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71_003_scaffold_2

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Displaying items 1-30 of 287 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_003_scaffold_2_1
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

418..1341
DNA (924bp) protein (308aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NVX3_9FIRM
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32044.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_003_scaffold_2_2
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1295..1741
DNA (447bp) protein (149aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32043.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_003_scaffold_2_3
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1738..2742
DNA (1005bp) protein (335aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32043.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_003_scaffold_2_4
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2840..3142
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:KFI94734.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
71_003_scaffold_2_5
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3353..3898
DNA (546bp) protein (182aa)
Transcriptional regulator n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WGL9_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32041.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
slyA; transcriptional regulator
71_003_scaffold_2_6
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3895..5874
DNA (1980bp) protein (660aa)
ABC transporter ATP-binding component n=2 Tax=Bifidobacterium longum RepID=E8MV92_BIFL1
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32040.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ABC transporter ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial
71_003_scaffold_2_7
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5871..7886
DNA (2016bp) protein (672aa)
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:KFI94737.1}; EC=3.6.3.42 {ECO:0000313|EMBL:KFI94737.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
ABC transporter ATP-binding protein (EC:3.6.3.42); K06147 ATP-binding cassette, subfamily B, bacterial
ATP-binding protein of ABC transporter system n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6H9Z1_9BIFI
71_003_scaffold_2_8
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8166..8876
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Metascardovia criceti RepID=UPI00035E851B
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32038.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_003_scaffold_2_9
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9182..10192
DNA (1011bp) protein (337aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EBQ5_BIFLI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32037.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
LacI-type transcriptional regulator; K02529 LacI family transcriptional regulator
71_003_scaffold_2_10
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10250..13549)
DNA (3300bp) protein (1100aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Beta-galactosidase; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
beta-galactosidase; K01190 beta-galactosidase [EC:3.2.1.23]
Beta galactosidase small chain n=2 Tax=Bifidobacterium longum subsp. longum RepID=C2GVR1_BIFLN
71_003_scaffold_2_11
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13915..15459
DNA (1545bp) protein (515aa)
Glycoside/pentoside/hexuronide transporter n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GVR2_BIFLN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32035.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
melB1; melb1
71_003_scaffold_2_12
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15693..16703
DNA (1011bp) protein (337aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPL4_BIFLS
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:KFI94742.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
transcriptional regulator
71_003_scaffold_2_13
Bifidobacterium pullorum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16953..17372
DNA (420bp) protein (140aa)
Acetyltransferase, GNAT family n=1 Tax=Bifidobacterium breve DSM 20213 = JCM 1192 RepID=D4BR99_BIFBR
Acetyltransferase, GNAT family {ECO:0000313|EMBL:KFI84000.1}; TaxID=78448 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pullorum.;"
hypothetical protein
71_003_scaffold_2_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17446..18366
DNA (921bp) protein (307aa)
ribonucleoside hydrolase; K12700 non-specific riboncleoside hydrolase [EC:3.2.-.-]
Ribonucleoside hydrolase n=5 Tax=Bifidobacterium RepID=E8MEN1_BIFL2
Ribonucleoside hydrolase {ECO:0000313|EMBL:KEY21614.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
71_003_scaffold_2_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18455..19885
DNA (1431bp) protein (477aa)
C4-dicarboxylate transporter n=4 Tax=Bifidobacterium RepID=Q8G3I8_BIFLO
dcuC; C4-dicarboxylate transporter; K03326 C4-dicarboxylate transporter, DcuC family
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KEY21615.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
71_003_scaffold_2_16
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19934..20911
DNA (978bp) protein (326aa)
PfkB domain-containing protein; K00852 ribokinase [EC:2.7.1.15]
Putative ribokinase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BUS3_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32027.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_003_scaffold_2_17
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21016..22281)
DNA (1266bp) protein (422aa)
amidohydrolase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI0002899219
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32026.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_003_scaffold_2_18
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22466..23254)
DNA (789bp) protein (263aa)
ABC transporter permease n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00036935CA
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32025.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ABC transporter permease
71_003_scaffold_2_19
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23251..24024)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037649D7
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32024.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ABC transporter permease
71_003_scaffold_2_20
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24031..24855)
DNA (825bp) protein (275aa)
Nitrate ABC transporter ATPase {ECO:0000313|EMBL:KFI94752.1}; EC=3.6.3.36 {ECO:0000313|EMBL:KFI94752.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
ABC transporter related protein n=1 Tax=Frankia sp. EUN1f RepID=D3D3S3_9ACTO
ABC transporter ATP-binding protein
71_003_scaffold_2_21
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24852..25913)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036B49C2
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32022.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ABC transporter substrate-binding protein
71_003_scaffold_2_22
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26535..27548
DNA (1014bp) protein (338aa)
Inosine/uridine-preferring nucleoside hydrolase {ECO:0000313|EMBL:KFI94754.1}; EC=3.2.2.3 {ECO:0000313|EMBL:KFI94754.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Inosine/uridine-preferring nucleoside hydrolase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GUC8_BIFLS
putative nucleoside hydrolase
71_003_scaffold_2_23
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27700..29103
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NQA7_9BIFI
MFS superfamily transporter {ECO:0000313|EMBL:KFI94755.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
MFS superfamily transporter
71_003_scaffold_2_24
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29143..30123
DNA (981bp) protein (327aa)
Sugar kinase n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=E8MQG3_BIFLS
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32019.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
sugar kinase
71_003_scaffold_2_25
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30638..33961
DNA (3324bp) protein (1108aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
Isoleucine--tRNA ligase n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XW36_9BIFI
71_003_scaffold_2_26
unknown

Not on your lists

34383..34589
DNA (207bp) protein (69aa)

This feature has no annotations

71_003_scaffold_2_27
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34910..36364
DNA (1455bp) protein (485aa)
Amino acid permease n=2 Tax=Bifidobacterium dentium RepID=D2QAY1_BIFDB
Amino acid permease {ECO:0000313|EMBL:KFI94758.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
amino acid permease
71_003_scaffold_2_28
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36393..37199
DNA (807bp) protein (269aa)
Short chain dehydrogenase {ECO:0000313|EMBL:KFI94759.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KFI94759.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
fabG; 3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.268); K00540 [EC:1.-.-.-]
FabG 3-oxoacyl-[acyl-carrier protein] reductase n=4 Tax=Bifidobacterium dentium RepID=D2QAY0_BIFDB
71_003_scaffold_2_29
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37403..37891)
DNA (489bp) protein (163aa)
Thioredoxin-dependent thiol peroxidase {ECO:0000313|EMBL:KFI97512.1}; EC=1.11.1.15 {ECO:0000313|EMBL:KFI97512.1};; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
thioredoxin peroxidase (EC:1.11.1.15); K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Putative peroxiredoxin n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFT7_BIFBI
71_003_scaffold_2_30
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38437..38853
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A2K8_BIFAA
Uncharacterized protein {ECO:0000313|EMBL:KFI94769.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
Displaying items 1-30 of 287 in total

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