ggKbase home page

71_003_scaffold_160

Search features with annotation key words

Displaying items 1-30 of 34 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_003_scaffold_160_1
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

632..850
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium EnGen0174 RepID=R4C5T5_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EOM47374.1}; TaxID=1157469 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0174.;"
choline binding protein
71_003_scaffold_160_2
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1114..2274)
DNA (1161bp) protein (387aa)
Beta-lactamase n=6 Tax=Enterococcus faecium RepID=C2H8C6_ENTFC
Beta-lactamase {ECO:0000313|EMBL:EEI61389.1}; TaxID=525279 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium TX1330.;"
Beta-lactamase
71_003_scaffold_160_3
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2439..3614
DNA (1176bp) protein (392aa)
putative aminodeoxychorismate lyase (EC:4.1.3.38)
Aminodeoxychorismate lyase n=57 Tax=Firmicutes RepID=Q3XXY2_ENTFC
YceG family protein {ECO:0000313|EMBL:EJX39831.1}; TaxID=1134839 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium R501.;"
71_003_scaffold_160_4
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3750..4229
DNA (480bp) protein (160aa)
Transcription elongation factor GreA n=61 Tax=Firmicutes RepID=I3U0M1_ENTFC
greA; transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1244154 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium SD2A-2.;"
71_003_scaffold_160_5
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4368..5129
DNA (762bp) protein (254aa)
Uncharacterized protein n=53 Tax=Firmicutes RepID=Q3XXY4_ENTFC
Putative uncharacterized protein {ECO:0000313|EMBL:EEV43181.1}; TaxID=565656 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 1,230,933.;"
hypothetical protein
71_003_scaffold_160_6
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5126..6193
DNA (1068bp) protein (356aa)
sensor histidine kinase (EC:2.7.13.3)
Sensor histidine kinase {ECO:0000256|PIRNR:PIRNR037431}; EC=2.7.13.3 {ECO:0000256|PIRNR:PIRNR037431};; TaxID=1134823 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium ERV168.;"
Sensor histidine kinase n=56 Tax=Firmicutes RepID=H8L7C0_ENTFU
71_003_scaffold_160_7
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6200..6832
DNA (633bp) protein (211aa)
LuxR family DNA-binding response regulator n=63 Tax=Firmicutes RepID=H8L7B9_ENTFU
LuxR family DNA-binding response regulator; K11618 two-component system, NarL family, response regulator LiaR
LuxR family DNA-binding response regulator {ECO:0000313|EMBL:ELB38602.1}; TaxID=1138917 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0026.;"
71_003_scaffold_160_8
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6972..7637
DNA (666bp) protein (222aa)
TrkA N-terminal domain protein n=19 Tax=Enterococcus faecium RepID=C2H8D3_ENTFC
Potassium transporter Trk {ECO:0000313|EMBL:KEI53688.1}; TaxID=1400822 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium UC8668.;"
TrkA-C domain-containing protein; K03499 trk system potassium uptake protein TrkA
71_003_scaffold_160_9
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7654..7947
DNA (294bp) protein (98aa)
HesB/YadR/YfhF-family protein n=9 Tax=Enterococcus faecium RepID=D4QN39_ENTFC
Putative uncharacterized protein {ECO:0000313|EMBL:EEV61998.1}; TaxID=565663 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium Com15.;"
HesB-like domain protein
71_003_scaffold_160_10
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8007..8954)
DNA (948bp) protein (316aa)
D-isomer specific 2-hydroxyacid dehydrogenase n=4 Tax=Enterococcus faecium RepID=C9APQ7_ENTFC
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:ELB58521.1}; TaxID=1138926 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0047.;"
D-3-phosphoglycerate dehydrogenase
71_003_scaffold_160_11
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9173..9976)
DNA (804bp) protein (268aa)
Uncharacterized protein n=9 Tax=Enterococcus RepID=C2H8D6_ENTFC
Putative uncharacterized protein {ECO:0000313|EMBL:EEV51539.1}; TaxID=565659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 1,141,733.;"
hypothetical protein
71_003_scaffold_160_12
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10137..10895
DNA (759bp) protein (253aa)
Cation diffusion facilitator family transporter n=8 Tax=Enterococcus faecium RepID=C2H8D7_ENTFC
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EEI61400.1}; TaxID=525279 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium TX1330.;"
cation diffusion facilitator family transporter; K03295 cation efflux system protein, CDF family
71_003_scaffold_160_13
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11083..11553
DNA (471bp) protein (157aa)
GtrA-like protein n=13 Tax=Enterococcus faecium RepID=C2H8D8_ENTFC
Cell wall teichoic acid glycosylation protein GtcA family protein {ECO:0000313|EMBL:ELB58524.1}; TaxID=1138926 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0047.;"
Teichoic acid glycosylation protein
71_003_scaffold_160_14
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11638..12246
DNA (609bp) protein (203aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=565659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 1,141,733.;"
sodA; superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase n=9 Tax=Enterococcus faecium RepID=C2H8D9_ENTFC
71_003_scaffold_160_15
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12380..12580
DNA (201bp) protein (67aa)
Major cold shock protein CspA n=236 Tax=Firmicutes RepID=H8L7B1_ENTFU
cspA; cold shock protein Csp
Cold shock-like protein CspD {ECO:0000313|EMBL:EOH38923.1}; TaxID=1157480 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0185.;"
71_003_scaffold_160_16
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12630..14078)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=19 Tax=Enterococcus RepID=L2NJM9_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:KEI53696.1}; TaxID=1400822 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium UC8668.;"
hypothetical protein
71_003_scaffold_160_17
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14616..16502
DNA (1887bp) protein (629aa)
Predicted protein n=1 Tax=Enterococcus faecium 1,141,733 RepID=C9BGW9_ENTFC
Predicted protein {ECO:0000313|EMBL:EEV51546.1}; TaxID=565659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 1,141,733.;"
cell wall-associated protease
71_003_scaffold_160_18
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16611..16925
DNA (315bp) protein (105aa)
Uncharacterized protein n=7 Tax=Enterococcus faecium RepID=C2H8E5_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ELB54412.1}; TaxID=1138924 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0056.;"
hypothetical protein
71_003_scaffold_160_19
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17063..18289
DNA (1227bp) protein (409aa)
Uncharacterized protein n=5 Tax=Enterococcus faecium RepID=J8WJ22_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EFF60832.1}; TaxID=791161 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium PC4.1.;"
hypothetical protein
71_003_scaffold_160_20
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18295..18534
DNA (240bp) protein (80aa)
Uncharacterized protein n=9 Tax=Enterococcus faecium RepID=C2H8E7_ENTFC
Putative uncharacterized protein {ECO:0000313|EMBL:EEV60047.1}; TaxID=565662 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium Com12.;"
71_003_scaffold_160_21
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18573..20063
DNA (1491bp) protein (497aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=565659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 1,141,733.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=4 Tax=Enterococcus faecium RepID=C2H8E8_ENTFC
hypothetical protein
71_003_scaffold_160_22
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20421..21647
DNA (1227bp) protein (409aa)
Transcriptional regulator n=1 Tax=Enterococcus faecium EnGen0038 RepID=L2QED5_ENTFC
Putative transcriptional regulator {ECO:0000313|EMBL:EFF60829.1}; TaxID=791161 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium PC4.1.;"
Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr
71_003_scaffold_160_23
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21766..22236)
DNA (471bp) protein (157aa)
TspO/MBR family protein n=12 Tax=Enterococcus RepID=C2H8F1_ENTFC
Tryptophan-rich sensory protein {ECO:0000313|EMBL:EEV61983.1}; TaxID=565663 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium Com15.;"
tspO protein, putative
71_003_scaffold_160_24
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22513..24060
DNA (1548bp) protein (516aa)
Endochitinase n=8 Tax=Enterococcus faecium RepID=C9BGX6_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ELB04266.1}; TaxID=1138901 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0003.;"
chitinase B
71_003_scaffold_160_25
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24218..24796
DNA (579bp) protein (193aa)
Chitin binding domain protein n=7 Tax=Enterococcus faecium RepID=C2H8F3_ENTFC
Chitin-binding protein {ECO:0000313|EMBL:EEV51554.1}; TaxID=565659 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 1,141,733.;"
Chitin binding protein
71_003_scaffold_160_26
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24968..26350)
DNA (1383bp) protein (461aa)
trmA; TrmA family tRNA (uracil-5-)-methyltransferase (EC:2.1.1.35)
tRNA (Uracil-5-)-methyltransferase/TrmA n=5 Tax=Enterococcus faecium RepID=C9BGX8_ENTFC
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EJV55231.1}; TaxID=1134802 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium TX1337RF.;"
71_003_scaffold_160_27
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26457..27254
DNA (798bp) protein (266aa)
Regulatory protein RecX n=9 Tax=Enterococcus faecium RepID=C2H8F5_ENTFC
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1138926 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0047.;"
regulatory protein RecX
71_003_scaffold_160_28
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27247..28425
DNA (1179bp) protein (393aa)
A/G-specific adenine glycosylase (EC:3.2.2.-); K03575 A/G-specific adenine glycosylase [EC:3.2.2.-]
A/G-specific adenine glycosylase n=8 Tax=Enterococcus faecium RepID=C2H8F6_ENTFC
A/G-specific adenine glycosylase {ECO:0000313|EMBL:ELB04261.1}; TaxID=1138901 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0003.;"
71_003_scaffold_160_29
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28519..29052
DNA (534bp) protein (178aa)
UPF0374 protein HMPREF0352_0489 n=13 Tax=Enterococcus faecium RepID=C2H8F7_ENTFC
UPF0374 protein OKA_05122 {ECO:0000256|HAMAP-Rule:MF_01568}; TaxID=1138917 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0026.;"
hypothetical protein; K07586 hypothetical protein
71_003_scaffold_160_30
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29124..29558)
DNA (435bp) protein (145aa)
GNAT family acetyltransferase (EC:2.3.1.-)
Acetyltransferase n=6 Tax=Enterococcus faecium RepID=C9BGY2_ENTFC
GNAT family acetyltransferase {ECO:0000313|EMBL:ELB58186.1}; TaxID=1138926 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0047.;"
Displaying items 1-30 of 34 in total

View Taxonomy