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71_003_scaffold_6_19

Organism: 71_003_Bifidobacterium_scardovii_65_254

near complete RP 52 / 55 MC: 7 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 19201..19479

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2USV6_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 35.2
  • Coverage: 88.0
  • Bit_score: 64
  • Evalue 6.70e-08
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31065.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 92.0
  • Bit_score: 183
  • Evalue 1.80e-43
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.6
  • Coverage: 86.0
  • Bit_score: 61
  • Evalue 1.40e-07

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Taxonomy

Bifidobacterium scardovii → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 279
ATGCCTACGGAACGATTTGACGATATGTTCGACGATGCCGTGAAGGATCCCCGGATGGCGGAGCTCATCCATGACTGCATGGCGCAGATGACCATCGGCATGCAGCTGGCCGAGGCCCGCGCGGACTCCGGCATGAGCATGGACGCGCTGGCCCGGCGGAGCGGCGTGGCGAAGACCACGATCCTCAACATCGAGCATGGCGACGCATCGCCCACCATCGCCACGCTGACCAAGCTCGCCGACGCCATGGGCAAGCGGCTGCAGACCGCATTCGTGTGA
PROTEIN sequence
Length: 93
MPTERFDDMFDDAVKDPRMAELIHDCMAQMTIGMQLAEARADSGMSMDALARRSGVAKTTILNIEHGDASPTIATLTKLADAMGKRLQTAFV*