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71_003_scaffold_87

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Displaying items 1-30 of 62 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_003_scaffold_87_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(640..1104)
DNA (465bp) protein (155aa)
Peroxide-responsive repressor PerR n=3 Tax=Staphylococcus epidermidis RepID=C5QU82_STAEP
Peroxide-responsive repressor PerR {ECO:0000313|EMBL:EES37146.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
FUR family transcriptional regulator; K09825 Fur family transcriptional regulator, peroxide stress response regulator
71_003_scaffold_87_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1188..2138)
DNA (951bp) protein (317aa)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein n=5 Tax=Staphylococcus epidermidis RepID=E6JQK3_STAEP
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:ESV19962.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
D-3-phosphoglycerate dehydrogenase
71_003_scaffold_87_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2141..2599)
DNA (459bp) protein (153aa)
bcp; bacterioferritin comigratory protein; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
AhpC/TSA family protein n=16 Tax=Staphylococcus epidermidis RepID=E6JQK4_STAEP
Thiol peroxidase {ECO:0000313|EMBL:ESV19963.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
71_003_scaffold_87_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2680..3969
DNA (1290bp) protein (430aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
Glutamate-1-semialdehyde 2,1-aminomutase n=3 Tax=Staphylococcus epidermidis RepID=C5QU85_STAEP
71_003_scaffold_87_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4276..5370
DNA (1095bp) protein (365aa)
Uncharacterized protein n=11 Tax=Staphylococcus epidermidis RepID=C5QU86_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES37150.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
71_003_scaffold_87_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5521..7257)
DNA (1737bp) protein (579aa)
ABC transporter permease/ATP-binding protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-]
ABC transporter, ATP-binding protein n=23 Tax=Staphylococcus epidermidis RepID=C5QU87_STAEP
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESV19966.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
71_003_scaffold_87_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7499..8041)
DNA (543bp) protein (181aa)
UPF0374 protein SERP1405 n=83 Tax=Staphylococcus epidermidis RepID=Y1405_STAEQ
hypothetical protein; K07586 hypothetical protein
UPF0374 protein HMPREF0791_0231 {ECO:0000256|HAMAP-Rule:MF_01568}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_003_scaffold_87_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8148..9218)
DNA (1071bp) protein (357aa)
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EES37153.1}; EC=3.2.2.- {ECO:0000313|EMBL:EES37153.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
mutY; A/G-specific adenine glycosylase (EC:3.2.2.-); K03575 A/G-specific adenine glycosylase [EC:3.2.2.-]
A/G-specific adenine glycosylase n=3 Tax=Staphylococcus epidermidis RepID=C5QU89_STAEP
71_003_scaffold_87_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9371..10345
DNA (975bp) protein (325aa)
YfhP n=13 Tax=Staphylococcus epidermidis RepID=E6JQL0_STAEP
Putative membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:EES37154.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein; K09151 hypothetical protein
71_003_scaffold_87_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10542..11357)
DNA (816bp) protein (272aa)
Uncharacterized protein n=12 Tax=Staphylococcus epidermidis RepID=C5QU91_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES37155.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein; K09692 teichoic acid transport system permease protein
71_003_scaffold_87_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11366..12883)
DNA (1518bp) protein (506aa)
teichoic acid translocation ATP-binding protein tagH; K09693 teichoic acid transport system ATP-binding protein [EC:3.6.3.40]
ABC transporter, ATP-binding protein n=16 Tax=Staphylococcus epidermidis RepID=C5QU92_STAEP
Teichoic acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESV19971.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
71_003_scaffold_87_12

Not on your lists

comp(12899..13213)
DNA (315bp) protein (105aa)
Uncharacterized protein n=75 Tax=Staphylococcus epidermidis RepID=Q8CRW0_STAES
hypothetical protein
Conserved protein YfhH {ECO:0000313|EMBL:ETJ21412.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
71_003_scaffold_87_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13206..14009)
DNA (804bp) protein (268aa)
Regulatory protein RecX n=17 Tax=Staphylococcus epidermidis RepID=C5QU94_STAEP
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
recX; recombination regulator RecX; K03565 regulatory protein
71_003_scaffold_87_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14288..15097)
DNA (810bp) protein (270aa)
Monofunctional glycosyltransferase {ECO:0000256|HAMAP-Rule:MF_01434}; Short=MGT {ECO:0000256|HAMAP-Rule:MF_01434};; EC=2.4.-.- {ECO:0000256|HAMAP-Rule:MF_01434};; Peptidoglycan TGase {ECO:0000256|HAMAP-Rule:MF_01434}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
glycosyltransferase; K04478 monofunctional glycosyltransferase [EC:2.4.1.-]
Monofunctional glycosyltransferase n=18 Tax=Staphylococcus epidermidis RepID=E6JQL4_STAEP
71_003_scaffold_87_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15421..15939)
DNA (519bp) protein (173aa)
hypothetical protein; K05520 protease I [EC:3.2.-.-]
Intracellular protease, PfpI family n=28 Tax=Staphylococcus epidermidis RepID=C5QU96_STAEP
General stress protein {ECO:0000313|EMBL:ESV19975.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
71_003_scaffold_87_16
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16239..16400)
DNA (162bp) protein (54aa)
Uncharacterized protein n=86 Tax=Staphylococcus RepID=L7WV60_STAWS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC90239.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
71_003_scaffold_87_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16559..17701
DNA (1143bp) protein (381aa)
YfkB-like domain protein n=15 Tax=Staphylococcus epidermidis RepID=C5QU98_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ESV19977.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
radical SAM domain-containing protein
71_003_scaffold_87_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17837..18367)
DNA (531bp) protein (177aa)
Thioesterase family protein n=28 Tax=Staphylococcus epidermidis RepID=C5QU99_STAEP
hypothetical protein
Thioesterase family protein {ECO:0000313|EMBL:EES37117.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_003_scaffold_87_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18448..19689)
DNA (1242bp) protein (414aa)
aminopeptidase; K01269 aminopeptidase [EC:3.4.11.-]
Aminopeptidase pepS n=5 Tax=Staphylococcus epidermidis RepID=E6JQL9_STAEP
Thermophilic metalloprotease (M29) {ECO:0000313|EMBL:EES37118.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_003_scaffold_87_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19691..19906)
DNA (216bp) protein (72aa)
UPF0435 protein SE_1565 n=77 Tax=Staphylococcus epidermidis RepID=Y1565_STAES
hypothetical protein
UPF0435 protein M464_0208985 {ECO:0000256|HAMAP-Rule:MF_00829}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
71_003_scaffold_87_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20048..20512
DNA (465bp) protein (155aa)
phosphotyrosine protein phosphatase (EC:3.1.3.48); K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
Low molecular weight protein-tyrosine-phosphatase PtpA; EC=3.1.3.48;; Phosphotyrosine phosphatase A; Short=PTPase A;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Low molecular weight phosphotyrosine phosphatase family protein n=2 Tax=Staphylococcus epidermidis RepID=E6JQM1_STAEP
71_003_scaffold_87_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20520..20804
DNA (285bp) protein (95aa)
Uncharacterized protein n=24 Tax=Staphylococcus epidermidis RepID=C5QUA3_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ESV19982.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
71_003_scaffold_87_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21210..22388
DNA (1179bp) protein (393aa)
YihY family protein n=1 Tax=Staphylococcus epidermidis FRI909 RepID=E6JQM3_STAEP
Ribonuclease BN {ECO:0000313|EMBL:ESV19983.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
ribonuclease BN; K07058 membrane protein
71_003_scaffold_87_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22445..23074)
DNA (630bp) protein (210aa)
Response regulator protein VraR n=12 Tax=Staphylococcus epidermidis RepID=H0DNU3_STAEP
Response regulator protein VraR {ECO:0000313|EMBL:EES37123.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
vraR; DNA-binding response regulator VraR; K07694 two-component system, NarL family, vancomycin resistance associated response regulator VraR
71_003_scaffold_87_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23064..24110)
DNA (1047bp) protein (349aa)
Sensor protein VraS {ECO:0000256|PIRNR:PIRNR037431}; EC=2.7.13.3 {ECO:0000256|PIRNR:PIRNR037431};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
two-component sensor histidine kinase; K07681 two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS [EC:2.7.13.3]
Sensor protein VraS n=23 Tax=Staphylococcus epidermidis RepID=C5QUA6_STAEP
71_003_scaffold_87_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24107..24808)
DNA (702bp) protein (234aa)
Uncharacterized protein n=26 Tax=Staphylococcus epidermidis RepID=C5QUA7_STAEP
Transporter {ECO:0000313|EMBL:ESV19986.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
71_003_scaffold_87_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24823..25209)
DNA (387bp) protein (129aa)
Uncharacterized protein n=5 Tax=Staphylococcus epidermidis RepID=J0EZA4_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ESV19987.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
71_003_scaffold_87_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25367..26122)
DNA (756bp) protein (252aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
map; methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18]
Methionine aminopeptidase n=26 Tax=Staphylococcus epidermidis RepID=C5QUA9_STAEP
71_003_scaffold_87_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26296..27282
DNA (987bp) protein (329aa)
Uncharacterized protein n=12 Tax=Staphylococcus epidermidis RepID=C5QUB0_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES37128.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
71_003_scaffold_87_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27434..27970)
DNA (537bp) protein (179aa)
Uncharacterized protein n=24 Tax=Staphylococcus epidermidis RepID=C5QUB1_STAEP
Uncharacterized protein {ECO:0000313|EMBL:ESV19990.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
Displaying items 1-30 of 62 in total

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