR) {ECO:0000313|EMBL:EGI14293.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
69_008_scaffold_146_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9240..9575)
DNA (336bp) protein (112aa)
Uncharacterized protein ygaH n=591 Tax=Enterobacteriaceae RepID=C3SY62_ECOLX
putative L-valine exporter
Branched-chain amino acid transport family protein {ECO:0000313|EMBL:KEO30903.1}; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C2.;"
69_008_scaffold_146_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9565..10302)
DNA (738bp) protein (246aa)
Inner membrane protein ygaZ n=1010 Tax=Enterobacteriaceae RepID=C3SY67_ECOLX
ygaZ; putative transporter
Membrane protein {ECO:0000313|EMBL:EZD92198.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
69_008_scaffold_146_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10426..11610)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NLJ3_ECOS5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI56017.1}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
69_008_scaffold_146_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11802..12794)
DNA (993bp) protein (331aa)
Glycine/betaine/proline ABC transporter substrate binding component n=38 Tax=Escherichia coli RepID=D2NLJ2_ECOS5
proX; Glycine betaine binding periplasmic precursor protein; K02002 glycine betaine/proline transport system substrate-binding protein
Glycine/betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJO84662.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_146_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12851..13915)
DNA (1065bp) protein (355aa)
Glycine/betaine/proline ABC transporter permease component n=36 Tax=Escherichia coli RepID=D2NLJ1_ECOS5
proW; Glycine betaine/L-proline transport system permease; K02001 glycine betaine/proline transport system permease protein
Glycine/betaine ABC transporter permease {ECO:0000313|EMBL:AJO84661.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
69_008_scaffold_146_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13908..15110)
DNA (1203bp) protein (401aa)
Glycine/betaine/proline ABC transporter ATP-binding component n=51 Tax=Escherichia coli RepID=D2NLJ0_ECOS5
glycine/betaine ABC transporter ATP-binding protein
Glycine betaine/L-proline transport ATP binding subunit {ECO:0000313|EMBL:KEJ56114.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_008_scaffold_146_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15466..16425)
DNA (960bp) protein (320aa)
nrdF; Ribonucleotide-diphosphate reductase 2,beta subunit (EC:1.17.4.1); K00526 ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
Ribonucleoside-diphosphate reductase subunit beta n=39 Tax=Escherichia RepID=D2NLI9_ECOS5
69_008_scaffold_146_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16435..18579)
DNA (2145bp) protein (715aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
Ribonucleoside-diphosphate reductase n=36 Tax=Escherichia coli RepID=D2NLI8_ECOS5
ribonucleoside-diphosphate reductase alpha subunit
69_008_scaffold_146_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18552..18962)
DNA (411bp) protein (137aa)
Protein NrdI n=922 Tax=Enterobacteriaceae RepID=NRDI_ECO57
nrdI; ribonucleotide reductase stimulatory protein; K03647 protein involved in ribonucleotide reduction
Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C2.;"
69_008_scaffold_146_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18959..19204)
DNA (246bp) protein (82aa)
Glutaredoxin-like protein NrdH n=1203 Tax=Enterobacteriaceae RepID=NRDH_ECO57
nrdH; Glutaredoxin-like protein; K06191 glutaredoxin-like protein NrdH
Glutaredoxin-like protein nrdH {ECO:0000313|EMBL:EQN25346.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
69_008_scaffold_146_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19451..19780)
DNA (330bp) protein (110aa)
Uncharacterized protein YgaM n=1302 Tax=Enterobacteriaceae RepID=YGAM_ECO57
ygaM; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDV64083.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
69_008_scaffold_146_21
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19932..20276
DNA (345bp) protein (115aa)
Uncharacterized protein YgaC n=1289 Tax=Enterobacteriaceae RepID=YGAC_ECO57
hypothetical protein
Putative cytoplasmic protein {ECO:0000313|EMBL:EIQ34316.1}; TaxID=766140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 4444-74.;"
69_008_scaffold_146_22
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20313..20762)
DNA (450bp) protein (150aa)
L-alanine exporter AlaE n=1049 Tax=Enterobacteriaceae RepID=ALAE_ECO57
hypothetical protein
L-alanine exporter AlaE {ECO:0000256|HAMAP-Rule:MF_00914}; TaxID=344609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii serotype 18 (strain CDC 3083-94 / BS512).;"
69_008_scaffold_146_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21430..21834
DNA (405bp) protein (135aa)
DNA-binding protein stpA n=304 Tax=Escherichia RepID=E2QQC2_ECOLX
stpA; DNA binding protein; K11685 DNA-binding protein StpA
DNA-binding protein {ECO:0000256|PIRNR:PIRNR002096}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
69_008_scaffold_146_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21881..22405)
DNA (525bp) protein (175aa)
Uncharacterized protein n=50 Tax=Escherichia RepID=D2NLI1_ECOS5
hypothetical protein
Inner membrane protein YgaP {ECO:0000313|EMBL:EGI14275.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
69_008_scaffold_146_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22415..22714)
DNA (300bp) protein (100aa)
Uncharacterized protein n=36 Tax=Escherichia coli RepID=D2NLI0_ECOS5
hypothetical protein
Putative HTH-type transcriptional regulator ygaV {ECO:0000313|EMBL:KEJ56103.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
69_008_scaffold_146_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22897..23055
DNA (159bp) protein (53aa)
UPF0057 membrane protein YqaE n=1411 Tax=Enterobacteriaceae RepID=YQAE_ECO57
yqae; hypothetical protein
Proteolipid membrane potential modulator family protein {ECO:0000313|EMBL:EMW17925.1}; TaxID=1116125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2845650.;"
69_008_scaffold_146_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23139..23588
DNA (450bp) protein (150aa)
Uncharacterized protein YgaU n=633 Tax=Enterobacteriaceae RepID=YGAU_ECOL6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDY66934.1}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
69_008_scaffold_146_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23589..24251)
DNA (663bp) protein (221aa)
Uncharacterized HTH-type transcriptional regulator n=208 Tax=Escherichia coli RepID=E2QQB7_ECOLX
ygaE; DNA-binding transcriptional regulator CsiR; K15735 GntR family transcriptional regulator, carbon starvation induced regulator
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EFR17710.1}; TaxID=670897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2362-75.;"
69_008_scaffold_146_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24272..25672)
DNA (1401bp) protein (467aa)
Gamma-aminobutyrate transport protein n=37 Tax=Escherichia coli RepID=D2NLH6_ECOS5
gamma-aminobutyrate transport protein
Gamma-aminobutyrate transporter {ECO:0000313|EMBL:AJO84646.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Displaying items 1-30 of 46 in total

View Taxonomy