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71_003_scaffold_59

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Displaying items 1-30 of 72 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_003_scaffold_59_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

208..651
DNA (444bp) protein (148aa)
Uncharacterized protein n=23 Tax=Staphylococcus epidermidis RepID=C5QY17_STAEP
Membrane protein {ECO:0000313|EMBL:ESV19824.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
71_003_scaffold_59_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(638..1081)
DNA (444bp) protein (148aa)
Uncharacterized protein n=18 Tax=Staphylococcus epidermidis RepID=E6JN14_STAEP
Competence protein ComK {ECO:0000313|EMBL:ESV19825.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
71_003_scaffold_59_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1087..1566)
DNA (480bp) protein (160aa)
RNA polymerase sigma factor SigS n=11 Tax=Staphylococcus epidermidis RepID=C5QY15_STAEP
RNA polymerase sigma factor SigS {ECO:0000313|EMBL:EES35802.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
71_003_scaffold_59_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1773..1988
DNA (216bp) protein (72aa)
Uncharacterized protein n=5 Tax=Staphylococcus epidermidis RepID=C5QY14_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES35801.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
71_003_scaffold_59_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2367..3218
DNA (852bp) protein (284aa)
N-acetylmuramoyl-L-alanine amidase, family 4 n=81 Tax=Staphylococcus epidermidis RepID=Q5HND9_STAEQ
N-acetylmuramoyl-L-alanine amidase
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase {ECO:0000313|EMBL:EFE59955.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
71_003_scaffold_59_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3567..5051
DNA (1485bp) protein (495aa)
Uncharacterized protein n=7 Tax=Staphylococcus epidermidis RepID=C5QY12_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES35799.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
71_003_scaffold_59_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5501..6532
DNA (1032bp) protein (344aa)
ribD; riboflavin biosynthesis protein RibD (EC:3.5.4.26); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Riboflavin biosynthesis protein RibD n=14 Tax=Staphylococcus epidermidis RepID=H0DT32_STAEP
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
71_003_scaffold_59_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6539..7171
DNA (633bp) protein (211aa)
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:ESV19831.1}; EC=2.5.1.9 {ECO:0000313|EMBL:ESV19831.1};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9]
Riboflavin synthase, alpha subunit n=4 Tax=Staphylococcus epidermidis RepID=H0DT31_STAEP
71_003_scaffold_59_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7184..8365
DNA (1182bp) protein (394aa)
riboflavin biosynthesis protein; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
Riboflavin biosynthesis protein RibBA n=1 Tax=Staphylococcus epidermidis FRI909 RepID=E6JN07_STAEP
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
71_003_scaffold_59_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8378..8839
DNA (462bp) protein (154aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
ribH; 6,7-dimethyl-8-ribityllumazine synthase; K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
6,7-dimethyl-8-ribityllumazine synthase n=21 Tax=Staphylococcus epidermidis RepID=C5QY08_STAEP
71_003_scaffold_59_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8886..9887)
DNA (1002bp) protein (334aa)
putA; proline dehydrogenase (EC:1.5.99.8); K00318 proline dehydrogenase [EC:1.5.99.8]
Proline dehydrogenase n=17 Tax=Staphylococcus epidermidis RepID=C5QY07_STAEP
Proline dehydrogenase {ECO:0000313|EMBL:ESV19834.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
71_003_scaffold_59_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10130..10957
DNA (828bp) protein (276aa)
Uncharacterized protein n=8 Tax=Staphylococcus epidermidis RepID=C5QY06_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES35793.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
lysophospholipase
71_003_scaffold_59_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11439..11849
DNA (411bp) protein (137aa)
HTH-type transcriptional regulator rot n=13 Tax=Staphylococcus epidermidis RepID=C5QY05_STAEP
HTH-type transcriptional regulator rot {ECO:0000256|PIRNR:PIRNR032474}; Repressor of toxins {ECO:0000256|PIRNR:PIRNR032474}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
rot; repressor of toxins
71_003_scaffold_59_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12117..12680)
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Staphylococcus epidermidis RepID=J0NU63_STAEP
rRNA methyltransferase {ECO:0000313|EMBL:ESV19837.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
71_003_scaffold_59_15

Not on your lists

comp(12677..13630)
DNA (954bp) protein (318aa)
Radical SAM protein, TIGR01212 family n=1 Tax=Staphylococcus epidermidis NIHLM057 RepID=J0F4K8_STAEP
hypothetical protein; K07139
Radical SAM protein {ECO:0000313|EMBL:ETJ20585.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
71_003_scaffold_59_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13737..14951
DNA (1215bp) protein (405aa)
Major Facilitator Superfamily protein n=1 Tax=Staphylococcus epidermidis FRI909 RepID=E6JN00_STAEP
Transporter, major facilitator family protein {ECO:0000313|EMBL:EES35789.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
multidrug resistance protein-like protein
71_003_scaffold_59_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


15240..17657
DNA (2418bp) protein (806aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase n=1 Tax=Staphylococcus epidermidis W23144 RepID=C5QY01_STAEP
71_003_scaffold_59_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17683..17994
DNA (312bp) protein (104aa)
Rhodanese-like domain protein n=79 Tax=Staphylococcus epidermidis RepID=Q5HNF2_STAEQ
rhodanese-like domain-containing protein
Rhodanese-like protein {ECO:0000313|EMBL:EES35787.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_003_scaffold_59_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18399..29477
DNA (11079bp) protein (3693aa)
Gram-positive signal peptide protein, YSIRK family n=1 Tax=Staphylococcus epidermidis VCU118 RepID=H3V5Y9_STAEP
Cell wall surface anchor protein {ECO:0000313|EMBL:ESV19842.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
FmtB protein
71_003_scaffold_59_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29945..31207)
DNA (1263bp) protein (421aa)
Pyridine nucleotide-disulfide oxidoreductase family protein n=1 Tax=Staphylococcus epidermidis FRI909 RepID=E6JMZ6_STAEP
Flavoprotein family protein {ECO:0000313|EMBL:EES35927.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein; K07007
71_003_scaffold_59_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

31479..33140
DNA (1662bp) protein (554aa)
MatE family protein n=15 Tax=Staphylococcus epidermidis RepID=E6JMZ5_STAEP
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ESV19844.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
spore cortex protein-like protein
71_003_scaffold_59_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33137..33829
DNA (693bp) protein (231aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
16S pseudouridylate synthase; K06183 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
Pseudouridine synthase n=8 Tax=Staphylococcus epidermidis RepID=C5QXZ5_STAEP
71_003_scaffold_59_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33847..34275
DNA (429bp) protein (143aa)
Uncharacterized protein n=17 Tax=Staphylococcus epidermidis RepID=E6JMZ4_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ESV19846.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
71_003_scaffold_59_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

34578..35987
DNA (1410bp) protein (470aa)
dipeptidase PepV; K01439 succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Dipeptidase PepV n=15 Tax=Staphylococcus epidermidis RepID=H3V6J5_STAEP
Diguanylate cyclase {ECO:0000313|EMBL:ESV19847.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
71_003_scaffold_59_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

35991..36839
DNA (849bp) protein (283aa)
D-alanine aminotransferase {ECO:0000256|RuleBase:RU004520}; EC=2.6.1.21 {ECO:0000256|RuleBase:RU004520};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
dat; D-alanine aminotransferase (EC:2.6.1.21); K00824 D-alanine transaminase [EC:2.6.1.21]
D-alanine aminotransferase n=4 Tax=Staphylococcus epidermidis RepID=H0DT11_STAEP
71_003_scaffold_59_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

37169..38017
DNA (849bp) protein (283aa)
Phosphotransferase enzyme family n=1 Tax=Staphylococcus epidermidis W23144 RepID=C5QXZ1_STAEP
Phosphotransferase enzyme family {ECO:0000313|EMBL:EES35921.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
71_003_scaffold_59_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

38028..38678
DNA (651bp) protein (217aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33); K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
tRNA (guanine-N(7)-)-methyltransferase n=28 Tax=Staphylococcus epidermidis RepID=C5QXZ0_STAEP
71_003_scaffold_59_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(38838..39179)
DNA (342bp) protein (114aa)
Peptidase propeptide and YPEB domain protein n=8 Tax=Staphylococcus epidermidis RepID=C5QXY9_STAEP
Peptidase propeptide and YPEB domain protein {ECO:0000313|EMBL:EES35919.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
71_003_scaffold_59_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

39237..40322
DNA (1086bp) protein (362aa)
M42 glutamyl aminopeptidase {ECO:0000313|EMBL:EES35918.1}; EC=3.4.11.7 {ECO:0000313|EMBL:EES35918.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
M42 glutamyl aminopeptidase n=3 Tax=Staphylococcus epidermidis RepID=C5QXY8_STAEP
endo-1,4-beta-glucanase
71_003_scaffold_59_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

40328..40639
DNA (312bp) protein (104aa)
Thioredoxin n=25 Tax=Staphylococcus epidermidis RepID=S7NGB6_STAEP
Thioredoxin {ECO:0000313|EMBL:EES35917.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
thioredoxin-like protein
Displaying items 1-30 of 72 in total

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