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71_003_scaffold_6

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Displaying items 1-30 of 188 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_003_scaffold_6_1
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..1248
DNA (1248bp) protein (416aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31082.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_003_scaffold_6_2
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1253..2206
DNA (954bp) protein (318aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31081.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_003_scaffold_6_3
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2246..4993
DNA (2748bp) protein (916aa)
PREDICTED: mucin-2-like, partial n=1 Tax=Homo sapiens RepID=UPI000387CE00
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31080.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_003_scaffold_6_4
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5044..6600)
DNA (1557bp) protein (519aa)
Serine/threonine protein kinase (EC:2.7.11.1)
Ser/Thr protein kinase D n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0RFK6_MYCXE
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31079.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_003_scaffold_6_5
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6597..7097)
DNA (501bp) protein (167aa)
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31078.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_003_scaffold_6_6
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7343..8965)
DNA (1623bp) protein (541aa)
60 kDa chaperonin n=6 Tax=Bacteria RepID=C0BVC8_9BIFI
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
groEL; molecular chaperone GroEL; K04077 chaperonin GroEL
71_003_scaffold_6_7
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9217..9420)
DNA (204bp) protein (68aa)
Cold-shock DNA-binding domain protein n=1 Tax=Bifidobacterium asteroides (strain PRL2011) RepID=K4J1R6_BIFAP
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:KFI95366.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
cold-shock DNA-binding domain protein
71_003_scaffold_6_8
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9586..10296)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MTI9_BIFBI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31075.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_003_scaffold_6_9
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10407..11144
DNA (738bp) protein (246aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RSA3_9BIFI
71_003_scaffold_6_10
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11208..12278
DNA (1071bp) protein (357aa)
magnesium chelatase family protein; K03924 MoxR-like ATPase [EC:3.6.3.-]
ATPase family associated with various cellular activities (AAA) n=2 Tax=Bifidobacterium dentium RepID=E0Q7W2_9BIFI
ATPase AAA {ECO:0000313|EMBL:KFI95369.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
71_003_scaffold_6_11
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12275..13276
DNA (1002bp) protein (334aa)
Uncharacterized protein n=3 Tax=Bifidobacterium breve RepID=F6C7W3_BIFBA
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31072.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_003_scaffold_6_12
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13273..13830
DNA (558bp) protein (186aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A0V8_BIFAA
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31071.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_003_scaffold_6_13
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13827..14888
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve (strain ACS-071-V-Sch8b) RepID=F6C7W1_BIFBA
Uncharacterized protein {ECO:0000313|EMBL:KFI95372.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
71_003_scaffold_6_14
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14885..15913
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=3 Tax=Bifidobacterium longum RepID=E4R0Z4_BIFLM
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31069.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
protein; K07114 uncharacterized protein
71_003_scaffold_6_15
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15910..16533
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EDP3_BIFLI
Cell surface elastin binding protein EbpS {ECO:0000313|EMBL:KFI95374.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
protein
71_003_scaffold_6_16
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16782..17219
DNA (438bp) protein (146aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=Q8G3F6_BIFLO
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31067.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_003_scaffold_6_17
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17216..18787
DNA (1572bp) protein (524aa)
PGAP1-like domain protein n=1 Tax=Bifidobacterium longum subsp. longum 1-6B RepID=I3B2Z2_BIFLN
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31066.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_003_scaffold_6_18
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18855..19220
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Saccharibacillus kuerlensis RepID=UPI000369A114
Toxin RelE {ECO:0000313|EMBL:KFI95377.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
71_003_scaffold_6_19
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19201..19479
DNA (279bp) protein (93aa)
DNA-binding helix-turn-helix protein n=1 Tax=Oribacterium sp. oral taxon 078 str. F0263 RepID=U2USV6_9FIRM
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31065.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
transcriptional regulator
71_003_scaffold_6_20
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19587..21023
DNA (1437bp) protein (479aa)
Adenylosuccinate lyase {ECO:0000313|EMBL:KFI95379.1}; EC=4.3.2.2 {ECO:0000313|EMBL:KFI95379.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
purB; adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2]
PurB Adenylosuccinate lyase n=4 Tax=Bifidobacterium bifidum RepID=E4P0W5_BIFBP
71_003_scaffold_6_21
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21079..23571
DNA (2493bp) protein (831aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2I7I6_BIFBI
Membrane protein {ECO:0000313|EMBL:KFI95380.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
71_003_scaffold_6_22
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23757..24038
DNA (282bp) protein (94aa)
DNA-binding protein HB1 n=10 Tax=Bifidobacterium RepID=A1A0V0_BIFAA
hup; DNA-binding protein HB1; K03530 DNA-binding protein HU-beta
DNA-binding protein HU {ECO:0000313|EMBL:ADB09419.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 /; Bd1).;"
71_003_scaffold_6_23
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24215..24472
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Streptomyces zinciresistens K42 RepID=G2GLC0_9ACTO
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31061.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_003_scaffold_6_24
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24656..26176)
DNA (1521bp) protein (507aa)
Pup--protein ligase {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320}; EC=6.3.2.n2 {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320};; Proteasome accessory factor A {ECO:0000256|HAMAP-Rule:MF_02111}; Pup-conjugating enzyme {ECO:0000256|HAMAP-Rule:MF_02111}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein; K13571 proteasome accessory factor A [EC:6.3.2.-]
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0W2_BIFBP
71_003_scaffold_6_25
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26176..26367)
DNA (192bp) protein (64aa)
Prokaryotic ubiquitin-like protein Pup n=2 Tax=Bifidobacterium longum RepID=E8MV55_BIFL1
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31059.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein; K13570 prokaryotic ubiquitin-like protein Pup
71_003_scaffold_6_26
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26589..27428)
DNA (840bp) protein (280aa)
Inositol monophosphatase {ECO:0000313|EMBL:KFI95385.1}; EC=3.1.3.25 {ECO:0000313|EMBL:KFI95385.1};; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
Possible inositol monophosphatase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0U6_BIFAA
71_003_scaffold_6_27
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27571..29295)
DNA (1725bp) protein (575aa)
proteasome-associated protein; K13571 proteasome accessory factor A [EC:6.3.2.-]
Hypothetical proteasome-associated protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0U5_BIFAA
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31057.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_003_scaffold_6_28
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29415..30974)
DNA (1560bp) protein (520aa)
ATPase AAA (EC:3.6.1.3); K13527 proteasome-associated ATPase
AAA ATPase forming ring-shaped complexes n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L229_BIFBR
AAA ATPase forming ring-shaped complexes {ECO:0000256|SAAS:SAAS00017598}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
71_003_scaffold_6_29
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31073..31774)
DNA (702bp) protein (234aa)
SNARE-like domain protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EDM9_BIFLI
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31055.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
hypothetical protein
71_003_scaffold_6_30
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31813..32487
DNA (675bp) protein (225aa)
serB1; phosphoserine phosphatase; K01079 phosphoserine phosphatase [EC:3.1.3.3]
SerB Phosphoserine phosphatase n=2 Tax=Bifidobacterium bifidum RepID=E4P0V7_BIFBP
Bifidobacterium scardovii JCM 12489 = DSM 13734 DNA, complete genome {ECO:0000313|EMBL:BAQ31054.1}; TaxID=1150461 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii JCM 12489 = DSM 13734.;"
Displaying items 1-30 of 188 in total

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