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71_003_scaffold_7

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Displaying items 1-30 of 189 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_003_scaffold_7_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..145
DNA (144bp) protein (48aa)
30S ribosomal protein S20 n=91 Tax=Enterobacteriaceae RepID=RS20_KLEP3
rpsT; 30S ribosomal protein S20; K02968 small subunit ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
71_003_scaffold_7_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

629..2050
DNA (1422bp) protein (474aa)
Uncharacterized protein n=18 Tax=Escherichia coli RepID=I2SFS6_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ENA10988.1}; TaxID=1116047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0299917.1.;"
T3SS effector EspX
71_003_scaffold_7_3
unknown

Not on your lists

2079..2210
DNA (132bp) protein (44aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=L3EJ50_ECOLX
71_003_scaffold_7_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2491..3636
DNA (1146bp) protein (382aa)
Uncharacterized protein n=37 Tax=Escherichia coli RepID=G1YIB8_ECOLX
Fimbrial protein {ECO:0000313|EMBL:KHJ17724.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
71_003_scaffold_7_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3649..4608
DNA (960bp) protein (320aa)
Uncharacterized protein n=295 Tax=Escherichia coli RepID=A7ZHA8_ECO24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZE31879.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
71_003_scaffold_7_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4647..5546)
DNA (900bp) protein (300aa)
Transcriptional activator of nhaA n=651 Tax=Enterobacteriaceae RepID=J7QWQ5_ECOLX
nhaR; transcriptional activator NhaR
Transcriptional activator protein NhaR {ECO:0000313|EMBL:EII45139.1}; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
71_003_scaffold_7_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5612..6778)
DNA (1167bp) protein (389aa)
Na(+)/H(+) antiporter NhaA n=406 Tax=Enterobacteriaceae RepID=NHAA_ECO24
nhaA; pH-dependent sodium/proton antiporter; K03313 Na+:H+ antiporter, NhaA family
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
71_003_scaffold_7_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7307..7516
DNA (210bp) protein (70aa)
Regulatory protein n=2 Tax=Escherichia coli RepID=V8ITV3_ECOLX
mokC; regulatory protein MokC for HokC
Hok/gef family protein {ECO:0000313|EMBL:EGB66063.1}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
71_003_scaffold_7_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7620..8750)
DNA (1131bp) protein (377aa)
Chaperone protein DnaJ n=3 Tax=Enterobacteriaceae RepID=Q0TLX4_ECOL5
dnaJ; chaperone protein DnaJ; K03686 molecular chaperone DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
71_003_scaffold_7_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8839..10755)
DNA (1917bp) protein (639aa)
Chaperone protein DnaK n=1260 Tax=Enterobacteriaceae RepID=DNAK_ECO24
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
dnaK; chaperone Hsp70; K04043 molecular chaperone DnaK
71_003_scaffold_7_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11132..11536
DNA (405bp) protein (135aa)
UPF0412 protein YaaI n=299 Tax=Enterobacteriaceae RepID=YAAI_ECO24
yaaI; hypothetical protein
UPF0412 protein YaaI {ECO:0000256|HAMAP-Rule:MF_01372}; Flags: Precursor;; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
71_003_scaffold_7_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11562..12275
DNA (714bp) protein (238aa)
Uncharacterized protein n=250 Tax=Enterobacteriaceae RepID=A7ZHA1_ECO24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZE49254.1}; TaxID=1446549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O118:H16 str. 2009C-4446.;"
71_003_scaffold_7_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12424..12990
DNA (567bp) protein (189aa)
Inner membrane protein YaaH n=932 Tax=Enterobacteriaceae RepID=YAAH_ECO57
hypothetical protein
GPR1/FUN34/yaaH family protein {ECO:0000313|EMBL:EFZ57077.1}; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LT-68.;"
71_003_scaffold_7_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13025..13612)
DNA (588bp) protein (196aa)
mogA; molybdenum cofactor biosynthesis protein MogA; K03831 molybdopterin adenylyltransferase [EC:2.7.7.75]
Molybdopterin adenylyltransferase n=399 Tax=Enterobacteriaceae RepID=MOG_ECO57
Molybdopterin adenylyltransferase {ECO:0000313|EMBL:KEL87542.1}; TaxID=1444157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S3_C2.;"
71_003_scaffold_7_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13727..14680)
DNA (954bp) protein (318aa)
tal; transaldolase (EC:2.2.1.2); K00616 transaldolase [EC:2.2.1.2]
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00492, ECO:0000256|RuleBase:RU004155};; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
Transaldolase B n=547 Tax=Enterobacteriaceae RepID=TALB_ECOL6
71_003_scaffold_7_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14959..16389
DNA (1431bp) protein (477aa)
AGCS family alanine or glycine:cation symporter n=6 Tax=Escherichia coli RepID=D6I4Q6_ECOLX
Sodium:alanine symporter {ECO:0000313|EMBL:KDV39718.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
transporter
71_003_scaffold_7_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16459..17235
DNA (777bp) protein (259aa)
UPF0246 protein YaaA n=6 Tax=Escherichia coli RepID=D6I4Q5_ECOLX
UPF0246 protein YaaA {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
hypothetical protein
71_003_scaffold_7_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17388..17684)
DNA (297bp) protein (99aa)
Uncharacterized protein n=7 Tax=Escherichia coli RepID=L5IVM0_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDX46779.1}; TaxID=1444151 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C2.;"
71_003_scaffold_7_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17898..19184)
DNA (1287bp) protein (429aa)
thrC; threonine synthase; K01733 threonine synthase [EC:4.2.3.1]
Threonine synthase {ECO:0000313|EMBL:KDW84109.1}; EC=4.2.3.1 {ECO:0000313|EMBL:KDW84109.1};; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
Threonine synthase n=792 Tax=Enterobacteriaceae RepID=C3TRQ2_ECOLX
71_003_scaffold_7_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19185..20117)
DNA (933bp) protein (311aa)
thrB; homoserine kinase; K00872 homoserine kinase [EC:2.7.1.39]
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00129832};; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.12.;"
Homoserine kinase n=612 Tax=Enterobacteriaceae RepID=KHSE_ECO24
71_003_scaffold_7_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20119..22581)
DNA (2463bp) protein (821aa)
thrA; bifunctional aspartokinase I/homoserine dehydrogenase I (EC:2.7.2.4)
Bifunctional aspartokinase/homoserine dehydrogenase 1 n=1 Tax=Escherichia coli KTE210 RepID=L3EL33_ECOLX
Homoserine dehydrogenase {ECO:0000313|EMBL:ESA64149.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
71_003_scaffold_7_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22941..23627)
DNA (687bp) protein (229aa)
lasT; rRNA methyltransferase; K02533 tRNA/rRNA methyltransferase [EC:2.1.1.-]
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1446741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:H2 str. 2009C-3686.;"
Uncharacterized protein n=97 Tax=Enterobacteriaceae RepID=B6I6Q1_ECOSE
71_003_scaffold_7_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24263..24979
DNA (717bp) protein (239aa)
Aerobic respiration control protein ArcA n=1411 Tax=Enterobacteriaceae RepID=ARCA_ECO57
two-component response regulator; K07773 two-component system, OmpR family, aerobic respiration control protein ArcA
DNA-binding response regulator in two-component regulatory system with ArcB or CpxA {ECO:0000313|EMBL:CAR16141.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
71_003_scaffold_7_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25039..26391)
DNA (1353bp) protein (451aa)
Inner membrane protein n=59 Tax=Escherichia coli RepID=D6I4P8_ECOLX
Inner membrane protein CreD {ECO:0000313|EMBL:EGU99851.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
hypothetical protein
71_003_scaffold_7_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26449..27873)
DNA (1425bp) protein (475aa)
integral membrane sensor signal transduction histidine kinase; K07641 two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1444223 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-267-03_S4_C1.;"
Sensor protein CreC n=115 Tax=Enterobacteriaceae RepID=A7ZVU1_ECO24
71_003_scaffold_7_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27873..28562)
DNA (690bp) protein (230aa)
Transcriptional regulatory protein CreB n=202 Tax=Escherichia coli RepID=A8A8C7_ECOHS
DNA-binding response regulator CreB
Response regulator receiver domain protein {ECO:0000313|EMBL:EFI88540.1}; TaxID=749548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 196-1.;"
71_003_scaffold_7_27
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28575..29048)
DNA (474bp) protein (158aa)
Protein CreA n=1407 Tax=Enterobacteriaceae RepID=CREA_ECO57
creA; hypothetical protein; K05805 CreA protein
Protein CreA {ECO:0000256|PIRNR:PIRNR003174}; Catabolite regulation protein A {ECO:0000256|PIRNR:PIRNR003174}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
71_003_scaffold_7_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29259..30128
DNA (870bp) protein (290aa)
Right origin-binding protein n=1075 Tax=Enterobacteriaceae RepID=ROB_ECO57
right origin-binding protein; K05804 right origin-binding protein
Right origin-binding protein {ECO:0000313|EMBL:EFJ79840.1}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 69-1.;"
71_003_scaffold_7_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30125..30772)
DNA (648bp) protein (216aa)
ytjC; phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Probable phosphoglycerate mutase GpmB {ECO:0000256|HAMAP-Rule:MF_01040, ECO:0000256|SAAS:SAAS00013984}; EC=5.4.2.- {ECO:0000256|HAMAP-Rule:MF_01040, ECO:0000256|SAAS:SAAS00013981};; PGAM {ECO:0000256|HAMAP-Rule:MF_01040}; Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01040}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
Probable phosphoglycerate mutase GpmB n=978 Tax=Enterobacteriaceae RepID=GPMB_ECO24
71_003_scaffold_7_30
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30824..31345
DNA (522bp) protein (174aa)
Non-canonical purine NTP phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00648};; Non-standard purine NTP phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; Nucleoside-triphosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_00648}; TaxID=766150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri K-315.;"
Non-canonical purine NTP phosphatase n=6 Tax=Shigella sonnei RepID=Q3YU00_SHISS
yjjX; NTPase
Displaying items 1-30 of 189 in total

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