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71_003_scaffold_233

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_003_scaffold_233_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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410..1999
DNA (1590bp) protein (530aa)
purH; fused IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase; K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
Bifunctional purine biosynthesis protein PurH n=265 Tax=Enterobacteriaceae RepID=PUR9_ECO8A
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1444223 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-267-03_S4_C1.;"
71_003_scaffold_233_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2011..3300
DNA (1290bp) protein (430aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=4 Tax=Escherichia coli RepID=H4XCK1_ECOLX
71_003_scaffold_233_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3297..4622)
DNA (1326bp) protein (442aa)
Transcriptional regulatory protein zraR n=1 Tax=Escherichia coli KTE210 RepID=L3EKZ3_ECOLX
zraR; fused response regulator/sigma54 interaction protein
Transcriptional regulatory protein zraR {ECO:0000313|EMBL:EMV51586.1}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
71_003_scaffold_233_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4619..5995)
DNA (1377bp) protein (459aa)
zraS; sensor protein ZraS; K07709 two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1444223 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-267-03_S4_C1.;"
Sensor protein n=239 Tax=Escherichia coli RepID=J7R8Q4_ECOLX
71_003_scaffold_233_5
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6102..6230
DNA (129bp) protein (43aa)
Uncharacterized protein n=663 Tax=Enterobacteriaceae RepID=B5Z099_ECO5E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFW47969.1}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae CDC 74-1112.;"
71_003_scaffold_233_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6233..6658
DNA (426bp) protein (142aa)
Zinc resistance-associated protein n=658 Tax=Enterobacteriaceae RepID=ZRAP_ECO57
zraP; zinc resistance protein; K07803 zinc resistance-associated protein
Zinc resistance protein {ECO:0000313|EMBL:ESE06286.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
71_003_scaffold_233_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6660..7295)
DNA (636bp) protein (212aa)
Uncharacterized protein n=119 Tax=Enterobacteriaceae RepID=C3SI37_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW03608.1}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
71_003_scaffold_233_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7368..7640)
DNA (273bp) protein (91aa)
DNA-binding protein HU-alpha n=1444 Tax=Enterobacteriaceae RepID=DBHA_ECO57
hupA; DNA-binding protein HU-alpha; K05787 DNA-binding protein HU-alpha
DNA-binding protein HU-alpha {ECO:0000313|EMBL:EFJ84259.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
71_003_scaffold_233_9
Escherichia sp. KTE52, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7827..8417)
DNA (591bp) protein (197aa)
Uncharacterized protein YjaG n=506 Tax=Enterobacteriaceae RepID=YJAG_ECOLI
hypothetical protein; K09891 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOV46022.1}; TaxID=1182659 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE52.;"
71_003_scaffold_233_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8460..9131)
DNA (672bp) protein (224aa)
nfi; endonuclease V; K05982 deoxyribonuclease V [EC:3.1.21.7]
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
Endonuclease V n=1 Tax=Escherichia coli IS5 RepID=V6EQL2_ECOLX
71_003_scaffold_233_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9141..10205)
DNA (1065bp) protein (355aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37]
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
Uroporphyrinogen decarboxylase n=541 Tax=cellular organisms RepID=DCUP_ECO24
71_003_scaffold_233_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10245..11018)
DNA (774bp) protein (258aa)
nudC; NADH pyrophosphatase; K03426 NAD+ diphosphatase [EC:3.6.1.22]
NADH pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016168}; EC=3.6.1.22 {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016202};; TaxID=244319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11.;"
NADH pyrophosphatase n=510 Tax=cellular organisms RepID=NUDC_ECO24
71_003_scaffold_233_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11113..11589
DNA (477bp) protein (159aa)
Regulator of sigma D n=964 Tax=Enterobacteriaceae RepID=RSD_ECO24
regulator of RpoD, Rsd/AlgQ; K07740 regulator of sigma D
Regulator of sigma D {ECO:0000256|HAMAP-Rule:MF_01181, ECO:0000256|SAAS:SAAS00010112}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
71_003_scaffold_233_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11821..13716
DNA (1896bp) protein (632aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B7A.;"
Phosphomethylpyrimidine synthase n=35 Tax=Escherichia coli RepID=B3HI13_ECOLX
thiamine biosynthesis protein ThiC
71_003_scaffold_233_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13716..14351
DNA (636bp) protein (212aa)
thiamine-phosphate pyrophosphorylase; K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
Thiamine-phosphate synthase n=245 Tax=Enterobacteriaceae RepID=THIE_ECOSE
71_003_scaffold_233_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14344..15099
DNA (756bp) protein (252aa)
thiamine biosynthesis adenylyltransferase ThiF; K03148 sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
Thiazole biosynthesis adenylyltransferase ThiF {ECO:0000313|EMBL:ENA03278.1}; EC=2.7.7.73 {ECO:0000313|EMBL:ENA03278.1};; TaxID=1116047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0299917.1.;"
Thiamine biosynthesis adenylyltransferase ThiF n=47 Tax=Enterobacteriaceae RepID=B6I5K3_ECOSE
71_003_scaffold_233_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15083..15283
DNA (201bp) protein (67aa)
Thiamine biosynthesis protein ThiS n=150 Tax=Enterobacteriaceae RepID=A8A791_ECOHS
sulfur carrier protein ThiS; K03154 sulfur carrier protein
Sulfur carrier protein ThiS {ECO:0000313|EMBL:ELI19833.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
71_003_scaffold_233_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15285..16055
DNA (771bp) protein (257aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
Thiazole synthase n=40 Tax=Enterobacteriaceae RepID=THIG_ECOHS
thiG; thiazole synthase; K03149 thiamine biosynthesis ThiG
71_003_scaffold_233_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16052..17185
DNA (1134bp) protein (378aa)
Thiamin biosynthesis, thiazole moiety n=122 Tax=Enterobacteriaceae RepID=J7QAX3_ECOLX
thiH; thiamine biosynthesis protein ThiH; K03150 thiamine biosynthesis ThiH
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:EMU65944.1}; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.12.;"
71_003_scaffold_233_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17595..18134)
DNA (540bp) protein (180aa)
Heat shock protein C n=480 Tax=Enterobacteriaceae RepID=HTRC_ECOLI
stationary phase growth adaptation protein
Heat shock protein htrC {ECO:0000313|EMBL:EHW09874.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
71_003_scaffold_233_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18347..19270)
DNA (924bp) protein (308aa)
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C3.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Escherichia coli P0305260.13 RepID=N4EGE2_ECOLX
Displaying 21 items

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