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71_003_scaffold_286

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_003_scaffold_286_1
Bifidobacterium animalis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..93)
DNA (93bp) protein (31aa)
L-ribulose-5-phosphate 4-epimerase (EC:5.1.3.4)
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:AFI62297.1}; EC=5.1.3.4 {ECO:0000313|EMBL:AFI62297.1};; TaxID=703613 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium animalis subsp. animalis (strain ATCC 25527 / DSM; 20104 / JCM 1190 / R101-8).;"
L-ribulose-5-phosphate 4-epimerase n=14 Tax=Bifidobacterium animalis RepID=D3R7J7_BIFAB
71_003_scaffold_286_2
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(178..1824)
DNA (1647bp) protein (549aa)
Sugar (Pentulose and hexulose) kinases n=9 Tax=Bifidobacterium longum RepID=D6D9Y2_BIFLN
ATPase {ECO:0000313|EMBL:KFI89956.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
sugar kinase
71_003_scaffold_286_3
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2032..3147)
DNA (1116bp) protein (372aa)
Lactose operon repressor n=3 Tax=Bifidobacterium bifidum RepID=I3WGD4_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32223.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
lacI; lactose operon repressor
71_003_scaffold_286_4
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3255..4010)
DNA (756bp) protein (252aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RAY9_9BIFI
71_003_scaffold_286_5
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4095..4874)
DNA (780bp) protein (260aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89]
LepB Signal peptidase I n=2 Tax=Bifidobacterium dentium RepID=D2Q880_BIFDB
71_003_scaffold_286_6
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(5059..5424)
DNA (366bp) protein (122aa)
50S ribosomal protein L19 n=3 Tax=Bifidobacterium breve RepID=F6C7H1_BIFBA
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
rplS; LSU ribosomal protein L19P
71_003_scaffold_286_7
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5758..6186)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EAE6_9CLOT
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32227.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
Domain of unknown function (DUF1893).
71_003_scaffold_286_8
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6194..6772)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H413_9FIRM
Membrane protein {ECO:0000313|EMBL:KFI89962.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
71_003_scaffold_286_9
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6810..7709)
DNA (900bp) protein (300aa)
Tat (Twin-arginine translocation) pathway signal sequence n=2 Tax=Parabacteroides RepID=N2ALK2_9PORP
Tat (Twin-arginine translocation) pathway signal sequence {ECO:0000313|EMBL:KFI89963.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
Uncharacterized Fe-S center protein
71_003_scaffold_286_10
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8417..10192
DNA (1776bp) protein (592aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C7H0_BIFBA
ABC transporter permease {ECO:0000313|EMBL:KFI89964.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
ABC transporter permease; K02050 NitT/TauT family transport system permease protein
71_003_scaffold_286_11
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10245..11690
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S3A3D4_BIFBR
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ32231.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
nitrate/sulfonate/bicarbonate ABC transporter ATPase; K02049 NitT/TauT family transport system ATP-binding protein
71_003_scaffold_286_12
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11691..12758)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=5 Tax=Bifidobacterium bifidum RepID=I3WGB9_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:KFI89966.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
71_003_scaffold_286_13
unknown

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13008..13082
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 13 items

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