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71_007_scaffold_1950

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_1950_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1380
DNA (1380bp) protein (460aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=1268976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113290.;"
Phosphomethylpyrimidine synthase n=1 Tax=Escherichia coli P0305260.15 RepID=N4EWU8_ECOLX
thiC; thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC
71_007_scaffold_1950_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1380..1952
DNA (573bp) protein (191aa)
thiamine-phosphate pyrophosphorylase; K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
Thiamine-phosphate synthase n=15 Tax=Escherichia coli RepID=F4W2R9_ECOLX
71_007_scaffold_1950_3
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2049..2774
DNA (726bp) protein (242aa)
thiamine biosynthesis adenylyltransferase ThiF; K03148 sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
Thiazole biosynthesis adenylyltransferase ThiF n=7 Tax=Escherichia coli RepID=M8XVL5_ECOLX
Thiazole biosynthesis adenylyltransferase ThiF {ECO:0000313|EMBL:EIQ23018.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
71_007_scaffold_1950_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2758..2958
DNA (201bp) protein (67aa)
Thiamine biosynthesis protein ThiS n=150 Tax=Enterobacteriaceae RepID=A8A791_ECOHS
sulfur carrier protein ThiS; K03154 sulfur carrier protein
Sulfur carrier protein ThiS {ECO:0000313|EMBL:ELI19833.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
71_007_scaffold_1950_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2960..3196
DNA (237bp) protein (79aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=869688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2.3916.;"
Thiazole synthase n=1 Tax=Escherichia coli E101 RepID=H1ECX6_ECOLX
thiG; thiazole synthase; K03149 thiamine biosynthesis ThiG
71_007_scaffold_1950_6
Shigella sonnei, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3288..3707
DNA (420bp) protein (140aa)
Thiazole synthase {ECO:0000255|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000255|HAMAP-Rule:MF_00443};; TaxID=300269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella sonnei (strain Ss046).;"
Thiazole synthase n=1 Tax=Shigella flexneri CDC 796-83 RepID=E7TBB3_SHIFL
thiG; thiazole synthase; K03149 thiamine biosynthesis ThiG
71_007_scaffold_1950_7
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3704..4921
DNA (1218bp) protein (406aa)
Thiamin biosynthesis, thiazole moiety n=122 Tax=Enterobacteriaceae RepID=J7QAX3_ECOLX
thiH; thiamine biosynthesis protein ThiH; K03150 thiamine biosynthesis ThiH
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:CDK72290.1}; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS22.;"
71_007_scaffold_1950_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5165..5704)
DNA (540bp) protein (180aa)
Heat shock protein C n=480 Tax=Enterobacteriaceae RepID=HTRC_ECOLI
stationary phase growth adaptation protein
Heat shock protein htrC {ECO:0000313|EMBL:EHW09874.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
71_007_scaffold_1950_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5917..6576)
DNA (660bp) protein (220aa)
DNA-directed RNA polymerase, beta'-subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
DNA-directed RNA polymerase subunit beta' n=2 Tax=Escherichia coli RepID=E1PAV3_ECOAB
71_007_scaffold_1950_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6830..7807)
DNA (978bp) protein (326aa)
rpoC; DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
DNA-directed RNA polymerase subunit beta' n=2 Tax=Escherichia coli RepID=M8QRL7_ECOLX
71_007_scaffold_1950_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7752..8396)
DNA (645bp) protein (215aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6); K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
DNA-directed RNA polymerase subunit beta' n=6 Tax=Escherichia RepID=B7LUL4_ESCF3
Displaying 11 items

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