ggKbase home page

71_007_scaffold_62

Search features with annotation key words

Displaying items 61-90 of 142 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
71_007_scaffold_62_59
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63042..63623)
DNA (582bp) protein (194aa)
sodB; superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
Superoxide dismutase [Fe] n=1325 Tax=Bacteria RepID=SODF_ECO57
71_007_scaffold_62_60
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63751..64566)
DNA (816bp) protein (272aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=M9HRC5_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EMX49743.1}; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;"
NLP/P60 protein
71_007_scaffold_62_61
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64901..65248
DNA (348bp) protein (116aa)
Glutaredoxin-4 n=1432 Tax=Enterobacteriaceae RepID=GLRX4_ECO57
hypothetical protein; K07390 monothiol glutaredoxin
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1444053 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C1.;"
71_007_scaffold_62_62
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65299..69915)
DNA (4617bp) protein (1539aa)
lhr; ATP-dependent helicase Lhr; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
DEAD/DEAH box helicase family protein Lhr n=31 Tax=Enterobacteriaceae RepID=A7ZMB7_ECO24
DEAD/DEAH box helicase {ECO:0000313|EMBL:EGJ04897.1}; TaxID=556266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli D9.;"
71_007_scaffold_62_63
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70008..70655)
DNA (648bp) protein (216aa)
ribonuclease T (EC:3.1.13.-); K03683 ribonuclease T [EC:3.1.13.-]
Ribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051933}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00157};; Exoribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
Ribonuclease T n=1091 Tax=Enterobacteriaceae RepID=RNT_ECO24
71_007_scaffold_62_64
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70758..71165)
DNA (408bp) protein (136aa)
gloA; glyoxalase I, Ni-dependent; K01759 lactoylglutathione lyase [EC:4.4.1.5]
Lactoylglutathione lyase {ECO:0000256|RuleBase:RU361179}; EC=4.4.1.5 {ECO:0000256|RuleBase:RU361179};; Glyoxalase I {ECO:0000256|RuleBase:RU361179}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.1.;"
Lactoylglutathione lyase (Fragment) n=2 Tax=Escherichia coli RepID=E9TLV7_ECOLX
71_007_scaffold_62_65
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71246..72343)
DNA (1098bp) protein (366aa)
N-ethylmaleimide reductase n=193 Tax=Enterobacteriaceae RepID=J7QRL9_ECOLX
nemA; N-ethylmaleimide reductase
Oxidoreductase, FAD/FMN-binding protein {ECO:0000313|EMBL:EFU37517.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
71_007_scaffold_62_66
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72380..72979)
DNA (600bp) protein (200aa)
HTH-type transcriptional repressor NemR n=838 Tax=Enterobacteriaceae RepID=NEMR_ECOL6
ydhM; transcriptional regulator YdhM
HTH-type transcriptional repressor nemR {ECO:0000313|EMBL:EQP55055.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
71_007_scaffold_62_67
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73082..73321
DNA (240bp) protein (80aa)
Uncharacterized protein YdhL n=350 Tax=Enterobacteriaceae RepID=YDHL_ECOLI
ydhL; hypothetical protein; K06938
Uncharacterized protein {ECO:0000313|EMBL:EQO68334.1}; TaxID=1280991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 41 (4-2677849).;"
71_007_scaffold_62_68
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73370..74266
DNA (897bp) protein (299aa)
Oxidoreductase YdhF {ECO:0000313|EMBL:KDU23185.1}; EC=1.-.-.- {ECO:0000313|EMBL:KDU23185.1};; TaxID=1444251 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-267-03_S4_C2.;"
Predicted oxidoreductase n=229 Tax=Enterobacteriaceae RepID=C8TSC3_ECO26
ydhF; putative oxidoreductase
71_007_scaffold_62_69
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74347..74868
DNA (522bp) protein (174aa)
superoxide dismutase; K04565 Cu/Zn superoxide dismutase [EC:1.15.1.1]
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=1116135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021552.12.;"
Superoxide dismutase [Cu-Zn] n=893 Tax=Enterobacteriaceae RepID=SODC_ECO57
71_007_scaffold_62_70
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74869..76881)
DNA (2013bp) protein (671aa)
Uncharacterized protein n=167 Tax=Escherichia coli RepID=B6IB84_ECOSE
hypothetical protein
Fusaric acid resistance protein conserved region {ECO:0000313|EMBL:EFO60260.1}; TaxID=679204 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 145-7.;"
71_007_scaffold_62_71
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76881..77651)
DNA (771bp) protein (257aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Escherichia coli 2770900 RepID=M9BHT8_ECOLX
ydhJ; undecaprenyl pyrophosphate phosphatase
HlyD secretion family protein {ECO:0000313|EMBL:EHW17625.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
71_007_scaffold_62_72
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77741..77977)
DNA (237bp) protein (79aa)
Uncharacterized protein YdhI n=991 Tax=Enterobacteriaceae RepID=YDHI_ECO57
ydhI; hypothetical protein
PF07869 family protein {ECO:0000313|EMBL:EII22873.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
71_007_scaffold_62_73
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78178..78612
DNA (435bp) protein (145aa)
Transcriptional regulator SlyA n=740 Tax=Enterobacteriaceae RepID=SLYA_ECO24
slyA; DNA-binding transcriptional activator SlyA; K06075 MarR family transcriptional regulator, transcriptional regulator for hemolysin
Transcriptional regulator SlyA {ECO:0000256|HAMAP-Rule:MF_01819}; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-182-04_S3_C1.;"
71_007_scaffold_62_74
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(78659..79126)
DNA (468bp) protein (156aa)
Outer membrane lipoprotein SlyB n=999 Tax=Enterobacteriaceae RepID=SLYB_ECO57
slyB; outer membrane lipoprotein; K06077 outer membrane lipoprotein SlyB
Outer membrane lipoprotein slyB {ECO:0000313|EMBL:ERA01221.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
71_007_scaffold_62_75
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79400..80509
DNA (1110bp) protein (370aa)
anmK; anhydro-N-acetylmuramic acid kinase; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908541.;"
Anhydro-N-acetylmuramic acid kinase n=149 Tax=Enterobacteriaceae RepID=ANMK_ECOSE
71_007_scaffold_62_76
Shigella sonnei, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80613..80936
DNA (324bp) protein (108aa)
Uncharacterized protein n=402 Tax=Enterobacteriaceae RepID=B6IB78_ECOSE
ydhA; lysozyme inhibitor
Inhibitor of c-type lysozyme, predicted lipoprotein {ECO:0000313|EMBL:EJL17929.1}; TaxID=754077 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella sonnei str. Moseley.;"
71_007_scaffold_62_77
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

80995..81651
DNA (657bp) protein (219aa)
pdxH; pyridoxamine 5'-phosphate oxidase; K00275 pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908541.;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=347 Tax=Enterobacteriaceae RepID=PDXH_ECO55
71_007_scaffold_62_78
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81994..82968
DNA (975bp) protein (325aa)
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1]
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE102.;"
Tyrosine--tRNA ligase n=1 Tax=Escherichia coli 907672 RepID=V0SVW5_ECOLX
71_007_scaffold_62_79
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83030..83890
DNA (861bp) protein (287aa)
pyridoxal kinase (EC:2.7.1.35); K00868 pyridoxine kinase [EC:2.7.1.35]
Pyridoxamine kinase {ECO:0000256|HAMAP-Rule:MF_01639, ECO:0000256|SAAS:SAAS00011110}; Short=PM kinase {ECO:0000256|HAMAP-Rule:MF_01639};; EC=2.7.1.35 {ECO:0000256|HAMAP-Rule:MF_01639, ECO:0000256|SAAS:SAAS00088591};; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
Pyridoxamine kinase n=554 Tax=Enterobacteriaceae RepID=PDXY_ECOLI
71_007_scaffold_62_80
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83934..84539)
DNA (606bp) protein (202aa)
glutathione S-transferase; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase GstA n=669 Tax=Enterobacteriaceae RepID=GSTA_ECO57
Glutathione S-transferase {ECO:0000313|EMBL:ESC98758.1}; TaxID=1268977 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113302.;"
71_007_scaffold_62_81
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84645..86147)
DNA (1503bp) protein (501aa)
Dipeptide and tripeptide permease A n=256 Tax=Enterobacteriaceae RepID=A7ZM96_ECO24
amino acid/peptide transporter; K03305 proton-dependent oligopeptide transporter, POT family
Dipeptide and tripeptide permease A {ECO:0000256|HAMAP-Rule:MF_01878}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
71_007_scaffold_62_82
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86430..86630)
DNA (201bp) protein (67aa)
Uncharacterized protein n=274 Tax=Enterobacteriaceae RepID=J7Q7Q8_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDV65442.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
71_007_scaffold_62_83
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(86758..87393)
DNA (636bp) protein (212aa)
nth; endonuclease III; K10773 endonuclease III [EC:4.2.99.18]
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
Endonuclease III n=849 Tax=Enterobacteriaceae RepID=END3_ECOL6
71_007_scaffold_62_84
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(87393..88088)
DNA (696bp) protein (232aa)
Electron transport complex protein RnfE n=515 Tax=Enterobacteriaceae RepID=RNFE_ECO24
rsxE; NADH:ubiquinone oxidoreductase subu nit RnfE; K03613 electron transport complex protein RnfE
Electron transport complex subunit RsxE {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=550676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B185.;"
71_007_scaffold_62_85
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88092..88712)
DNA (621bp) protein (207aa)
Electron transport complex protein RnfG n=414 Tax=Enterobacteriaceae RepID=RNFG_ECOLI
rsxG; electron transport complex protein RnfG; K03612 electron transport complex protein RnfG
Electron transport complex subunit RsxG {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=585395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O103:H2 (strain 12009 / EHEC).;"
71_007_scaffold_62_86
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(88716..89774)
DNA (1059bp) protein (353aa)
Electron transport complex protein RnfD n=339 Tax=Escherichia coli RepID=RNFD_ECO55
rnfD; electron transport complex protein RnfD
Electron transport complex subunit RsxD {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
71_007_scaffold_62_87
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89775..91901)
DNA (2127bp) protein (709aa)
Electron transport complex protein RnfC n=45 Tax=Escherichia coli RepID=RNFC_ECO55
electron transport complex protein RnfC
Electron transport complex subunit RsxC {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=1444223 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-267-03_S4_C1.;"
71_007_scaffold_62_88
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91894..92472)
DNA (579bp) protein (193aa)
Electron transport complex protein RnfB n=759 Tax=Enterobacteriaceae RepID=RNFB_ECO24
electron transport complex protein RnfB; K03616 electron transport complex protein RnfB
Electron transport complex subunit RsxB {ECO:0000256|HAMAP-Rule:MF_00463}; TaxID=1169343 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE24.;"
Displaying items 61-90 of 142 in total

View Taxonomy