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71_003_scaffold_250

Search features with annotation key words

Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_003_scaffold_250_1
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..258
DNA (258bp) protein (86aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31097.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_003_scaffold_250_2
unknown

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comp(255..515)
DNA (261bp) protein (87aa)

This feature has no annotations

71_003_scaffold_250_3
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

696..2846
DNA (2151bp) protein (717aa)
Uncharacterized protein n=1 Tax=Amphimedon queenslandica RepID=I1EM42_AMPQE
Uncharacterized protein {ECO:0000313|EMBL:KFI95346.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
71_003_scaffold_250_4
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3101..5743)
DNA (2643bp) protein (881aa)
Negative regulator of genetic competence clpC/mecB n=5 Tax=Bifidobacterium breve RepID=F9Y267_BIFBU
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31095.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
clpC; Negative regulator of genetic competence clpC/mecB
71_003_scaffold_250_5
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5886..6863
DNA (978bp) protein (326aa)
UspA domain protein n=3 Tax=Bifidobacterium dentium RepID=D2Q9F4_BIFDB
UspA domain-containing protein {ECO:0000313|EMBL:KFI95348.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
uspA; UspA domain protein
71_003_scaffold_250_6
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7002..8021)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GBE9_9BIFI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31093.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_003_scaffold_250_7
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8027..8416)
DNA (390bp) protein (130aa)
Cold-shock DNA-binding domain protein n=3 Tax=Bifidobacterium RepID=B6XX10_9BIFI
Cold-shock protein {ECO:0000313|EMBL:KFI95350.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
cspB; cold shock protein CspB; K03704 cold shock protein (beta-ribbon, CspA family)
71_003_scaffold_250_8
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8497..10419)
DNA (1923bp) protein (641aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
two component system histidine kinase (EC:2.7.13.3); K02484 two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S657_9BIFI
71_003_scaffold_250_9
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10416..11171)
DNA (756bp) protein (252aa)
Response regulator receiver domain protein n=5 Tax=Bifidobacterium breve RepID=F6C7X1_BIFBA
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31090.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
Two-component response regulator
71_003_scaffold_250_10
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11212..12090)
DNA (879bp) protein (293aa)
Conserved hypothetical membrane spanning protein n=2 Tax=Bifidobacterium breve RepID=F9Y273_BIFBU
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31089.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
Conserved hypothetical membrane spanning protein
71_003_scaffold_250_11
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12262..12552
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L248_BIFBR
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
type VII secretion target protein
71_003_scaffold_250_12
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12685..12951
DNA (267bp) protein (89aa)
Killer protein n=2 Tax=Gardnerella vaginalis RepID=I4M1K9_GARVA
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31087.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
higB; toxin HigB-1; K07334 proteic killer suppression protein
71_003_scaffold_250_13
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12923..13240
DNA (318bp) protein (106aa)
Plasmid maintenance system antidote protein n=2 Tax=Gardnerella vaginalis RepID=I4M1K8_GARVA
Plasmid maintenance system antidote protein {ECO:0000313|EMBL:KFI95356.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
higA; addiction module antidote protein HigA
71_003_scaffold_250_14
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13428..14189
DNA (762bp) protein (254aa)
von Willebrand factor type A domain protein n=1 Tax=Corynebacterium matruchotii ATCC 33806 RepID=C0E689_9CORY
Uncharacterized protein {ECO:0000313|EMBL:KFI95357.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
71_003_scaffold_250_15
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14327..16018
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Corynebacterium matruchotii ATCC 14266 RepID=E0DEM2_9CORY
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31084.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
similar to CG16995 CG16995-PA
71_003_scaffold_250_16
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16009..17070
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Corynebacterium matruchotii ATCC 33806 RepID=C0E687_9CORY
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31083.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_003_scaffold_250_17
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17067..17237
DNA (171bp) protein (57aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31082.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
Displaying 17 items

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