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71_003_scaffold_170

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Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_003_scaffold_170_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(182..1567)
DNA (1386bp) protein (462aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
fumC; fumarate hydratase (EC:4.2.1.2); K01679 fumarate hydratase, class II [EC:4.2.1.2]
Fumarate hydratase class II n=14 Tax=Staphylococcus epidermidis RepID=S7NF23_STAEP
71_003_scaffold_170_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1751..2155)
DNA (405bp) protein (135aa)
Uncharacterized protein n=9 Tax=Staphylococcus epidermidis RepID=C5QY56_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES35733.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
71_003_scaffold_170_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2328..2492)
DNA (165bp) protein (55aa)
Uncharacterized protein n=12 Tax=Staphylococcus epidermidis RepID=C5QY57_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES35734.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
71_003_scaffold_170_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2513..3112)
DNA (600bp) protein (200aa)
Glucosamine-6-phosphate isomerase family protein n=8 Tax=Staphylococcus epidermidis RepID=C5QY58_STAEP
Glucosamine-6-phosphate isomerase family protein {ECO:0000313|EMBL:EES35735.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
glucosamine-6-phosphate isomerase
71_003_scaffold_170_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3270..3740)
DNA (471bp) protein (157aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
RNA methyltransferase; K03216 tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
RNA methyltransferase n=26 Tax=Staphylococcus epidermidis RepID=V6QKC0_STAEP
71_003_scaffold_170_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3737..4867)
DNA (1131bp) protein (377aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Epoxyqueuosine reductase n=22 Tax=Staphylococcus epidermidis RepID=C5QY60_STAEP
hypothetical protein
71_003_scaffold_170_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5215..5943)
DNA (729bp) protein (243aa)
glutamate ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21]
Amino acid ABC transporter ATP-binding protein n=11 Tax=Staphylococcus epidermidis RepID=V4QR80_STAEP
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESV18599.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
71_003_scaffold_170_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5930..7387)
DNA (1458bp) protein (486aa)
ABC transporter, permease protein n=10 Tax=Staphylococcus epidermidis RepID=C5QY62_STAEP
ABC transporter, permease protein {ECO:0000313|EMBL:EES35739.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
amino acid ABC transporter substrate-binding protein; K02029 polar amino acid transport system permease protein
71_003_scaffold_170_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7627..8685)
DNA (1059bp) protein (353aa)
PTS system, IIC component n=1 Tax=Staphylococcus epidermidis NIHLM031 RepID=J0HEH4_STAEP
Phosphotransferase system, EIIC {ECO:0000313|EMBL:EES35740.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
PTS system, IIC component
71_003_scaffold_170_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8912..9760)
DNA (849bp) protein (283aa)
V8 protease; K01318 glutamyl endopeptidase [EC:3.4.21.19]
Trypsin family protein n=22 Tax=Staphylococcus epidermidis RepID=E6JN59_STAEP
Glutamyl endopeptidase {ECO:0000313|EMBL:ESV18602.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
71_003_scaffold_170_trna_10
unknown

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comp(10076..10159)
DNA (84bp)
transferRNA Leu
71_003_scaffold_170_trna_9
unknown

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comp(10203..10274)
DNA (72bp)
transferRNA Gly
71_003_scaffold_170_trna_8
unknown

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comp(10289..10360)
DNA (72bp)
transferRNA Gly
71_003_scaffold_170_trna_7
unknown

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comp(10377..10448)
DNA (72bp)
transferRNA Gly
71_003_scaffold_170_trna_6
unknown

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comp(10461..10531)
DNA (71bp)
transferRNA Cys
71_003_scaffold_170_trna_5
unknown

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comp(10537..10608)
DNA (72bp)
transferRNA Gln
71_003_scaffold_170_trna_4
unknown

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comp(10620..10692)
DNA (73bp)
transferRNA His
71_003_scaffold_170_trna_3
unknown

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comp(10706..10778)
DNA (73bp)
transferRNA Phe
71_003_scaffold_170_trna_2
unknown

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comp(10792..10864)
DNA (73bp)
transferRNA Asp
71_003_scaffold_170_trna_1
unknown

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comp(10879..10952)
DNA (74bp)
transferRNA Met
71_003_scaffold_170_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11267..11821)
DNA (555bp) protein (185aa)
Uncharacterized protein n=17 Tax=Staphylococcus epidermidis RepID=H0DRQ4_STAEP
Alpha/beta hydrolase {ECO:0000313|EMBL:ESV20412.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hypothetical protein; K07002
71_003_scaffold_170_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11957..13342)
DNA (1386bp) protein (462aa)
hemG; protoporphyrinogen oxidase (EC:1.3.3.4); K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4]
Protoporphyrinogen oxidase n=1 Tax=Staphylococcus epidermidis W23144 RepID=C5QY35_STAEP
Protoporphyrinogen oxidase {ECO:0000313|EMBL:ESV20411.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
71_003_scaffold_170_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13493..14416)
DNA (924bp) protein (308aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hemH; ferrochelatase (EC:4.99.1.1); K01772 ferrochelatase [EC:4.99.1.1]
Ferrochelatase n=8 Tax=Staphylococcus epidermidis RepID=C5QY36_STAEP
71_003_scaffold_170_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14493..15572)
DNA (1080bp) protein (360aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37]
Uroporphyrinogen decarboxylase n=13 Tax=Staphylococcus epidermidis RepID=V4Q1E9_STAEP
71_003_scaffold_170_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15846..16349
DNA (504bp) protein (168aa)
Antibiotic biosynthesis monooxygenase n=20 Tax=Staphylococcus epidermidis RepID=C5QY38_STAEP
Signal transduction protein TRAP {ECO:0000313|EMBL:ESV20408.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
RNAIII-activating protein TRAP
71_003_scaffold_170_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16785..17402)
DNA (618bp) protein (206aa)
Cadmium resistance transporter family protein n=18 Tax=Staphylococcus epidermidis RepID=C5QY39_STAEP
Cadmium transporter {ECO:0000313|EMBL:ESV20407.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
cadmium resistance family protein
71_003_scaffold_170_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17461..18708)
DNA (1248bp) protein (416aa)
Multidrug ABC transporter ATP-binding protein n=12 Tax=Staphylococcus epidermidis RepID=S7NH08_STAEP
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESV20406.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
ABC transporter permease; K01992 ABC-2 type transport system permease protein
71_003_scaffold_170_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18677..19417)
DNA (741bp) protein (247aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EES35828.1}; EC=3.6.3.25 {ECO:0000313|EMBL:EES35828.1};; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
ABC-type transporter ATP-binding protein ecsA n=6 Tax=Staphylococcus epidermidis RepID=E6JN39_STAEP
ABC transporter ecsA-like protein; K01990 ABC-2 type transport system ATP-binding protein
71_003_scaffold_170_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19547..19972
DNA (426bp) protein (142aa)
Histidine triad domain protein n=23 Tax=Staphylococcus epidermidis RepID=C5QY42_STAEP
Cell-cycle regulation protein HIT {ECO:0000313|EMBL:ESV20404.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
HIT family protein; K02503 Hit-like protein involved in cell-cycle regulation
71_003_scaffold_170_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20049..20420
DNA (372bp) protein (124aa)
Uncharacterized protein n=5 Tax=Staphylococcus epidermidis RepID=C5QY43_STAEP
Uncharacterized protein {ECO:0000313|EMBL:EES35830.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
hypothetical protein
Displaying items 1-30 of 42 in total

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