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71_003_scaffold_98

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Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_003_scaffold_98_1
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..99)
DNA (99bp) protein (33aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FDA3_9BIFI
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:KFI90128.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
oligosaccharide ABC transporter permease; K02025 multiple sugar transport system permease protein
71_003_scaffold_98_2
Bifidobacterium saguini, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(470..1507)
DNA (1038bp) protein (346aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium dentium RepID=D2Q7F7_BIFDB
Transcriptional regulator, LacI family {ECO:0000313|EMBL:KFI94095.1}; TaxID=1437607 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saguini DSM 23967.;"
LacI family transcriptional regulator
71_003_scaffold_98_3
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1731..1988
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000362F030
ATPase {ECO:0000313|EMBL:KFI95702.1}; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
Predicted ATPase (AAA+ superfamily)
71_003_scaffold_98_4
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2132..3397
DNA (1266bp) protein (422aa)
ROK family protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWX4_BIFLJ
ROK family protein {ECO:0000313|EMBL:KJY63916.1}; TaxID=1684 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides.;"
ROK family protein
71_003_scaffold_98_5
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3496..6516)
DNA (3021bp) protein (1007aa)
family 38 glycoside hydrolase; K01191 alpha-mannosidase [EC:3.2.1.24]
Glycoside hydrolase, family 38 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWX5_BIFLJ
Glycoside hydrolase, family 38 {ECO:0000313|EMBL:KJY63917.1}; TaxID=1684 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides.;"
71_003_scaffold_98_6
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6605..7513)
DNA (909bp) protein (303aa)
sugar ABC transporter permease n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI0002880C6C
Putative sugar ABC transporter, permease component {ECO:0000313|EMBL:KJY63918.1}; TaxID=1684 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides.;"
putative sugar ABC transporter permease; K02026 multiple sugar transport system permease protein
71_003_scaffold_98_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7506..7877)
DNA (372bp) protein (124aa)
ABC superfamily ATP binding cassette transporter, membrane protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWX6_BIFLJ
ABC transporter membrane protein; K02025 multiple sugar transport system permease protein
ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:ADH01382.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
71_003_scaffold_98_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7896..8384)
DNA (489bp) protein (163aa)
ABC superfamily ATP binding cassette transporter, membrane protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWX6_BIFLJ
ABC transporter membrane protein; K02025 multiple sugar transport system permease protein
ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:ADH01382.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
71_003_scaffold_98_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8498..9868)
DNA (1371bp) protein (457aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZWX7_BIFLJ
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
Extracellular solute-binding protein, family 1 {ECO:0000313|EMBL:ADH01383.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
71_003_scaffold_98_10
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10338..11021)
DNA (684bp) protein (228aa)
haloacid dehalogenase (EC:3.1.3.18)
HAD hydrolase, family IA, variant 3 n=2 Tax=Bifidobacterium dentium RepID=E0QA86_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32548.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_003_scaffold_98_11
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11219..11773)
DNA (555bp) protein (185aa)
Heat shock regulatory protein hspR n=5 Tax=Bifidobacterium RepID=E3ERD6_BIFBS
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32549.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hspR; putative heat shock protein
71_003_scaffold_98_12
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11944..12975)
DNA (1032bp) protein (344aa)
DnaJ domain protein n=3 Tax=Bifidobacterium dentium RepID=E0QA83_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32550.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
dnaJ1; molecular chaperone DnaJ; K03686 molecular chaperone DnaJ
71_003_scaffold_98_13
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13060..13743)
DNA (684bp) protein (228aa)
Protein GrpE n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GCZ1_9BIFI
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
grpE; chaperone
71_003_scaffold_98_14
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13746..15629)
DNA (1884bp) protein (628aa)
Chaperone protein DnaK n=7 Tax=Bifidobacterium RepID=A7A9B6_BIFAD
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
dnaK; chaperone protein dnaK; K04043 molecular chaperone DnaK
71_003_scaffold_98_15
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15982..18081)
DNA (2100bp) protein (700aa)
Alkaline phosphatase {ECO:0000313|EMBL:KFI90104.1}; EC=3.1.3.1 {ECO:0000313|EMBL:KFI90104.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
alkaline phosphatase; K01077 alkaline phosphatase [EC:3.1.3.1]
Alkaline phosphatase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6HB38_9BIFI
71_003_scaffold_98_16
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18756..19766
DNA (1011bp) protein (337aa)
Regulatory protein LacI n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RHC8_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32554.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
regulatory protein LacI
71_003_scaffold_98_17
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20273..21646
DNA (1374bp) protein (458aa)
ABC transporter, solute-binding protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BVB8_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32556.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
ABC transporter substrate-binding protein
71_003_scaffold_98_18
Bifidobacterium psychraerophilum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21681..23429
DNA (1749bp) protein (583aa)
Alpha-1,4-glucosidase {ECO:0000313|EMBL:KFI83389.1}; EC=3.2.1.20 {ECO:0000313|EMBL:KFI83389.1};; TaxID=218140 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium psychraerophilum.;"
Alpha-1,4-glucosidase n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RAD1_9BIFI
alpha-1,4-glucosidase
71_003_scaffold_98_19
Bifidobacterium callitrichos, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23491..24375)
DNA (885bp) protein (295aa)
ATPase n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WK78_EGGLE
ATPase {ECO:0000313|EMBL:KFI54216.1}; TaxID=1437609 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium callitrichos DSM 23973.;"
ATPase; K06921
71_003_scaffold_98_20
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25053..26078
DNA (1026bp) protein (342aa)
Transcriptional regulator, LacI family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A9C9_BIFAD
LacI family transcriptional regulator {ECO:0000313|EMBL:KFI85096.1}; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reuteri DSM 23975.;"
LacI-type transcriptional regulator
71_003_scaffold_98_21
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26198..27556)
DNA (1359bp) protein (453aa)
Possible solute binding protein of ABC transporter n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A220_BIFAA
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFI90108.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
ABC transporter substrate-binding protein
71_003_scaffold_98_22
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27849..28865
DNA (1017bp) protein (339aa)
Regulatory protein, LacI n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXG5_BIFLJ
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32561.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
regulatory protein LacI
71_003_scaffold_98_23
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29022..30389)
DNA (1368bp) protein (456aa)
Possible solute binding protein of ABC transporter n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A220_BIFAA
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFI90110.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
ABC transporter substrate-binding protein
71_003_scaffold_98_24
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30805..31830
DNA (1026bp) protein (342aa)
Regulatory protein, LacI n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXG5_BIFLJ
Regulatory protein LacI {ECO:0000313|EMBL:KFI90111.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
regulatory protein LacI
71_003_scaffold_98_25
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31876..33606)
DNA (1731bp) protein (577aa)
Alpha-amylase {ECO:0000313|EMBL:KFI90112.1}; EC=3.2.1.1 {ECO:0000313|EMBL:KFI90112.1};; EC=5.4.99.16 {ECO:0000313|EMBL:KFI90112.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
agl3; alpha-glucosidase (EC:3.2.1.54); K05343 maltose alpha-D-glucosyltransferase [EC:5.4.99.16]
Oligo-1,6-glucosidase 1 n=2 Tax=Bifidobacterium dentium RepID=E0QA60_9BIFI
71_003_scaffold_98_26
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33872..35131
DNA (1260bp) protein (420aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXF9_BIFLJ
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:KFI90113.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
family 1 extracellular solute-binding protein; K10108 maltose/maltodextrin transport system substrate-binding protein
71_003_scaffold_98_27
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35159..36559
DNA (1401bp) protein (467aa)
Putative sugar ABC transport system membrane protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXG0_BIFLJ
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32567.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
putative sugar ABC transport system membrane protein; K10109 maltose/maltodextrin transport system permease protein
71_003_scaffold_98_28
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36556..37476
DNA (921bp) protein (307aa)
Maltose/maltodextrin ABC superfamily ATP binding cassette transporter n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXG1_BIFLJ
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32568.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
maltose/maltodextrin ABC transporter; K10110 maltose/maltodextrin transport system permease protein
71_003_scaffold_98_29
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37575..39608
DNA (2034bp) protein (678aa)
glycogen debranching protein GlgX; K01200 pullulanase [EC:3.2.1.41]
Glycogen debranching enzyme GlgX n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXG2_BIFLJ
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32569.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_003_scaffold_98_30
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39677..40420
DNA (744bp) protein (248aa)
ABC transporter permease n=1 Tax=Bifidobacterium minimum RepID=UPI0003B5227F
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32570.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
putative ABC transport system membrane protein
Displaying items 1-30 of 40 in total

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