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71_003_scaffold_132

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_003_scaffold_132_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(114..1103)
DNA (990bp) protein (330aa)
Cell envelope-like function transcriptional attenuator common domain protein n=2 Tax=Staphylococcus epidermidis RepID=C5QWX4_STAEP
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:EES36089.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
transcriptional regulator
71_003_scaffold_132_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1239..1754
DNA (516bp) protein (172aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
msrA-1; methionine sulfoxide reductase A (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
Peptide methionine sulfoxide reductase MsrA n=16 Tax=Staphylococcus epidermidis RepID=C5QWX3_STAEP
71_003_scaffold_132_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1957..4479)
DNA (2523bp) protein (841aa)
fmtC; fmtC protein; K14205 phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
Uncharacterized protein n=3 Tax=Staphylococcus epidermidis RepID=C5QWX2_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES36087.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_003_scaffold_132_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4728..5945)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=55 Tax=Staphylococcus epidermidis RepID=Q5HPI2_STAEQ
hypothetical protein
Membrane protein {ECO:0000313|EMBL:ESV19382.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
71_003_scaffold_132_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6092..7093)
DNA (1002bp) protein (334aa)
PRD domain protein n=29 Tax=Staphylococcus epidermidis RepID=C5QWX0_STAEP
PRD domain protein {ECO:0000313|EMBL:EES36085.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
transcriptional antiterminator LicT; K03480 transcriptional antiterminator
71_003_scaffold_132_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7135..8592)
DNA (1458bp) protein (486aa)
Amino acid carrier protein n=5 Tax=Staphylococcus epidermidis RepID=C5QWW9_STAEP
Amino acid carrier protein {ECO:0000313|EMBL:EES36084.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
amino acid carrier protein; K03310 alanine or glycine:cation symporter, AGCS family
71_003_scaffold_132_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8804..11206)
DNA (2403bp) protein (801aa)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00937}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00937};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00937}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
parC; DNA topoisomerase IV subunit A (EC:5.99.1.-); K02621 topoisomerase IV subunit A [EC:5.99.1.-]
DNA topoisomerase 4 subunit A n=2 Tax=Staphylococcus epidermidis RepID=H3WKP8_STAEP
71_003_scaffold_132_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11203..13197)
DNA (1995bp) protein (665aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00939}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00939};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00939}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
DNA topoisomerase IV subunit B; K02622 topoisomerase IV subunit B [EC:5.99.1.-]
DNA topoisomerase 4 subunit B n=3 Tax=Staphylococcus epidermidis RepID=J0EDA6_STAEP
71_003_scaffold_132_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13407..14015
DNA (609bp) protein (203aa)
hypothetical protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15]
Glycerol-3-phosphate acyltransferase n=66 Tax=Staphylococcus epidermidis RepID=PLSY_STAEQ
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_003_scaffold_132_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14259..14555
DNA (297bp) protein (99aa)
HesB-like protein n=9 Tax=Staphylococcus epidermidis RepID=C5QWW5_STAEP
HesB-like protein {ECO:0000313|EMBL:EES36080.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
71_003_scaffold_132_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14604..15071)
DNA (468bp) protein (156aa)
thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Acyl-CoA thioester hydrolase, YbgC/YbaW family n=21 Tax=Staphylococcus epidermidis RepID=C5QWW4_STAEP
Acyl-CoA thioester hydrolase, YbgC/YbaW family {ECO:0000313|EMBL:EES36079.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_003_scaffold_132_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15194..17899)
DNA (2706bp) protein (902aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
aconitate hydratase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3]
Aconitate hydratase 1 n=18 Tax=Staphylococcus epidermidis RepID=C5QWW3_STAEP
71_003_scaffold_132_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18320..19960)
DNA (1641bp) protein (547aa)
Transporter, betaine/carnitine/choline family n=2 Tax=Staphylococcus epidermidis RepID=H0DU34_STAEP
Choline transporter {ECO:0000313|EMBL:ESV19374.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
glycine betaine transporter; K05020 glycine betaine transporter
71_003_scaffold_132_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20172..20522
DNA (351bp) protein (117aa)
Large-conductance mechanosensitive channel n=16 Tax=Staphylococcus epidermidis RepID=C5QWW1_STAEP
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
mscL; large-conductance mechanosensitive channel; K03282 large conductance mechanosensitive channel
71_003_scaffold_132_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20641..23670)
DNA (3030bp) protein (1010aa)
Exonuclease SbcCD, C subunit n=12 Tax=Staphylococcus epidermidis RepID=H0DU32_STAEP
Nuclease SbcCD subunit C {ECO:0000313|EMBL:ESV19372.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
sbcC; exonuclease SbcC; K03546 exonuclease SbcC
71_003_scaffold_132_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23674..24798)
DNA (1125bp) protein (375aa)
Exonuclease SbcCD, D subunit n=1 Tax=Staphylococcus epidermidis 14.1.R1.SE RepID=H0DU31_STAEP
Exonuclease D {ECO:0000313|EMBL:ESV19371.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
exonuclease SbcD; K03547 exonuclease SbcD
71_003_scaffold_132_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24906..25394)
DNA (489bp) protein (163aa)
Uncharacterized protein n=12 Tax=Staphylococcus epidermidis RepID=C5QWV8_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES36073.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
71_003_scaffold_132_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25607..25834)
DNA (228bp) protein (76aa)
UPF0154 protein SE_1026 n=83 Tax=Staphylococcus epidermidis RepID=Y1026_STAES
hypothetical protein; K09976 hypothetical protein
UPF0154 protein HMPREF0794_0649 {ECO:0000256|HAMAP-Rule:MF_00363}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
71_003_scaffold_132_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26041..28029)
DNA (1989bp) protein (663aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
tkt; transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1]
Transketolase n=18 Tax=Staphylococcus epidermidis RepID=C5QWV5_STAEP
71_003_scaffold_132_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28261..28497)
DNA (237bp) protein (79aa)
UPF0291 protein HMPREF0791_1147 n=8 Tax=Staphylococcus epidermidis RepID=C5QWV4_STAEP
UPF0291 protein HMPREF0791_1147 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
71_003_scaffold_132_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28655..28888)
DNA (234bp) protein (78aa)
Uncharacterized protein n=9 Tax=Staphylococcus epidermidis RepID=C5QWV3_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES36068.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
71_003_scaffold_132_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29032..29652
DNA (621bp) protein (207aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
lexA; LexA repressor (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88]
LexA repressor n=24 Tax=Staphylococcus epidermidis RepID=C5QWV2_STAEP
71_003_scaffold_132_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(30004..30945)
DNA (942bp) protein (314aa)
SCP-like protein n=19 Tax=Staphylococcus epidermidis RepID=C5QWV1_STAEP
Secretion protein {ECO:0000313|EMBL:ESV19364.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein
71_003_scaffold_132_24
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31043..32020)
DNA (978bp) protein (326aa)
GMP reductase {ECO:0000256|HAMAP-Rule:MF_01511, ECO:0000256|SAAS:SAAS00082324}; EC=1.7.1.7 {ECO:0000256|HAMAP-Rule:MF_01511, ECO:0000256|SAAS:SAAS00043008};; Guanosine 5'-monophosphate oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01511}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
guaC; guanosine 5'-monophosphate oxidoreductase (EC:1.7.1.7); K00364 GMP reductase [EC:1.7.1.7]
GMP reductase n=1 Tax=Staphylococcus epidermidis NIHLM040 RepID=J0G7A1_STAEP
71_003_scaffold_132_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(32174..32443)
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=81 Tax=Staphylococcus epidermidis RepID=RS14_STAEQ
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
71_003_scaffold_132_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32849..34363)
DNA (1515bp) protein (505aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
katA; catalase (EC:1.11.1.6); K03781 catalase [EC:1.11.1.6]
Catalase n=18 Tax=Staphylococcus epidermidis RepID=H0DWT4_STAEP
71_003_scaffold_132_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

34594..36042
DNA (1449bp) protein (483aa)
Amino acid permease family protein n=31 Tax=Staphylococcus epidermidis RepID=Q5HPK9_STAEQ
amino acid permease; K03293 amino acid transporter, AAT family
Amino acid permease {ECO:0000313|EMBL:EFE59373.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
71_003_scaffold_132_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

36348..36662
DNA (315bp) protein (105aa)
Uncharacterized protein n=26 Tax=Staphylococcus epidermidis RepID=C5QWU5_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES36060.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
71_003_scaffold_132_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(36989..37795)
DNA (807bp) protein (269aa)
Cof-like hydrolase n=9 Tax=Staphylococcus epidermidis RepID=H0DWT1_STAEP
HAD family hydrolase {ECO:0000313|EMBL:ESV19357.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
HAD superfamily hydrolase; K07024
71_003_scaffold_132_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(37858..38778)
DNA (921bp) protein (307aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
thrB; homoserine kinase (EC:2.7.1.39); K00872 homoserine kinase [EC:2.7.1.39]
Homoserine kinase n=3 Tax=Staphylococcus epidermidis RepID=C5QWU3_STAEP
Displaying items 1-30 of 35 in total

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