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69_008_scaffold_325

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
69_008_scaffold_325_1
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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88..1224
DNA (1137bp) protein (379aa)
antiporter n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288493F
AspT/YidE/YbjL antiporter duplication domain protein {ECO:0000313|EMBL:EFR33846.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
Predicted permease
69_008_scaffold_325_2
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1280..2488)
DNA (1209bp) protein (403aa)
8-amino-7-oxononanoate synthase {ECO:0000256|SAAS:SAAS00087543}; EC=2.3.1.47 {ECO:0000256|SAAS:SAAS00087543};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
8-amino-7-oxononanoate synthase n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VRG7_CLOBI
8-amino-7-oxononanoate synthase
69_008_scaffold_325_3
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2481..3194)
DNA (714bp) protein (238aa)
6-carboxyhexanoate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_00668}; EC=6.2.1.14 {ECO:0000256|HAMAP-Rule:MF_00668};; Pimeloyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_00668}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
7-keto-8-aminopelargonate synthetase and related enzymes (EC:2.3.1.47)
6-carboxyhexanoate--CoA ligase n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D3Q4_9FIRM
69_008_scaffold_325_4
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3179..3673)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D3Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGY79851.1}; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29427.;"
bioX; biotin biosynthesis protein BioX
69_008_scaffold_325_5
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3767..4150)
DNA (384bp) protein (128aa)
50S ribosomal protein L7/L12 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002889C49
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
hypothetical protein; K02935 large subunit ribosomal protein L7/L12
69_008_scaffold_325_6
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(4196..4786)
DNA (591bp) protein (197aa)
50S ribosomal protein L10 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289572D
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10
69_008_scaffold_325_7
Anaerococcus prevotii, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5103..5657
DNA (555bp) protein (185aa)
proton-coupled thiamine transporter YuaJ n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002895E24
proton-coupled thiamine transporter YuaJ
Proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:ACV28218.1}; TaxID=525919 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii (strain ATCC 9321 / DSM 20548 / JCM 6508 / PC1); (Peptostreptococcus prevotii) (Peptococcus prevotii).;"
69_008_scaffold_325_8
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5746..6447)
DNA (702bp) protein (234aa)
50S ribosomal protein L1 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000287E9DD
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
69_008_scaffold_325_9
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(6487..6912)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Peptoniphilus rhinitidis RepID=UPI00028A2972
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
69_008_scaffold_325_10
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6960..7502)
DNA (543bp) protein (181aa)
antitermination factor NusG n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002892270
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
nusG; NusG antitermination factor; K02601 transcriptional antiterminator NusG
69_008_scaffold_325_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7454..7732)
DNA (279bp) protein (93aa)
preprotein translocase subunit SecE n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002888961
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
69_008_scaffold_325_12
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(7742..7927)
DNA (186bp) protein (62aa)
50S ribosomal protein L33 n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D2X0_9FIRM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus ATCC 29427.;"
50S ribosomal protein L33; K02913 large subunit ribosomal protein L33
69_008_scaffold_325_13
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8087..8968)
DNA (882bp) protein (294aa)
CAAX amino terminal protease n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002887E98
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EFR33172.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
69_008_scaffold_325_14
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9001..11298)
DNA (2298bp) protein (766aa)
DEAD/DEAH box helicase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI0002898E12
DEAD2 domain protein {ECO:0000313|EMBL:EFR33249.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
DEAD/DEAH box helicase
69_008_scaffold_325_15
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11348..11812)
DNA (465bp) protein (155aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
tRNA/rRNA methyltransferase SpoU; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
tRNA methyltransferase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000289B2DD
69_008_scaffold_325_16
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11806..13272)
DNA (1467bp) protein (489aa)
FAD dependent oxidoreductase n=1 Tax=Peptoniphilus rhinitidis RepID=UPI000288917E
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EFR33223.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
FAD dependent oxidoreductase; K07137
Displaying 16 items

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