ggKbase home page

71_003_scaffold_66

Search features with annotation key words

Displaying items 1-30 of 129 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_003_scaffold_66_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21..1169)
DNA (1149bp) protein (383aa)
Transposase IS609 (Fragment) n=1 Tax=Escherichia coli ATCC BAA-2193 RepID=V4VEC0_ECOLX
putative IS609 transposase TnpB
Transposase, IS605 OrfB family {ECO:0000313|EMBL:EHW71177.1}; TaxID=868181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC10B.;"
71_003_scaffold_66_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2472..3269)
DNA (798bp) protein (266aa)
Predicted ARAC-type regulatory protein n=118 Tax=Escherichia RepID=C8UCA6_ECO1A
putative transcriptional regulator
Transcriptional regulator YbcM {ECO:0000313|EMBL:EOW15283.1}; TaxID=1182702 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE103.;"
71_003_scaffold_66_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3279..3830)
DNA (552bp) protein (184aa)
Uncharacterized protein n=52 Tax=Escherichia RepID=J7Q832_ECOLX
putative kinase inhibitor; K06910
Phage kinase inhibitor {ECO:0000313|EMBL:ELC08553.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
71_003_scaffold_66_4
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3999..4331)
DNA (333bp) protein (111aa)
Putative multidrug resistance protein DLP12 prophage n=1 Tax=Escherichia coli O81 (strain ED1a) RepID=B7MWC5_ECO81
emrE; multidrug efflux protein; K03297 small multidrug resistance protein, SMR family
EmrE SMR transporter {ECO:0000313|EMBL:ADA74361.1}; TaxID=591020 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri serotype X (strain 2002017).;"
71_003_scaffold_66_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4665..4979)
DNA (315bp) protein (105aa)
Flagellar hook-basal body complex protein FliE n=3 Tax=Escherichia coli RepID=D8ERC0_ECOLX
fliE; flagellar hook-basal body protein FliE; K02408 flagellar hook-basal body complex protein FliE
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
71_003_scaffold_66_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5194..6852
DNA (1659bp) protein (553aa)
Flagellar M-ring protein n=68 Tax=Escherichia coli RepID=J7QF71_ECOLX
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
fliF; flagellar MS-ring protein
71_003_scaffold_66_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6845..7840
DNA (996bp) protein (332aa)
Flagellar motor switch protein FliG n=1290 Tax=Enterobacteriaceae RepID=FLIG_ECO57
fliG; flagellar motor switch protein FliG; K02410 flagellar motor switch protein FliG
Flagellar motor switch protein FliG {ECO:0000256|PIRNR:PIRNR003161}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;"
71_003_scaffold_66_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7833..8519
DNA (687bp) protein (229aa)
Flagellar assembly protein FliH n=226 Tax=Escherichia RepID=B1IZW9_ECOLC
fliH; flagellar assembly protein H; K02411 flagellar assembly protein FliH
Flagellar assembly protein fliH {ECO:0000313|EMBL:ELC08558.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
71_003_scaffold_66_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8519..9892
DNA (1374bp) protein (458aa)
fliI; flagellum-specific ATP synthase; K02412 flagellum-specific ATP synthase [EC:3.6.3.14]
ATP synthase {ECO:0000313|EMBL:KDV30840.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KDV30840.1};; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
Flagellum-specific ATP synthase n=15 Tax=Escherichia coli RepID=B6I0Y8_ECOSE
71_003_scaffold_66_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9911..10354
DNA (444bp) protein (148aa)
Flagellar fliJ protein n=1137 Tax=Enterobacteriaceae RepID=C3T4V2_ECOLX
fliJ; flagellar protein FliJ; K02413 flagellar FliJ protein
Flagellar FliJ protein {ECO:0000256|PIRNR:PIRNR019404}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
71_003_scaffold_66_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10351..11478
DNA (1128bp) protein (376aa)
Flagellar hook-length control protein n=112 Tax=Escherichia RepID=B7L8V5_ECO55
flagellar hook-length control protein
Flagellar hook-length control protein {ECO:0000313|EMBL:EGB88071.1}; TaxID=749539 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 117-3.;"
71_003_scaffold_66_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11583..12047
DNA (465bp) protein (155aa)
Flagellar protein FliL n=1009 Tax=Enterobacteriaceae RepID=FLIL_ECO57
fliL; flagellar basal body-associated protein FliL; K02415 flagellar FliL protein
Flagellar protein FliL {ECO:0000313|EMBL:EOV61684.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
71_003_scaffold_66_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12052..13056
DNA (1005bp) protein (335aa)
Flagellar motor switch protein FliM n=1239 Tax=Gammaproteobacteria RepID=C3T4T7_ECOLX
fliM; flagellar motor switch protein fliM
Flagellar motor switch protein FliM {ECO:0000256|PIRNR:PIRNR002888}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
71_003_scaffold_66_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13053..13466
DNA (414bp) protein (138aa)
Flagellar biosynthesis, component of motor switch and energizing, enabling rotation and determining its direction n=839 Tax=Enterobacteriaceae RepID=C3T4T3_ECOLX
fliN; flagellar motor switch protein FliN; K02417 flagellar motor switch protein FliN/FliY
Flagellar motor switch protein FliN {ECO:0000313|EMBL:EMV59902.1}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
71_003_scaffold_66_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13469..13834
DNA (366bp) protein (122aa)
Flagellar protein FliO n=83 Tax=Escherichia coli RepID=A7ZN70_ECO24
fliO; flagellar biosynthesis protein FliO; K02418 flagellar protein FliO/FliZ
Flagellar biosynthetic protein FliO {ECO:0000313|EMBL:KDU26816.1}; TaxID=1444251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-267-03_S4_C2.;"
71_003_scaffold_66_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13834..14571
DNA (738bp) protein (246aa)
Flagellar biosynthetic protein FliP n=571 Tax=Enterobacteriaceae RepID=FLIP_ECO57
fliP; flagellar biosynthesis protein FliP; K02419 flagellar biosynthetic protein FliP
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:EFK03163.1}; TaxID=749545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 182-1.;"
71_003_scaffold_66_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14581..14850
DNA (270bp) protein (90aa)
Flagellar biosynthetic protein FliQ n=1346 Tax=Enterobacteriaceae RepID=FLIQ_ECO57
fliQ; flagellar biosynthesis protein FliQ; K02420 flagellar biosynthetic protein FliQ
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:KDY19453.1}; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-316-03_S4_C2.;"
71_003_scaffold_66_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14859..15644
DNA (786bp) protein (262aa)
Flagellar biosynthetic protein fliR n=260 Tax=Escherichia coli RepID=A1AC99_ECOK1
fliR; flagellar biosynthesis protein FliR; K02421 flagellar biosynthetic protein FliR
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
71_003_scaffold_66_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15934..16557
DNA (624bp) protein (208aa)
Transcriptional regulatory protein RcsA n=362 Tax=Enterobacteriaceae RepID=RCSA_ECOLX
rcsA; colanic acid capsular biosynthesis activation protein A
Transcriptional regulatory protein RcsA {ECO:0000256|HAMAP-Rule:MF_00982}; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C2.;"
71_003_scaffold_66_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16601..16789)
DNA (189bp) protein (63aa)
Protein DsrB n=3 Tax=Escherichia coli RepID=E9XIP5_ECOLX
dsrB; oxidoreductase Fe-S binding subunit
Protein DsrB {ECO:0000256|HAMAP-Rule:MF_01549, ECO:0000256|SAAS:SAAS00024808}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
71_003_scaffold_66_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16952..17179
DNA (228bp) protein (76aa)
Uncharacterized protein YodD n=1372 Tax=Enterobacteriaceae RepID=YODD_ECOL6
yodD; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZJ40955.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
71_003_scaffold_66_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17477..18292
DNA (816bp) protein (272aa)
mannosyl-3-phosphoglycerate phosphatase (EC:3.1.3.70); K07026 mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
Putative mannosyl-3-phosphoglycerate phosphatase {ECO:0000256|HAMAP-Rule:MF_00617}; Short=MPGP {ECO:0000256|HAMAP-Rule:MF_00617};; EC=3.1.3.70 {ECO:0000256|HAMAP-Rule:MF_00617};; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
Putative mannosyl-3-phosphoglycerate phosphatase n=101 Tax=Enterobacteriaceae RepID=MPGP_ECO24
71_003_scaffold_66_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18289..19983)
DNA (1695bp) protein (565aa)
Diguanylate cyclase n=48 Tax=Escherichia coli RepID=E0J191_ECOLW
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ADX50436.1}; TaxID=595495 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 55124 / KO11).;"
71_003_scaffold_66_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20154..20336)
DNA (183bp) protein (61aa)
Uncharacterized protein YodC n=799 Tax=Enterobacteriaceae RepID=YODC_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHX27338.1}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
71_003_scaffold_66_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20415..21332)
DNA (918bp) protein (306aa)
Uncharacterized protein n=88 Tax=Enterobacteriaceae RepID=J7R2A7_ECOLX
yedI; hypothetical protein; K09781 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH11751.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
71_003_scaffold_66_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21505..22425
DNA (921bp) protein (307aa)
Carboxylate/amino acid/amine transporter n=108 Tax=Enterobacteriaceae RepID=B1LQQ0_ECOSM
hypothetical protein; K15269 probable blue pigment (indigoidine) exporter
Carboxylate/amino acid/amine transporter {ECO:0000313|EMBL:ACB17603.1}; TaxID=439855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SMS-3-5 / SECEC).;"
71_003_scaffold_66_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22414..22884)
DNA (471bp) protein (157aa)
DNA mismatch endonuclease, patch repair protein n=266 Tax=Enterobacteriaceae RepID=J7R5P8_ECOLX
very short patch repair endonuclease
Very short patch repair endonuclease {ECO:0000313|EMBL:AKE83824.1}; TaxID=1048254 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 str. C227-11.;"
71_003_scaffold_66_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22865..24283)
DNA (1419bp) protein (473aa)
dcm; DNA cytosine methylase (EC:2.1.1.37); K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=439855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SMS-3-5 / SECEC).;"
Cytosine-specific methyltransferase n=6 Tax=Escherichia coli RepID=B1LQP8_ECOSM
71_003_scaffold_66_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24350..25045)
DNA (696bp) protein (232aa)
Predicted phosphohydrolase n=141 Tax=Enterobacteriaceae RepID=C8U3P1_ECO10
yedJ; hypothetical protein; K06950 uncharacterized protein
Putative metal-dependent phosphohydrolase {ECO:0000313|EMBL:ACB19167.1}; TaxID=439855 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain SMS-3-5 / SECEC).;"
71_003_scaffold_66_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25085..25468)
DNA (384bp) protein (128aa)
Uncharacterized protein n=384 Tax=Enterobacteriaceae RepID=J7R2B1_ECOLX
hypothetical protein
Inner membrane protein yedR {ECO:0000313|EMBL:EOV61702.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
Displaying items 1-30 of 129 in total

View Taxonomy