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71_003_scaffold_186

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_003_scaffold_186_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..616
DNA (615bp) protein (205aa)
Cellobiose transport system, ATP-binding protein n=4 Tax=Bifidobacterium bifidum RepID=E3ERG6_BIFBS
msiK; cellobiose transport system, ATP-binding protein; K10243 cellobiose transport system ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKE51210.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
71_003_scaffold_186_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(804..1355)
DNA (552bp) protein (184aa)
Transposase for insertion sequence elementIS1086 n=3 Tax=Bifidobacterium bifidum RepID=I3WKJ8_BIFBI
transposase for insertion sequence elementIS1086
Uncharacterized protein {ECO:0000313|EMBL:EFR51209.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
71_003_scaffold_186_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1970..9676
DNA (7707bp) protein (2569aa)
Cell surface protein with LPXTG anchor n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MHQ9_BIFBI
Cell surface protein with LPXTG anchor {ECO:0000313|EMBL:EKF16642.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
cell surface protein with LPXTG anchor
71_003_scaffold_186_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9741..11351
DNA (1611bp) protein (537aa)
LPXTG-motif protein cell wall anchor domain protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2CIE3_BIFBI
LPXTG-motif protein cell wall anchor domain protein {ECO:0000313|EMBL:KFI42105.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
cell surface protein
71_003_scaffold_186_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11432..12415
DNA (984bp) protein (328aa)
Sortase n=2 Tax=Bifidobacterium bifidum RepID=K2LG13_BIFBI
Putative sortase {ECO:0000313|EMBL:BAQ99013.1}; Sortase family protein {ECO:0000313|EMBL:ERI84301.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
sortase
71_003_scaffold_186_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12399..13259
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2M6I1_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF16645.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
71_003_scaffold_186_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13250..14665
DNA (1416bp) protein (472aa)
Lipopolysaccharide kinase (Kdo/WaaP) family protein n=4 Tax=Bifidobacterium bifidum RepID=E3ERF9_BIFBS
Lipopolysaccharide kinase (Kdo/WaaP) family protein
Uncharacterized protein {ECO:0000313|EMBL:KFI42102.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
71_003_scaffold_186_8
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14779..15786)
DNA (1008bp) protein (336aa)
RNA/rRNA methyltransferase protein {ECO:0000313|EMBL:KFI42101.1}; EC=2.1.1.185 {ECO:0000313|EMBL:KFI42101.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
RNA/rRNA methyltransferase protein (EC:2.1.1.66); K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
SpoU rRNA methylase family protein n=7 Tax=Bifidobacterium RepID=E3ERF8_BIFBS
71_003_scaffold_186_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16080..16196
DNA (117bp) protein (39aa)
Uncharacterized protein n=2 Tax=Bifidobacterium bifidum RepID=K2MXJ5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53961.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
71_003_scaffold_186_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16407..19358
DNA (2952bp) protein (984aa)
ATPase P (EC:3.6.3.8)
ATPase, P-type (Transporting) n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4P0H9_BIFBP
Putative calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EFR51200.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
71_003_scaffold_186_11
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19525..21804
DNA (2280bp) protein (760aa)
alpha-galactosidase (EC:3.2.1.22); K07407 alpha-galactosidase [EC:3.2.1.22]
Alpha-galactosidase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6H7Z0_9BIFI
Alpha-galactosidase {ECO:0000313|EMBL:CDB22372.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
71_003_scaffold_186_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21896..22477)
DNA (582bp) protein (194aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Deoxycytidine triphosphate deaminase n=6 Tax=Bifidobacterium bifidum RepID=E3ERF4_BIFBS
71_003_scaffold_186_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22854..24923
DNA (2070bp) protein (690aa)
Na+/H+ antiporter n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ERF3_BIFBS
Na+/H+ antiporter {ECO:0000313|EMBL:ADO53957.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
nhaP; Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family
71_003_scaffold_186_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24957..25703)
DNA (747bp) protein (249aa)
Putative phospholipase/carboxylesterase n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HXP8_BIFBI
Putative phospholipase/carboxylesterase {ECO:0000313|EMBL:EKE51197.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
putative phospholipase/carboxylesterase
71_003_scaffold_186_15
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25861..26313
DNA (453bp) protein (151aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
tRNA-specific adenosine deaminase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ERF1_BIFBS
mesJ; tRNA-specific adenosine deaminase
71_003_scaffold_186_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26327..27835
DNA (1509bp) protein (503aa)
tdcB; threonine dehydratase; K01754 threonine dehydratase [EC:4.3.1.19]
Threonine dehydratase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ERF0_BIFBS
Threonine dehydratase {ECO:0000313|EMBL:ADO53954.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
71_003_scaffold_186_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27999..28832)
DNA (834bp) protein (278aa)
Sir2 (silent information regulator)-like protein; K12410 NAD-dependent deacetylase [EC:3.5.1.-]
Sir2 (Silent information regulator)-like protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ERE9_BIFBS
Sir2 (Silent information regulator)-like protein {ECO:0000313|EMBL:ADO53953.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Displaying 17 items

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